Characterization of cyclodextrin-modified infrared chemical sensors: Part I. Modeling the mechanisms of interaction

To explore the properties of cyclodextrins (CDs) as an optical sensing phase, the behavior of immobilized CD in interaction with analytes was studied in this work. CDs having different cavity sizes were immobilized onto the surface of infrared (IR) internal reflection-sensing element (IRE) to kinetically monitor the behavior of CD in interaction with analytes. Several aromatic compounds having various molecular sizes and functional groups were used to characterize the interaction mechanism. A two-layer modification method was proposed in this work, which utilized a thin hydrophobic film (polyvinyl benzyl chloride) to stick on the IRE and to covalently bond to the CDs through an ethylene diamine linker. The synthesized CD phases exhibited high stability in aqueous solution. To analyze the behavior during the formation of complexes between the guest molecules and the CD phases, we modeled the interaction behavior and treated the kinetic data with the theoretical equations developed in this work. The results indicate that the behavior of the interaction between guest molecules and CDs was explained by considering the formation of two types of complexes: adsorbed complexes and inclusion complexes. The formation of the inclusion complexes was relatively fast, the time required to reach equilibrium could be shorter than a few minutes. The adsorbed complexes were also observed, but their rate of formation was relatively slow; equilibrium could be reached at times greater than 60 min. Based on the signals observed under equilibrium conditions, the concentration of inclusion complexes was approximately three times than that of the adsorbed complexes.     

Gondola-shaped tetra-rhenium metallacycles modified evanescent wave infrared chemical sensors for selective determination of volatile organic compounds

Water-stable and cavity-contained rhenium metallacycles were synthesized, and their ability to selectively interact with volatile organic compounds (VOCs) systematically studied using attenuated total reflection infrared (ATR-IR) spectroscopy. Integrating the unique properties of rhenium metallacycles into optical sensing technologies significantly improves selectivity in detecting aromatic compounds. To explore the interaction of rhenium metallacycles with VOCs, the surface of ATR sensing elements was modified with the synthesized rhenium metallacycles and used to detect VOCs. The results indicate that rhenium metallacycles have crown ether-like recognition sites, which can selectively interact with aromatic compounds, especially those bearing polar functional groups. The IR absorption bands of rhenium metallacycles shift significantly upon adsorption of aromatic VOCs, revealing a strong interaction between the tetra-rhenium metallacycles and guest aromatic compounds. Optimizing the thickness of the metallacycles coated on the surface of the sensing element led to rapid response in detection. The dynamic range of response was generally up to 30 mg/L with detection limits ca. 30 μg/L. Further studies of the effect of interferences indicate that recovery can be higher than 95% for most of the compounds tested. The results on the flow-cell device indicated that the performances were similar to a static detection system but the detection of VOCs can be largely simplified.     

Development of an aminocarboxylic acid-modified infrared chemical sensor for selective determination of tyrosine in urine

An infrared (IR) chemical sensor based on immobilization of an acidified tris(2-aminoethyl)amine (ATAA) for the detection of tyrosine in urine is described. The sensing phase (i.e., coating) was saturated with nickel ions so that it would interact with tyrosine molecules in aqueous solution through the formation of stable ATAA-Ni²⁺-tyrosine complexes. Investigation of the signals of nine amino acids shows that only the three containing phenyl groups could be detected by this sensor system. A unique spectral feature located at 1515 cm⁻¹ allowed tyrosine to be discriminated from the other two amino acids. To examine the performance of the ATAA sensing phase in the quantitative analysis of tyrosine, the effects of several factors were examined. pH affected the ability of tyrosine to form complexes; the optimal signal occurred at ca. pH 8. The concentration of ammonia buffer also affected the analytical signals through a competition effect; lower concentrations of ammonia buffer provided higher intensity signals. It was found that nickel ions are the most useful for detection of tyrosine. Although the concentration of nickel ions had less influence on the analytical signal than did the concentration of the ammonia buffer, the signal intensity was optimal when the nickel ions and the target molecule had similar concentrations. The detected time profiles indicated that the ATAA sensor phase functioned via a surface adsorption mechanism. The linear range of signal intensities was up to 600 μM with a detection limit of 30 μM.     

