乙二醇的分子间氢键结构动力学的飞秒非线性红外光谱

利用稳态线性红外光谱和飞秒泵浦-探测红外光谱技术, 研究了在乙腈(MeCN)、丙酮(AC)、四氢呋喃(THF)和二甲基亚砜(DMSO)溶剂中乙二醇(EG)的结构和羟基(―OH)伸缩振动动力学. 结果表明, 乙二醇的―OH伸缩振动的频率位置、峰宽以及振动弛豫动力学都表现出强烈的溶剂依赖性. 乙二醇溶液中至少存在两种形式的分子间氢键, 一种是溶质-溶剂团簇的分子间氢键, 另一种是溶质-溶质团簇的分子间氢键. 量子化学计算预测的―OH伸缩振动频率的溶剂依赖性与我们的红外光谱实验观测结果一致. 进一步, 我们发现在乙腈中参与形成溶质-溶剂团簇氢键的乙二醇―OH伸缩振动具有最慢的弛豫动力学, 丙酮和四氢呋喃次之, 而最快的弛豫动力学过程发生在二甲基亚砜中. 在每一溶剂条件下, 乙二醇/乙二醇溶质团簇中―OH伸缩振动弛豫都更快一些. 本文结果有助于认识在溶质-溶质、溶质-溶剂分子团簇共存的体系中不同分子间氢键的结构动力学特性.     

湿法合成尿素-氯化胆碱低共熔溶剂中铜锰氧化物的制备

研究了尿素-氯化胆碱低共熔溶剂DES的制备方法.通过监控制备过程中折光率、电导率和密度等性质指标的变化,考察了尿素-氯化胆碱DES合成规律及影响因素.采用红外光谱表征了所合成DES的分子结构.使用AMS软件中COSMO-RS模块对DES其中的尿素和氯化胆碱分子中的表面电荷密度分布进行了模拟,剖析了氢键作用机制.比较了干...     

电子给受体复合物中电荷转移吸收光谱和溶剂效应

用MP2/6-31G^**方法研究了二氯甲烷溶剂分子与电子给体、受体以及电子给受体复合物间的相互作用,结果表明,二氯甲烷与电子受体和电子给受体复合物间有弱氢键相互作用.利用CIS/6-31++G^**方法研究了溶剂与溶质分子间形成氢键对激发态的影响.自然键电荷分析表明,电子给受体复合物的S₀→S₁跃迁导致一个电子从电子给体转移到受体.结合非平衡溶剂化处理和自洽反应场方法研究了溶剂分子与复合物间形成氢键时的电荷转移吸收光谱.计算表明氢键作用导致复合物的电荷转移吸收光谱蓝移.     

有机π共轭配体溶剂化效应与分子间相互作用的理论研究

采用可极化的连续介质模型(PCM), 运用密度泛函理论(DFT), 在B3LYP/6-31+G^**水平下研究了溶剂极性对有机π共轭配体N,N'-Bis-(3-pyridyl)ethylene-bis-urea(BPEBU)中syn-anti构象的分子几何和电子结构的影响, 并借助分子动力学模拟的方法, 采用明确溶剂模型研究了溶质-溶剂分子间的相互作用. 密度泛函理论计算结果表明, 随着溶剂极性的增强, BPEBU中尿素基上的CO键和N-H键以及吡啶环上的C-N键被明显极化, 使羰基氧原子和吡啶氮原子的电负性明显增强, 尿素基的N-H键上氢原子的正电荷也显著增加. 分子动力学模拟统计的结果表明, 在极性较强的乙醇溶液中, 有明确的O…H-O, N…H-O和N-H…O等3种氢键作用存在, 而在丙酮溶液中, 只有N…H-O一种氢键作用存在, 而且与乙醇溶液中的N…H-O作用相比要弱些. 另外, 采用密度泛函理论方法结合连续/明确的混合溶剂模型, 优化得到了溶质-溶剂三聚体的超分子簇结构, 与分子动力学模拟的第一溶剂层中的超分子结构相比, 两者定性一致.     

非极性共轭分子电子光谱的溶剂效应——蒽在各种溶剂中的紫外吸收光谱

Kundt找出溶质分子的吸收谱带随溶剂色散率的增加而向长波移动的规则,可用下式表示: △v=v_(气体)-v_(溶液)=K_1(n-1)(1) 其中n为溶剂的折光指数.许多学者曾争论这规则的正确性,甚至予以全部否定.经多年研究后,人们才对溶剂与溶质分子间的作用有较全面的了解,才认识只有在溶质分子是非极性,而且在它们与溶剂分子之间又无氢键的情况下,则它们的谱带位移△v才有可能完全决定于溶质-溶剂分子间的色散作用.     

