Action of trypsin on a nucleoprotein from sturgeon gonads

A nucleoprotein has been isolated from the gonads of the Caspian sturgeon and its composition has been determined. It has been shown that it contains 55% of DNA, 2% of RNA, 36% of protamines, and about 7% of nonprotamine proteins of nonbasic nature. The nucleoprotein has been hydrolyzed with trypsin, and the amino acid compositions of some hydrolysis products have been studied. On the basis of the results obtained, the hypothesis has been put forward of a possible linkage of the DNA with the basic proteins. It has been shown that protamines react with the DNA through the basic amino acid residues located at various regions of their molecules.M. V. Lomonosov Moscow State University. Translated from Khimiya Prirodnykh Soedinenii, No. 4, pp. 549–553, July–August, 1979.     

Adsorption and hydrolytic activity of trypsin on a carboxylate-functionalized cation exchanger prepared from nanocellulose

Immobilization of enzymes on polymer supports has been considered as a powerful technique in biomedical applications. In this study, a cellulose-based hydrogel, poly(acrylic acid)-modified poly(glycidylmethacrylate)-grafted nanocellulose (PAPGNC) was synthesized by graft copolymerization technique and well characterized. A pancreatic serine protease trypsin (TRY) was immobilized onto PAPGNC, under different optimized conditions. The optimum pH for TRY adsorption was found to be 6.5, and the adsorption attained equilibrium within 90 min. The kinetic data were found to follow pseudo-first-order model, which is based on solid capacity. The well agreement of equilibrium data with Langmuir isotherm model confirms the monolayer coverage of TRY onto PAPGNC surface, and the maximum adsorption capacity was found to be 140.65 mg/g at 30 °C. The temperature dependence indicates an endothermic process. The relative activity of immobilized TRY in the hydrolysis of casein was higher than that of the free enzyme over broader temperature ranges. The immobilized TRY had high temperature and long-storage stability as compared to free TRY. Spent adsorbent was effectively degenerated using 0.1 M KSCN with the retention in catalytic activity of 87% even after four cycles. The present investigation shows that PAPGNC is a valuable polymer support for the recovery of TRY from aqueous solutions and subsequent casein hydrolysis.     

Structure of gangliosides from gonads of the starfish Evasterias retifera

Mono- and disialogangliosides were isolated from gonads of the starfish Evasterias retifera. Their structures were elucidated using chemical methods, GC-MS analysis, and enzymatic hydrolysis with neuraminidase. The monosialoganglioside has the structure 8-O-Me-Neu5Gc-23-GalNAc-13-Gal-14-Glc-11-Cer, while the disialoganglioside contains an additional Neu5Ac residue which glycosylates GalNAc in position 6. The lipid moieties of both gangliosides contain phytosphingosine (mainly C_18:0) and two types of fatty acids, unsubstituted (mainly C_16:0 and C_18:0) and -hydroxy acids (mainly -hydroxy-C_16:0).     

An approach for isolation of circulating nucleoprotein complexes from blood

Russian Chemical Bulletin - An approach for isolation of nucleoprotein complexes circulating in plasma and bound to cell surfaces of blood cells is described. This approach relies on binding of...     

Isolation of a third component of stellin — A protamine from the gonads of Acipenser stellatus

Moscow Institute of Applied Biotechnology. Translated from Khimiya Prirodnykh Soedinenii, No. 4, p. 590, July–August, 1991.     