Comparison and joint use of near infrared spectroscopy and Fourier transform mid infrared spectroscopy for the determination of wine parameters

A study of the statistic characteristics of the multidetermination of several enological parameters - namely, alcoholic degree, volumic mass, total acidity, glycerol, total polyphenol index, lactic acid and total sulphur dioxide - depending on the spectroscopic zone employed, was carried out. The two techniques used were near infrared spectroscopy (NIRS) and Fourier transform mid infrared spectroscopy (FT-MIRS). The combination of these two regions (sum of their spectra) was also studied. NIRS yielded better results, but the use of both zones improved the determination of glycerol and total sulphur dioxide. The training and validation sets used for developing general equations were built with samples from different apellation d’origine, different wine types, etc. Partial least squares regression was used for multivariate calibration, using systematic cross validation in the calibration stage and external validation in the testing stage. Sample preparation was not required.     

Sensor applications of attenuated total reflection infrared spectroscopy

Attenuated total reflection Fourier transform infrared spectroscopy is one of the most powerful methods for recording infrared spectra of biological materials in general, and of biological membranes in particular. It is fast, yields a strong signal with only a few micrograms of sample and recent ATR devices allow the recording of nanogram quantities. Importantly, it allows information about the orientation of various parts of the molecules under study to be evaluated in an oriented system. While mid-infrared radiation has been most used for fundamental research on molecular structure, it is becoming an interesting alternative for sensor research. In addition to the usual sensor response, one of its advantages is its sensitivity to molecular conformation. In turn, the binding of a drug onto a receptor may be monitored as for other detection methods but in addition the evaluation of the structural response of the receptor to this binding is likely to bring invaluable information on the mechanism of action of the drug. The present review focuses only on the ATR-mid IR spectroscopy with a special interest for proteins and biological membranes.     

Cooled internal reflection element for infrared chemical sensing of volatile to semi-volatile organic compounds in the headspace of aqueous solutions

In this study, the cooling effect was applied to an evanescent wave type infrared (IR) chemical sensing method to effectively trap volatile organic compounds (VOCs), which have been absorbed in the hydrophobic film coated around the internal reflection element (IRE). The detection of VOCs in aqueous solutions was taken in the headspace of the aqueous solution. This method eliminates the long-term instability of hydrophobic film soaked in an aqueous solution and the potential spectral interference caused by the matrix of the aqueous solution. Thermal energy has been applied to the aqueous solution to assist in the evaporation of VOCs out of the aqueous matrix. By applying a cooling system to the IRE, the excess thermal energy can be removed leading to more stable IR signals. After examination of organic compounds with vapour pressure (P_v) ranging from 0.017 to 150 Torr, significant differences were found between IR signals from cooled and un-cooled systems. Because the thermal conductivity of the IRE used in IR detection is typically low; the efficiency in removing the thermal energy is limited. By heating the aqueous solutions to different temperatures, the IR signals showed that the sample temperature was limited to around 80 °C. The IR signal determination results for five different volatility organic compounds indicated that the optimal heating temperature was not necessary to match with the volatilities of organic compounds in cooling system. The linear regression coefficient (R²) of the standard curve for sample concentrations in the range 5-200 μg ml⁻¹ was generally higher than 0.991 and the detection limit was around a few hundred ng ml⁻¹, which was two to three times lower than that of un-cooled system.     

