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1.
We recently reported an algorithm to count Kekulé (resonance) structures for convex cyclofusenes using a combinatorial/geometric approach. Previously, we presented an algorithm for counting resonance structures for parallelogram-like benzenoids with holes by counting descending paths using rectangular meshes with holes. In this article, we employ a similar combinatorial/geometric approach to determine algorithms that will facilitate counting of the resonance structures in parallelogram-like benzenoids with no holes.  相似文献   

2.
《Chemical physics letters》1987,136(2):141-144
It is known that an alternative algorithm to the Gordon-Davidson algorithm for counting the Kekulé valence structures of catacondensed non-branched benzenoid hydrocarbons is a reformulation of the original algorithm.  相似文献   

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The concept of numerical Kekulé structures is used for coding and ordering geometrical (standard) Kekulé structures of several classes of polycyclic conjugated molecules: catacondensed, pericondensed, and fully arenoid benzenoid hydrocarbons, thioarenoids, and [N]phenylenes. It is pointed out that the numerical Kekulé structures can be obtained for any class of polycyclic conjugated systems that possesses standard Kekulé structures. The reconstruction of standard Kekulé structures from the numerical ones is straightforward for catacondensed systems, but this is not so for pericondensed benzenoid hydrocarbons. In this latter case, one needs to use two codes to recover the geometrical Kekulé structures: the Wiswesser code for the benzenoid and the numerical code for its Kekulé structure. There is an additional problem with pericondensed benzenoid hydrocarbons; there appear numerical Kekulé structures that correspond to two (or more) geometrical Kekulé structures. However, this problem can also be resolved.  相似文献   

5.
A fast computer algorithm brings computation of the permanents of sparse matrices, specifically, molecular adjacency matrices. Examples and results are presented, along with a discussion of the relationship of the permanent to the Kekulé structure count. A simple method is presented for determining the Kekulé structure count of alternant hydrocarbons. For these hydrocarbons, the square of the Kekulé structure count is equal to the permanent of the adjacency matrix. In addition, for alternant structures the adjacency matrix for N atoms can be written in such a way that only an N/2 × N/2 matrix need be evaluated. The Kekulé structure count correlates with topological indices. The inclusion of the number of cycles improves the fit. When comparing with previous results, the variance decreases 74%. The calculated standard heat of formation correlates with the logarithm of the Kekulé structure count. This heat increments 349 kJ/mol each time the Kekulé structure count increases by one order of magnitude. © 2002 Wiley Periodicals, Inc. Int J Quantum Chem, 2002  相似文献   

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7.
For a Kekulé structure we consider the smallest number of placements of double bonds such that the full Kekulé structure on the given parent graph is fully determined. These numbers for each Kekulé structure of the parent graph sum to a novel structural invariant F, called the degree of freedom of the graph. Some qualitative characteristics are identified, and it is noted that apparently it behaves differently from a couple of other invariants related to Kekulé structures.  相似文献   

8.
By assigning two pi-electrons of CC double bonds in a Kekulé valence structure to a benzene ring if not shared by adjacent rings and one pi-electron if CC double bond is shared by two rings we arrived at numerical valence formulas for benzenoid hydrocarbons. We refer to numerical Kekulé formulas as algebraic Kekulé valence formulas to contrast them to the traditional geometrical Kekulé valences formulas. The average over all numerical Kekulé valence structures results in a single numerical structure when a benzenoid hydrocarbon molecule is considered. By ignoring numerical values the novel quantitative formula transforms into a qualitative one which can replace incorrectly used notation of pi-electron sextets to indicate aromatic benzenoids by placing inscribed circles in adjacent rings-which contradicts Clar's characterization of benzenoid hydrocarbons.  相似文献   

9.
Let G be a (molecule) graph. A perfect matching, or Kekulé structure of G is a set of independent edges covering every vertex exactly once. Enumeration of Kekulé structures of a (molecule) graph is interest in chemistry, physics and mathematics. In this paper, we focus on some polyominos on the torus and obtain the explicit expressions on the number of the Kekulé structures of them.  相似文献   

10.
Kekulé indices and conjugated circuits are computed for 36 Kekulé structures, together with two VB quantities associated with the corresponding factor graphs (previously called submolecules). These latter quantitites are nonadjacent numbers of Hosoya and the reciprocal of the connectivity indices of Randi?. It was found that the index of Hosoya successfully orders a set of Kekulé structures belonging to the same hydrocarbon in a parallel order as their Kekulé indices and branching indices. This substantiates the relation between VB and MO theories. A code is derived by summing contributions of nonadjacent numbers in all Kekulé stuctures of a hydrocarbon. The order of the resulting codes is found to be identical to the order of the molecular properties (resonance energies, π-energies, and eigenvalues) of the hydrocarbons.  相似文献   