β-联碳酰基类衍生物有序自组装膜的STM研究

在大气条件下, 利用扫描隧道显微镜研究了四个β-联碳酰基类衍生物在高定向裂解石墨(HOPG)表面的自组装结构. 研究分子的结构中均包含π电子共轭体系和烷基链. 实验研究了分子结构对自组装结构的影响, 并利用分子结构的变化实现了自组装膜结构的调控. 结果表明, 在甲苯溶剂中制备的这些自组装结构均长程有序, 分子间氢键和偶极相互作用是影响自组装膜结构变化的重要因素.     

N-乙酰-L-酪氨酸乙酯偶氮衍生物的合成及偶氮-腙互变异构性质

以N-乙酰-L-酪氨酸乙酯为原料,与6个取代芳胺重氮盐在碱性条件下发生偶合反应,合成了6个新型的N-乙酰-L-酪氨酸乙酯偶氮衍生物,结构通过IR、~1H NMR进行了表征.探讨了所合成化合物的偶氮式-腙式互变异构以及溶剂和pH对紫外可见光谱的影响.结果表明,溶质-溶剂相互作用会影响化合物在不同溶剂的λmax发生微小的变化,分子内和分子间氢键的作用影响较大.溶液pH会直接影响偶氮式-腙式的平衡构成,随着pH的增加,腙式在偶氮-腙互变异构平衡中的比例逐渐增加.这些偶氮化合物有望成为一类潜在的pH指示剂.     

丙酮分子n→π%*跃迁光谱的平均溶剂静电势/分子动力学方法研究

采用量子力学/分子动力学方法研究了具体溶剂分子结构对溶质光谱行为的静电影响. 通过拟合溶质所处外电场和引入溶剂分子极化率, 考虑了溶质溶剂分子之间的相互极化效应, 得到合理的溶质和溶剂分子的电荷分布. 经过严格推导发现, 在传统的显溶剂模型中, 平衡和非平衡溶剂化能表达式均未考虑溶剂分子永久偶极弹簧能的贡献. 因此, 在正确计算永久偶极弹簧能的基础上, 重新建立了溶剂化能的表达式和新的吸收/发射光谱移动公式. 采用修改后的ASEP/MD程序, 计算得到了与实验值比较吻合的丙酮在水溶液中n→π*跃迁的光谱移动值, 验证了新公式的合理性.     

醇类溶剂溶剂化显色极性的理论分析

对一系列醇类溶剂分子进行了理论计算,运用多元线性回归分析方法从分子间相互作用的角度对四种溶剂化显色极性参数(E~T^N,π^*,Py和SPP)进行了理论分析。结果表明,对醇类溶剂而言,参数E~T^N和SPP实质上主要反映的是溶剂的氢键酸性性质;参数π^*中虽然包含了溶剂的极性因素,但同时与溶质-溶剂分子间的电荷转移相互作用有着密切的关系;而参数Py则较好地反映了溶剂的极性性质。     

具有生物活性的N-苯基-N'-(1,3-噻唑-2-基)-1,2,3-苯并噻二唑-7-甲脒的 晶体结构与理论计算

本文设计合成了一种新的植物激活剂先导化合物的衍生物N-苯基-N′-(1,3-噻唑-2-基)-1,2,3-苯并噻二唑-7-甲脒,并进行了元素分析、1HNMR、IR和MS测定。采用密度泛函理论在B3LYP/6-311 +G*水平上对该化合物进行了分子几何结构全优化和频率计算,计算表明,该分子结构中存在N－H···N分子内氢键,从而使分子更加稳定;计算结果还得到分子的红外与拉曼光谱以及不同溶剂相下的电子吸收光谱和不同温度下的热力学性质,为该类化合物构效关系的研究奠定了基础。     

Effect of hydrophobicity of monomers on the structures and properties of 1,3:2,4-dibenzylidene-D-sorbitol organogels and polymers prepared by templating the gels