A New Infrared Spectroelectrochemical Cell for the Detection of Species Generated by Platinum and Screen‐Printed Carbon Electrodes

In this paper, we describe a simple and effective infrared (IR) spectroelectrochemical cell for detecting species generated from an electrochemical system featuring low‐IR‐reflectivity electrodes. The IR detection mode of attenuated total reflection (ATR) was employed to construct the spectroelectrochemical cell. Two kinds of electrodes, platinum (Pt) and screen‐printed carbon (SPC), were used to examine the performance of this new cell in detection of electroactive species generated by cyclic voltammetry. Because data generated from highly reflective electrodes are available in the literature, Pt electrode was used to characterize the performances of the developed spectroelectrochemical cell. Results indicated that species generated electrochemically can be observed readily and their responses were comparable to those described in the literature. The cell volume could be lower than 300 μL, which suggests that this approach may be very useful to obtain chemical information during electrochemistry for biological fluids with limited sample volumes. By examining the electrochemical behavior of several amino acids using both Pt and SPC electrodes, the redox behaviors can be readily observed indicating a new spectroelectrochemical cell was successfully developed for the purpose of using of SPC electrode.     

Metal Ion‐Assisted Infrared Optical Sensor for Selective Determination of Tryptophan in Urine Samples

In this study, a simple infrared chemical sensor was developed for the selective detection of tryptophan in biological fluids. This sensor was capable of trapping tryptophan molecules through the formation of relatively stable metal ion complexes on the surface of the sensing element. A proline‐modified sensing phase was immobilized on the surface of the internal reflection element. With the assistance of appropriate metal ions, tryptophan molecules were selectively attracted nearby the evanescent field such that analytical signals were generated. Factors that affected the chemical equilibria in this detection system were examined including the species and concentration of metal ion, the pH of the sample solution, and the concentration of the chelating agent. Among the examined metal ions, nickel provided the best selectivity toward the detection of tryptophan as a result of its extremely high formation constant with tryptophan. Under the optimal conditions, the detected signals were related linearly (R² > 0.99) to concentrations of tryptophan up to 600 μM. Based on three times the baseline variation of blank samples, the detection limit was ca. 5 μM. From a study of possible interfering agents—metal ions and organic species—in the sample solution, the recoveries of tryptophan were greater than 95%.     

Selective detection of the structural changes upon photoreactions of several redox cofactors in photosystem II by means of light-induced ATR-FTIR difference spectroscopy

Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy was applied for the first time to detect the structural changes upon photoreactions of redox cofactors in photosystem II (PSII). The PSII-enriched membranes from spinach were adsorbed on the surface of a silicon prism, and FTIR measurements of various redox cofactors were performed for the same sample but under different conditions by exchanging buffers in a flow cell. Light-induced FTIR difference spectra upon redox reactions of the oxygen-evolving Mn cluster, the primary quinone electron acceptor QA, the redox-active tyrosine YD, the primary electron acceptor pheophytin, and the primary electron donor chlorophyll P680 were successively recorded in buffers including different redox reagents and inhibitors. All of these cofactors remained active in the PSII membranes on the silicon surface, and the resultant spectra were basically identical to those previously recorded by the conventional transmission method. These ATR-FTIR measurements enable accurate comparison between reactions of different active sites in a single PSII sample. The present results demonstrated that the ATR-FTIR spectroscopy is a useful technique for investigation of the reaction mechanism of PSII.     

Evanescent wave infrared chemical sensor possessing a sulfonated sensing phase for the selective detection of arginine in biological fluids

This paper describes a new infrared (IR) sensing scheme for the determination of arginine (Arg). In this method, the surface of an IR evanescent wave sensing element was modified with sulfonic acid groups to selectively interact with Arg through specific interactions with its guanidine moiety. The sulfonated sensing phase was prepared using a two-layer modification approach. To demonstrate that this assembly could be used for selective infrared sensing, a large number of amino acids were subjected to analysis. Although the sulfonate groups on the surface of the sensing element did interact selectively with the guanidine groups of Arg species, lysine and histidine units caused some interference; this problem could be minimized because of the unique IR absorption bands of the guanidine moiety of Arg. To optimize the detection conditions, we studied the effects of both the pH and the composition of the polymer. The most intense signal was obtained at pH 9. We observed different adsorption rates for the detection of Arg at different values of pH, which we attribute to changes in the accessibility of the analytes to the pore structures of the sensing phase. The composition of the base polymer was also optimized; 60% PVBC (w/w) provided a water-stable, sensitive phase for the detection of Arg in aqueous solution. Under the optimized conditions, we obtained a linear range of detection up to 0.1 mM with a detection limit of ca. 5 μM.     