11.
The Zhang–Zhang polynomial (i.e., Clar covering polynomial) of hexagonal systems is introduced by H. Zhang and F. Zhang, which can be used to calculate many important invariants such as the Clar number, the number of Kekulé structures and the first Herndon number, etc. In this paper, we give out an explicit recurrence expression for the Zhang–Zhang polynomials of the cyclo-polyphenacenes, and determine their Clar numbers, numbers of Kekulé structures and their first Herndon numbers.  相似文献   

12.
The concept of aromaticity was first invented to account for the unusual stability of planar organic molecules with 4n + 2 delocalized pi electrons. Recent photoelectron spectroscopy experiments on all-metal MAl(4)(-) systems with an approximate square planar Al(4)(2-) unit and an alkali metal led to the suggestion that Al(4)(2-) is aromatic. The square Al(4)(2-) structure was recognized as the prototype of a new family of aromatic molecules. High-level ab initio calculations based on extrapolating CCSD(T)/aug-cc-pVxZ (x = D, T, and Q) to the complete basis set limit were used to calculate the first electron affinities of Al(n)(), n = 0-4. The calculated electron affinities, 0.41 eV (n = 0), 1.51 eV (n = 1), 1.89 eV (n = 3), and 2.18 eV (n = 4), are all in excellent agreement with available experimental data. On the basis of the high-level ab initio quantum chemical calculations, we can estimate the resonance energy and show that it is quite large, large enough to stabilize Al(4)(2-) with respect to Al(4). Analysis of the calculated results shows that the aromaticity of Al(4)(2-) is unusual and different from that of C(6)H(6). Particularly, compared to the usual (1-fold) pi aromaticity in C(6)H(6), which may be represented by two Kekulé structures sharing a common sigma bond framework, the square Al(4)(2-) structure has an unusual "multiple-fold" aromaticity determined by three independent delocalized (pi and sigma) bonding systems, each of which satisfies the 4n + 2 electron counting rule, leading to a total of 4 x 4 x 4 = 64 potential resonating Kekulé-like structures without a common sigma frame. We also discuss the 2-fold aromaticity (pi plus sigma) of the Al(3)(-) anion, which can be represented by 3 x 3 = 9 potential resonating Kekulé-like structures, each with two localized chemical bonds. These results lead us to suggest a general approach (applicable to both organic and inorganic molecules) for examining delocalized chemical bonding. The possible electronic contribution to the aromaticity of a molecule should not be limited to only one particular delocalized bonding system satisfying a certain electron counting rule of aromaticity. More than one independent delocalized bonding system can simultaneously satisfy the electron counting rule of aromaticity, and therefore, a molecular structure could have multiple-fold aromaticity.  相似文献   

13.
We have outlined novel graph theoretical model for computing π‐electron currents in π‐electron polycyclic conjugated hydrocarbons. We start with Kekulé valence structures of a polycyclic conjugated hydrocarbon and their conjugated circuits. To each 4n+2 conjugated circuits we assign counter clockwise current i and to each 4n conjugated circuit we assign clockwise current i. By adding the contributions from all conjugated circuits in a single Kekulé valence structure one obtains π‐electron current pattern for the particular Kekulé valence structure. By adding the conjugated circuit currents in all Kekulé valence structure one obtains the pattern of π‐electron currents for considered molecule. We report here π‐electron current patters for coronene and 17 its isomers, which have been recently considered by Balaban et al., obtained by replacing one or more pairs of peripheral benzene rings with five and seven member rings. Our results are compared with their reported π‐electron current density patters computed by ab initio molecular orbital (MO) computations and satisfactory parallelism is found between two so disparate approaches. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012  相似文献   