The effects of hydrophobicity of monomers on the structures and properties of 1,3:2,4-dibenzylidene-D-sorbitol (DBS) organogels and nanostructured polymers prepared by templating the self-assembled organogels were investigated in this study. Hydrophobic styrene (St), hydrophilic methyl (methacrylate) (MMA), and their mixtures were chosen as the monomers. Though the gelation time varied, the average diameters (around 10 nm) of DBS nanofibrils found in the resulting organogels did not change significantly, for monomers of different hydrophobicity, as observed by transmission electron microscopy (TEM). Nonetheless, new structures, DBS microaggregates, appeared when the MMA content in the monomers was high enough. These irregular, micrometer-sized DBS structures (microaggregates) may have formed because the aggregated DBS molecules were influenced by the MMA monomers, due to the hydrogen bonding between DBS and MMA. This was confirmed by Fourier transform infrared (FTIR) spectroscopy and could also explain the differences in the gelation time of the DBS organogels: gels form more slowly in MMA than in St because of the competing interaction, hydrogen bonding, between DBS and MMA. Subsequently, we thermally initiated the free-radical polymerization of these St/MMA co-monomers. PS/PMMA copolymers were obtained, and no macroscopic phase separation occurred after the polymerization. Finally, the porous structures of the polymers produced by the solvent extraction of the DBS templates were observed, using TEM.     

Structure, energy, and IR spectra of I2*-.nH2O clusters (n=1-8): a theoretical study

The authors report theoretical results on structure, bonding, energy, and infrared spectra of iodine dimer radical anion hydrated clusters, I(2) (-).nH(2)O (n=1-8), based on a systematic study following density functional theory. Several initial guess structures are considered for each size cluster to locate minimum energy conformers with a Gaussian 6-311++G(d,p) split valence basis function (triple split valence 6-311 basis set is applied for iodine). It is observed that three different types of hydrogen bonded structures, namely, symmetrical double hydrogen bonding, single hydrogen bonding, and interwater hydrogen bonding structures, are possible in these hydrated clusters. But conformers having interwater hydrogen bonding arrangements are more stable compared to those of double or single hydrogen bonded structures. It is also noticed that up to four solvent H(2)O units can reside around the solute in interwater hydrogen bonding network. At the maximum six H(2)O units are independently linked to the dimer anion having four double hydrogen bonding and two single hydrogen bonding, suggesting the hydration number of I(2) (-) to be 6. However, conformers having H(2)O units independently linked to the iodine dimer anion are not the most stable structures. In all these hydrated clusters, the odd electron is found to be localized over two I atoms and the two atoms are bound by a three-electron hemi bond. The solvation, interaction, and vertical detachment energies are calculated for all I(2) (-).nH(2)O clusters. Energy of interaction and vertical detachment energy profiles show stepwise saturation, indicating geometrical shell closing in the hydrated clusters, but solvation energy profile fails to show such behavior. A linear correlation is observed between the calculated energy of interaction and vertical detachment energy. It is observed that formation of I(2) (-)-water cluster induces significant shifts from the normal O-H stretching modes of isolated H(2)O. However, bending mode of H(2)O remains insensitive to the successive addition of solvent H(2)O units. Weighted average energy profiles and IR spectra are reported for all the hydrated clusters based on the statistical population of individual conformers at room temperature.     

Halogen Bonding or Hydrogen Bonding between 2,2,6,6-Tetramethyl-piperidine-noxyl Radical and Trihalomethanes CHX3 (X=Cl,Br, I)

The halogen and hydrogen bonding complexes between 2,2,6,6-tetramethylpiperidine-noxyl and trihalomethanes (CHX₃, X=Cl, Br, I) are simulated by computational quantum chem-istry. The molecular electrostatic potentials, geometrical parameters and interaction energy of halogen and hydrogen bonding complexes combined with natural bond orbital analysis are obtained. The results indicate that both halogen and hydrogen bonding interactions obey the order Cl相似文献   

Computational approach to nuclear magnetic resonance in 1-Alkyl-3-methylimidazolium ionic liquids