Preparation of ZnO Nanowires and Study of Surface‐adsorbate Interaction by Fourier‐Transform Infrared Spectroscopy

To study the surface‐adsorbate properties of ZnO nanowires, a hydrothermal method was modified to grow ZnO nanowires directly on ZnSe, which were then characterized by attenuated total reflection infrared (ATR‐IR) spectroscopy. To prepare ZnO nanowires directly on ATR sensing element of ZnSe, ZnO seed layers were first formed by annealing of ZnO seeds on ZnSe surfaces. The ZnO seed layers then were exposed to growth solution, forming ZnO nanowires directly on the ATR crystals. The interaction properties of the resulting surfaces were studied by an ATR‐IR method. The diameter, length and distribution of the ZnO nanowires can be tuned by adjusting the growth conditions, particularly the growing time and the concentrations of reagents. Two surfaces, namely Zn‐rich and Zn‐O ion‐pair surfaces were studied in detail for their adsorption properties toward compounds bearing different functional groups. By examination of several volatile organic compounds (VOCs), it was found that the Zn‐rich surface is less selective and interacts with compounds bearing the functional groups of amino and hydroxyl. The Zn‐O ion‐pair surface is more selective and a much stronger interaction was observed with non‐aromatic amino compounds. These results indicate that the improving of the selectivity of a ZnO‐based sensing device can be achieved by tuning the surface structure of the ZnO nanomaterials.     

Development of a fast analytical tool to identify oil spillages employing infrared spectral indexes and pattern recognition techniques

A fast analytical tool based on attenuated total reflectance mid-IR spectrometry is presented to evaluate the origin of spilled hydrocarbons and to monitor their fate on the environment. Ten spectral band ratios are employed in univariate and multivariate studies (principal components analysis, cluster analysis, density functions - potential curves - and Kohonen self organizing maps). Two indexes monitor typical photooxidation processes, five are related to aromatic characteristics and three study aliphatic and branched chains. The case study considered here comprises 45 samples taken on beaches (from 2002 to 2005) after the Prestige carrier accident off the Galician coast and 104 samples corresponding to weathering studies deployed for the Prestige's fuel, four typical crude oils and a fuel oil. The univariate studies yield insightful views on the gross chemical evolution whereas the multivariate studies allow for simple and straightforward elucidations on whether the unknown samples match the Prestige's fuel. Besides, a good differentiation on the weathering patterns of light and heavy products is obtained.     

Flattened infrared fiber-optic sensors for the analysis of micrograms of insoluble solid particles in solution or in a dry state

Highly sensitive absorption measurements on various samples may be carried out by Fiber-optic Evanescent Wave Spectroscopy (FEWS) in the mid-IR. Such measurements have already been done on solids, liquids and gases, using chalcogenide glass fibers or crystalline fibers. Segments of crystalline AgClBr fibers may be used as sensors of much higher sensitivity if their middle sections are pressed to form flat waveguides. We carried out measurements on micrograms of insoluble or slightly soluble particles in water, when they sedimented on the flattened parts of such sensors. Measurements were also carried out on few micrograms of dry particles that had been pressed onto the flattened parts. Flattened fiber sensors may therefore be used for measurements on micrograms of particles and they can be used for identifying the chemical nature of particles of organic, inorganic or biological materials and for studying their properties. The FEWS method, based on flattened mid-IR fiber sensors, is simple, inexpensive and does not require sample processing. It would be useful for measurements on very small quantities of particles for biomedical applications, for environmental protection, for drug enforcement agencies and for homeland security.     