14.
In this article, we consider partitioning of the analytical expression for resonance energy (RE) in smaller benzenoid hydrocarbons, to individual benzenoid rings of polycyclic molecules. The analytical expression for molecular RE, available since 1976, is given by the count of all linearly independent conjugated circuit in all Kekulé structures in a molecule. Analytical expression for local ring RE (RRE) is given by counting all linearly independent conjugated circuits involving single benzenoid ring in all Kekulé structures, which when added, gives the molecular RE. If for benzene ring the RRE is taken to be 1.000, rings in polycyclic benzenoid hydrocarbons have their ring RRE, which give the degree of their local aromaticity, smaller than 1.000. The difference to 1.000 is a measure of the similarity of a ring to benzene in this one-dimensional (1-D) representation of local aromaticities of benzenoid hydrocarbons. The plot of RRE against the distance of the same ring from benzene in the Local Aromaticity Map, in which benzenoid rings are characterized ring bond orders and average variations of adjacent CC bonds, shows linear correlation (with r = 0.91), reducing the local aromaticity in benzenoid hydrocarbons to 1-D molecular property. © 2018 Wiley Periodicals, Inc.  相似文献   

15.
Heats of atomization for a range of conjugated molecules containing nitrogen or oxygen are calculated by a semiempirical method that combines some features of both the MO and VB theories. The π ground state of each conjugated molecule is represented as a linear combination of Kekulé structures. Unlike in the VB theory, each Kekulé structure is a determinant containing bond orbitals. Here experimental heats of atomization are reproduced approximately as well as by the more sophisticated SCF –MO approach. The use of this method is, however, much simpler since it amounts to a single diagonalization of a matrix of the order equal to the number of Kekulé structures only.  相似文献   

16.
A Kekulé structure for a benzenoid or a fullerene $\Gamma $ is a set of edges $K$ such that each vertex of $\Gamma $ is incident with exactly one edge in $K$ , i.e. a perfect matching. All fullerenes admit a Kekulé structure; however, this is not true for benzenoids. In this paper, we develop methods for deciding whether or not a given benzenoid admits a Kekulé structure by constructing Kekulé structures that have a high density of benzene rings. The benzene rings of the Kekulé structure $K$ are the faces in $\Gamma $ that have exactly three edges in $K$ . The Fries number of $\Gamma $ is the maximum number of benzene rings over all possible Kekulé structures for $\Gamma $ and the set of benzene rings giving the Fries number is called a Fries set. The Clar number is the maximum number of independent benzene rings over all possible Kekulé structures for $\Gamma $ and the set of benzene rings giving the Clar number is called a Clar set. Our method of constructing Kekulé structures for benzenoids generally gives good estimates for the Clar and Fries numbers, often the exact values.  相似文献   

17.
A novel graph-theoretical approach for ordering Kekulé valence structures of benzenoid hydrocarbons is presented. The approach involves the transformation of the Kekulé structures into the subspaces of their individual double bonds. The submolecules generated in this way [H. Joela, Theor. Chim. Acta 39 , 241 (1975)] are ordered according to suitable connectivity indices. The resulting orders parallel those predicted from the so called Kekulé indices [A. Graocvac, I. Gutman, M. Randi?, and N. Trinajst?, J. Am. Chem. Soc. 95 , 6267 (1973)]. A relation is thus illustrated between VB and MO theories. The method is new and allows the prediction of the relative stabilities of structures from purely combinatorial vent without resort to computer.  相似文献   

18.
19.
We developed a theoretical method for studying the aromatic stability of large molecules, molecules having a dozen and more fused benzene rings. Such molecules have so far often been outside the domain of theoretical studies. Combining the statistical approach and a particular graph theoretical analysis, it is possible to derive the expressions for molecular resonance energy for molecules of any size. The basis of the method is enumeration of conjugated circuits in random Kekulé valence structures. The method has been applied to evaluation of the resonance energies of conjugated hydrocarbons having about a dozen fused benzene rings. The approach consists of (1) construction of random Kekulé valence structures, (2) enumeration of conjugated circuits within the generated random valence structures, and (3) application of standard statistical analysis to a sufficiently large sample of structures. The construction of random valence forms is nontrivial, and some problems in generating random structures are discussed. The random Kekulé valence structures allow one not only to obtain the expression for molecular resonance energies (RE ) and numerical estimates for RE , but also they provide the basis for discussion of local molecular features, such as ring characterization and Pauling bond orders.  相似文献   

20.
The Herndon–Simpson model for a particular catacondensed polyphene chain is considered as a nontrivial many-body Hamiltonian, defined on a space with a basis of orthonormal Kekulé structures. An Explicitly correlated cluster expanded resonance–theoretic wave function is described for this model, and its quality is judged by calculation of the standard deviation for the energy expectation. The quality is found to be high. Indeed, for a particular parameter ratio within the range of experimental interest, the wave function ansatz is found to be exact. This very accurate solution is then used to gauge the quality of the common ansatz with equally weighted Kekulé structures, and it is found to be reasonably good.  相似文献   

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