A quantum-chemical computational approach to accurately predict the nuclear magnetic resonance (NMR) properties of 1-alkyl-3-methylimidazolium ionic liquids has been performed by the gauge-including atomic orbitals method at the B3LYP/6-31++G** level using different simulated ionic liquid environments. The first molecular model chosen to describe the ionic liquid system includes the gas-phase optimized structures of ion pairs and separated ions of a series of imidazolium salts containing methyl, butyl, and octyl substituents and PF6-, BF4-, and Br- anions. In addition, a continuum polarizable model of solvation has been applied to predict the effects of the medium polarity on the molecular properties of 1,3-dimethylimidazolium hexafluorophosphate (MmimPF6). Furthermore, the specific acidic and basic solute-solvent interactions have been simulated by a discrete solvation model based on molecular clusters formed by MmimPF6 species and a discrete number of water molecules. The computational prediction of the NMR spectra allows a consistent interpretation of the dispersed experimental evidence in the literature. The following are main contributions of this work: (a) Theoretical results state the presence of a chemical equilibrium between ion-pair aggregates and solvent-separated counterions of 1-alkyl-3-methylimidazolium salts which is tuned by the solvent environment; thus, strong specific (acidic and basic) and nonspecific (polarity and polarizability) solvent interactions are predicted favoring the dissociated ionic species. (b) The calculated 1H and 13C NMR properties of these ionic liquids are revealed as highly dependent on the nature of solute-solvent interactions. Thus, the chemical shift of the hydrogen atom in position two of the imidazolium ring is deviated to high values by the specific interactions with water molecules, whereas nonspecific interaction with water (as a solvent) affects, in the opposite direction, this 1H NMR parameter. (c) Last, current calculations support the presence of hydrogen bonding between counterions, suggesting the importance of this interaction in the properties of the solvent in the 1-alkyl-3-methylimidazolium ionic liquids.     

Organometallic crystal engineering of [(1,4- and 1,3-hydroquinone)Rh(P(OPh)3)2]BF4 by charge assisted hydrogen bonding

The ionic complexes [(1,4- and 1,3-hydroquinone)Rh(P(OPh)3)2]BF4 form porous organometallic structures dictated by charge assisted hydrogen bonding.     

Selective recognition of cyanide anion via formation of multipoint NH and phenyl CH hydrogen bonding with acyclic ruthenium bipyridine imidazole receptors in water

Five imidazole-based anion receptors A-E are designed for cyanide anion recognition via hydrogen bonding interaction in water. Only receptors A [Ru(bpy)(2)(mpipH)](ClO(4))(2) (bpy is bipyridine and mpipH is 2-(4-methylphenyl)-imidazo[4,5-f]-1,10-phenanthroline) and E [Ru(2)(bpy)(4)(mbpibH(2))](ClO(4))(4) (mbpibH(2) is 1,3-bis([1,10]-phenanthroline-[5,6-d]imidazol-2-yl)benzene) selectively recognize CN(-) from OAc(-), F(-), Cl(-), Br(-), I(-), NO(3)(-), HSO(4)(-), ClO(4)(-), H(2)PO(4)(-), HCO(3)(-), N(3)(-), and SCN(-) anions in water (without organic solvent) at physiological conditions via formation of multiple hydrogen bonding interaction with binding constants of K(A(H2O)) = 345 ± 21 and K(E(H2O)) = 878 ± 41, respectively. The detection limits of A and E toward CN(-) in water are 100 and 5 μM, respectively. Receptor E has an appropriate pK(a2)* value (8.75) of N-H proton and a C-shape cavity structure with three-point hydrogen bonding, consisting of two NH and one cooperative phenyl CH hydrogen bonds. Appropriate acidity of N-H proton and multipoint hydrogen bonding are both important in enhancing the selectivity and sensitivity toward CN(-) in water. The phenyl CH···CN(-) hydrogen bonding interaction is observed by the HMBC NMR technique for the first time, which provides an efficient approach to directly probe the binding site of the receptor toward CN(-). Moreover, CN(-) induced emission lifetime change of the receptor has been exploited in water for the first time. The energy-optimized structure of E-CN adduct is also proposed on the basis of theoretical calculations.     

Evaluation of the Polymerization and Recognition Mechanism for Phenol Imprinting SPE

In order to develop more efficient preparation technologies for imprinted polymers (MIPs), the nature of pre-polymerization and molecular recognition in MIP was investigated by molecular dynamics modeling (MD), ¹H NMR, FTIR and some indirect techniques. Phenol was used as the template for the study of mechanism through the analysis of hydrogen bonding, hydrophobic and π–π bonding interaction. The 4-vinylpyridine-based MIP had the highest selectivity to its phenol template. Hydrogen bonding was proved to be present by characterizing the pre-polymerization complex and evaluating the recognition process and the effects of rebinding solvents were also studied. It was found that a good rebinding solvent should have less affinity with both template and polymer, but good solubility. MD modeling and some indirect techniques demonstrated that 4-vinylpyridine-based MIP recognized phenol mainly through hydrophobic interactions when the rebinding medium was water, while hydrogen bonding was present in the recognition process when the rebinding solvent was n-hexane.     