Infrared spectrum and absorption coefficient of the cofactor flavin in water

Flavins play a key role as redox cofactors of enzymes involved in important metabolic processes. Moreover, they undergo photochemical reactions as chromophores in sensors of blue light or magnetic field in many organisms. The reaction mechanisms of flavoproteins have been investigated by infrared spectroscopy and theoretical studies. However, basic information on flavins in the infrared spectral range has been missing, such as absorption spectra in water and absorption coefficients. Here, the cofactors flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN) were investigated in aqueous medium by Fourier transform infrared spectroscopy. Transmission and attenuated total reflection (ATR) configuration were employed in direct comparison. Absorption spectra in the range of 920–1800 cm⁻¹ were determined after accurate subtraction of the contributions from the water vibrations. The important carbonyl vibrations were resolved at 1661 and 1712 cm⁻¹. The absorption spectra may serve as a reference for theoretical and experimental studies on the effect of the microenvironment on the flavin cofactor. Furthermore, the molar absorption coefficient of FAD at 1547 cm⁻¹ was determined to 2200 L mol⁻¹ cm⁻¹ with an integral absorption coefficient of ∼50,000 L mol⁻¹ cm⁻². These values are prerequisite for the determination of reaction yields in flavoproteins from reaction-induced difference spectra.     

Spectroscopic and Electrochemical Characterization of Iron(II) and 2,4-Dinitrotoluene

The objective of this work was the development of reliable methods to determine 2,4-dinitrotoluene, a precursor to explosives. A complex between Fe(II) ion and 2,4-dinitrotoluene was formed in solution and characterized by ultraviolet-visible absorption spectroscopy using Job’s plots and attenuated total reflection-Fourier transform infrared spectroscopy. Surface modification of glassy carbon electrodes were performed with iron nanoparticles via electrochemical reduction of iron(II). The modified electrode was employed for the determination of 2,4-dinitrotoluene. Scanning electron micrographs showed that the iron nanoparticles were incorporated on the surface of glassy carbon electrode. The electrochemical determination of 2,4-dinitrotoluene was performed by cyclic voltammetry using the modified electrode. The iron modified electrode produced larger reduction currents than the unmodified electrode for the same concentration of 2,4-dinitrotoluene. Concentrations of 2,4-dinitrotoluene as low as 10 parts per billion were determined using the modified electrode.     

Nanoscale chemical structure variations in nano-patterned and nano-porous low-k dielectrics: A comparative photothermal induced resonance and infrared spectroscopy investigation

The recent development of the photothermal induced resonance (PTIR) technique has enabled atomic force microscope based infrared (AFM-IR) spectroscopy and imaging to be achieved at the nanometer scale. However, a direct correspondance between PTIR/AFM-IR and more traditional Fourier transform IR (FTIR) spectroscopy has been prohibited for nanometer scale features due to Rayleigh diffraction constraints that limit the latter to few micron spatial resolution. In this regard, we have overcome this challenge by fabricating 1 cm² arrays of 90 nm wide fins in a nano-porous low dielectric constant (i.e. low-k) amorphous hybrid inorganic-organic silicate material using standard nano-electronic fabrication techniques. With these structures, we demonstrate both a general correspondance between AFM-IR, FTIR, and Germanium attenuated total reflection (GATR) IR spectroscopy, as well as differences in the sensitivities that these techniques exhibit to the nanoscale variations in chemical structure induced in the low-k dielectric by the nanopatterning method. To further illustrate the sensitivity of AFM-IR to changes in chemical structure with nanometer resolution, the nanopatterned low-k dielectric was exposed to additional oxidizing plasma ash cleans post patterning. Focusing on the Si-CH₃ deformation band at ∼1275 cm⁻¹, both the AFM-IR, FTIR and GATR measurements show a clear reduction in the concentration of terminal methyl groups in the low-k dielectric as the oxidation potential of the plasma ash clean increased. These results further establish the power of AFM-IR to perform nanoscale IR spectroscopy and demonstrates a stronger correspondance between AFM-IR and well-known micron scale IR techniques such as FTIR and GATR.     