整体固定化酶反应器的研制

制作了微型整体柱型的固定化酶反应器。在500μm内径毛细管内,以乙烯基三甲氧基硅烷处理形成端基烯键,采用原位合成法,以甲基丙烯酸2-羟乙酯为功能单体,以乙二醇二甲基丙烯酸酯为交联剂制备了整体柱。整体柱表面的羟基经NaIO4氧化形成醛基后与胰蛋白酶的氨基进一步反应,实现胰蛋白酶的固定。在24s内,该酶反应器实现了肌红蛋白和细胞色素c的酶解,经MALDI-TOF MS鉴定,序列覆盖率分别达到65%和79%。     

Clinical usefulness of a trypsin radioimmunoassay kit

From the clinical use of RIA-gnost trypsin kit, the following results were obtained. 1. Standard curve showed a steep and good curve was shown. 2. Incubation: The condition for the first incubation was set at the room temperature for 10-24 hours and that for the second incubation at the room temperature for 3-5 hours. With these settings, satisfactory results were obtained. 3. Reproducibility and recovery: The C.V. of the reproducibility and the recovery were considered superior, and the values were below 10% and +/- 3%, respectively. 4. Correlation between trypsin and serum elestase-1: An excellent positive correlation (coefficient of correlation r = 0.889) was shown. 5. Serum trypsin concentration of normal and pancreatic diseases: The normal range was from 100 to 500 ng/ml. Acute pancreatitis rose obviously. Diabetes mellitus and chronic pancreatitis was below 500 ng/ml and the pancreatic cancer showed a tendency to scatter in the range of 50-1,250 ng/ml. The above results indicated that serum trypsin can be easily measured with high precision by using this method. Thus the method is considered useful for the diagnosis of pancreatic diseases.     

Affinity purification of urinary trypsin inhibitor from human urine

Affinity protocols for the purification of urinary trypsin inhibitor (UTI) were developed. To imitate the substrate/inhibitor-binding domain (S1 domain) of trypsin and chymotrypsin, the key amino acid residues were composed to sorbents. The sorbents were then subjected to adsorption analysis with UTI. The purification process consisted of one step of affinity chromatography and another step of ultrafiltration. The purified enzyme was subjected to SDS-PAGE, trypsin inhibitor activity and peptide map fingerprinting analysis. As calculated, the theoretical maximum adsorption (Q(max)) of two affinity sorbents entitled as S-D-G and S-S-G were 31.7 and 30.1 mg/g, respectively; the desorption constants K(d) of the two sorbents were 8.9 and 18.6 μg/mL, respectively. After the separation of UTI with S-D-G and S-S-G, reducing SDS-PAGE analysis revealed that the protein was a single polypeptide with the mass of ~66 kDa, and the purified proteins were ~95 and 97% pure, respectively; the band on gel was further confirmed with peptide map fingerprinting analysis. Protein and bioactivity recoveries were 1.3 and 75.9% with S-D-G, 1.0 and 70.2% with S-S-G, respectively.     

Electrochemical determination of trypsin using a heptapeptide substrate self-assembled on a gold electrode

Microchimica Acta - A simple and sensitive electrochemical method was developed for the determination of trypsin by employing a specific heptapeptide (CRRRRRR) as a substrate. The positively...     

Effect of staining reagent on peptide mass fingerprinting from in-gel trypsin digestions: a comparison of SyproRuby and DeepPurple

As the new fluorescent stains such as SyproRuby and DeepPurple are getting widespread recognition for proteome analyses by the traditional 2-D gel method, it becomes important to test the feasibility of these stains with respect to staining reproducibility, protein quantitation, and compatibility of the stain with downstream MS. The binding of epicocconone, active ingredient of DeepPurple, to one of the primary cleavage sites of trypsin (lysine residue) raises the possibility of incomplete cleavage and interference with PMF. However, the current study tests and concludes that the DeepPurple stain can result in increased peptide recovery compared to SyproRuby stain and can improve MS-based identification of lower intensity proteins spots.     