Intramolecular O―H⋯O and C―H⋯O hydrogen bond cooperativity in D‐glucopyranose and D‐galactopyranose—A DFT/GIAO,QTAIM/IQA,and NCI approach

Density functional theory calculations are used to compute proton nuclear magnetic resonance (NMR) chemical shifts, interatomic distances, atom–atom interaction energies, and atomic charges for partial structures and conformers of α‐D‐glucopyranose, β‐D‐glucopyranose, and α‐D‐galactopyranose built up by introducing OH groups into 2‐methyltetrahydropyran stepwisely. For the counterclockwise conformers, the most marked effects on the NMR shift and the charge on the OH1 proton are produced by OH2, those of OH3 and OH4 being somewhat smaller. This argues for a diminishing cooperative effect. The effect of OH6 depends on the configuration of the hydroxymethyl group and the position, axial or equatorial, of OH4, which controls hydrogen bonding in the 1,3‐diol motif. Variations in the interaction energies reveal that a “new” hydrogen bond is sometimes formed at the expense of a preexisting one, probably due to geometrical constraints. Whereas previous work showed that complexing a conformer with pyridine affects only the nearest neighbour, successive OH groups increase the interaction energy of the N⋯H1 hydrogen bond and reduce its length. Analogous results are obtained for the clockwise conformers. The interaction energies for C―H⋯OH hydrogen bonding between axial CH protons and OH groups in certain conformers are much smaller than for O―H⋯OH bonds but they are largely covalent, whereas those of the latter are predominantly coulombic. These interactions are modified by complexation with pyridine in the same way as O―H⋯OH interactions: the computed NMR shifts of the CH protons increase, the atom–atom distances are shorter, and interaction energies are enhanced.     

Hydrogen bond stabilization in 1,3-dimethylimidazolium methyl sulfate and 1-butyl-3-methylimidazolium hexafluorophosphate probed by high pressure: the role of charge-enhanced C-H...O interactions in the room-temperature ionic liquid

The hydrogen bonding structures of room-temperature ionic liquids 1,3-dimethylimidazolium methyl sulfate and 1-butyl-3-methylimidazolium hexafluorophosphate have been studied by infrared spectroscopy. High-pressure infrared spectral profiles and theoretical calculations allow us to make a vibrational assignment of these compounds. The imidazolium C-H bands of 1,3-dimethylimidazolium methyl sulfate display anomalous non-monotonic pressure-induced frequency shifts. This discontinuity in frequency shift is related to enhanced C-H...O hydrogen bonding. This behavior is in contrast with the trend of blue shifts in frequency for the methyl C-H stretching mode at ca. 2960 cm(-1). Our results indicated that the imidazolium C-H groups are more favorable sites for hydrogen bonding than the methyl C-H groups in the pure 1,3-dimethylimidazolium methyl sulfate. Nevertheless, both methyl C-H and imidazolium C-H groups are favorable sites for C-H...O hydrogen bonding in a dilute 1,3-dimethylimidazolium methyl sulfate/D(2)O mixture. Hydrogen bond-like C-H...F interactions were observed between PF(6)(-) and H atoms on the alkyl side chains and imidazolium ring for 1-butyl-3-methylimidazolium hexafluorophosphate.     

Effects of methyl substitution on radiative and solvent quenching rate constants of [Ru(phen)2dppz]2+ in polyol solvents and bound to DNA

Methyl substituents on the distant benzene ring of the dppz ligand in the "light switch" complex [Ru(phen)(2)dppz](2+) have profound effects on the photophysics of the complexes in water as well as in the polyol solvents ethylene glycol, glycerol, and 1,2- and 1,3-propanediol. Whereas 11,12-dimethyl substitution decreases the rate of quenching by diminishing hydrogen bonding by solvent, the 10-methyl substituent in addition also decreases both the radiative and the nonradiative rate constant for decay to the ground state of the non-hydrogen-bonded excited state species. For both the 10-methyl and the 11,12-dimethyl derivatives, the effect of methyl substitution on the equilibrium of solvent hydrogen bonding to the excited state is due to changes in the entropy terms, rather than in the enthalpy, indicating that the effect is a steric perturbation of the solvent cage around the molecule. When intercalated into DNA, the effects of methyl substitution is smaller than those in polyol solvent or water, suggesting that the water molecules that quench the excited state by hydrogen bonding to the phenazine aza nitrogens mainly access them from the same groove as in which the Ru(II) ion resides. Since the Delta-enantiomer of [Ru(phen)(2)10-methyl-dppz](2+) has an absolute quantum yield of up to 0.23 when bound to DNA, a value 7000 times higher than in pure water solution, it is promising as a new luminescent DNA probe.