Humidity adsorption kinetics of a trypsin gel film

This study focuses on the humidity adsorption kinetics of an isopropanol-induced and pH-triggered bovine pancreatic trypsin gel (BPTG). The BPTG was adsorbed on a gold coated Quartz Crystal Microbalance (QCM) substrate with a thickness of 376 nm. The morphology of the film was characterized using Atomic Force Microscopy (AFM). QCM was used to investigate the humidity sensing properties of the BPTG film. The response of the humidity sensor was explained using the Langmuir model. The average values of adsorption and desorption rates between 11% RH (relative humidity) and 97% RH were calculated as 2482.5 M(-1) s(-1) and 0.02 s(-1), respectively. The equilibrium constant and average Gibbs Free Energy of humidity adsorption and desorption cycles were obtained as 133,000 and -11.8 kJ/mol, respectively.     

Direct evaluation of a mechanism for activation of the RecA nucleoprotein filament

The RecA protein of Escherichia coli controls the SOS response for DNA damage tolerance and plays a crucial role in recombinational DNA repair. The formation of a RecA.ATP.ssDNA complex initiates all RecA activities, and yet this process is not understood at the molecular level. An analysis of RecA.DNA interactions was performed using both a mutant RecA protein containing a tryptophan (Trp) reporter and oligodeoxyribonucleotides (ODNs) containing a fluorescent guanine analogue, 6-methylisoxanthopterin (6MI). Experiments using fluorescent ODNs allowed structurally distinct nucleoprotein filaments, formed in the absence and presence of ATPgammaS (a slowly hydrolyzed analogue of ATP), to be differentiated directly. Stopped-flow spectrofluorometry, combined with presteady-state kinetic analyses, revealed unexpected differences in the rates of RecA.ODN and RecA.ATPgammaS.ODN complex assembly. This is the first demonstration that such intrinsically fluorescent synthetic DNAs can be used to characterize definitively the real-time assembly and activation of RecA.ssDNA complexes. Surprisingly, the ssDNA binding event is almost 50-fold slower in the presence of the activating ATPgammaS cofactor. Furthermore, a combination of time-dependent emission changes from 6MI and Trp allowed the first direct chemical test of whether an inactive filament can isomerize to the active state. The results revealed that, unlike the hexameric motor proteins, the inactive RecA filament cannot directly convert to the active state upon ATPgammaS binding. These results have implications for understanding how a coincidence of functions--an ATP-communicated signal-like activity and an ATP-driven motorlike activity--are resolved within a single protein molecule.     

Mechanisms of tannin-induced trypsin inhibition: a molecular approach

Association of procyanidins with enzymes has drawn attention over the past few years. This work aimed to bring insights on interaction of the protease trypsin with the procyanidin dimer (B3). This interaction was characterized by fluorescence quenching, saturation transfer difference (STD) NMR, molecular modeling, and through an enzymatic inhibition assay. Further studies were conducted regarding the influence of pectin on the binding process. A general overview of the binding process may be outlined as follows: a) at low procyanidin concentrations (below the critical micellar concentration-(CMC)) a specific interaction probably driven by hydrogen bonds between the protein backbone and the procyanidin occurs and is associated with the reduction of both enzyme activity and fluorescence; b) at high procyanidin concentration (above the CMC) the interaction becomes nonspecific. This variation in both nature and extent of the interaction with the variation of procyanidin concentration shows how tannin self-association may affect the interaction between tannins and proteins. It was also shown that the mechanism through which pectin affects the interaction between procyanidin B3 and trypsin is of a competitive type.     

An investigation of phenolic compounds from plant sources as trypsin inhibitors

In the search of new trypsin inhibitors caffeic acid (1), cinnamic acid (2), gallic acid (3) and eugenol (4) from Cinnamomum zeylanicum, ferulic acid (5) from Impatiens bicolor, vanillin (6) from Melia azedarach and catechol (7) from Allium cepa were isolated through bioassay guided fractionation of the plant extracts. IC (50) values of the compounds 1, 2 and 5 were found to be 0.35?±?0.02?mM, 0.96?±?0.05?mM and 1.22?±?0.06?mM, respectively. Lineweaver-Burk and Dixon plots and their secondary replots showed that 1 was non-competitive inhibitor of this enzyme with K(i) value 0.102?±?0.006?mM.