Hydrolytic and photochemical aging studies of a Kevlar-PBI blend

The focus of this work is the study of the hydrolytic and photochemical aging behavior of a Kevlar^®-PBI blend fabric. Tensile tests carried out on yarns extracted from this fabric after either irradiation with UV light or exposure to high humidity indicated a continuous decrease of the breaking force with exposure time. ATR-FTIR analyses of photo-chemically aged samples showed evidence of a photo-oxidative reaction initiated by the cleavage of the amide bond of Kevlar. The overlapping of the breaking-force curves that was observed as the irradiance level was increased at constant temperature is believed to be caused by a “screen” effect produced by Photo-Fries products. The fact that at constant temperature the breaking force was unaffected by the variation of the relative humidity suggests that the absorption of water is not the rate-controlling step in the degradation kinetics. ATR-FTIR analyses revealed the presence of a new absorption band ascribed to carboxylic acid end groups produced during the hydrolysis of the amide linkage that occurred after humidity aging. The relative intensity of the -COOH band tended to a constant value as exposure times increased, suggesting that in addition to the hydrolysis, a competing recombination reaction takes place during degradation. A kinetic model for the hydrolytic degradation process was formulated and solved.     

Diffusion of transdermally delivered nitroglycerin through skin mimetics using photoacoustic and attenuated total reflectance spectrometry

Infra-red (IR) photoacoustic spectroscopy (PAS) and attenuated total reflectance spectroscopy (ATR) were used to determine the diffusion coefficient of transdermally delivered nitroglycerin (NG) within a polyethylene glycol (PEG) saturated microfibre filter. The build-up of the drug within the probed layer was measured by monitoring the change in IR bands as a function of time. The absorbance was assumed to be directly proportional to the drug concentration. The diffusion coefficient of the nitroglycerin within the filter was calculated by fitting the theoretical diffusion model to the experimental diffusion profile. The diffusion coefficient of nitroglycerin within the filter was calculated to be (3.83±0.40)×10⁻⁷ cm² s⁻¹ and (4.31±0.60)×10⁻⁷ cm² s⁻¹ using PAS and ATR, respectively. The close agreement of the two values indicates the reliability of the techniques and diffusion models.     

A comparative study of mid-infrared diffuse reflection (DR) and attenuated total reflection (ATR) spectroscopy for the detection of fungal infection on RWA2-corn

An investigation into the rapid detection of mycotoxin-producing fungi on corn by two mid-infrared spectroscopic techniques was undertaken. Corn samples from a single genotype (RWA2, blanks, and contaminated with Fusarium graminearum) were ground, sieved and, after appropriate sample preparation, subjected to mid-infrared spectroscopy using two different accessories (diffuse reflection and attenuated total reflection). The measured spectra were evaluated with principal component analysis (PCA) and the blank and contaminated samples were classified by cluster analysis. Reference data for fungal metabolites were obtained with conventional methods. After extraction and clean-up, each sample was analyzed for the toxin deoxynivalenol (DON) by gas chromatography with electron capture detection (GC-ECD) and ergosterol (a parameter for the total fungal biomass) by high-performance liquid chromatography with diode array detection (HPLC-DAD). The concentration ranges for contaminated samples were 880–3600 g/kg for ergosterol and 300–2600 g/kg for DON. Classification efficiency was 100% for ATR spectra. DR spectra did not show as obvious a clustering of contaminated and blank samples. Results and trends were also observed in single spectra plots. Quantification using a PLS1 regression algorithm showed good correlation with DON reference data, but a rather high standard error of prediction (SEP) with 600 g/kg (DR) and 490 g/kg (ATR), respectively, for ergosterol. Comparing measurement procedures and results showed advantages for the ATR technique, mainly owing to its ease of use and the easier interpretation of results that were better with respect to classification and quantification.     

Acid Denaturation and Refolding of Cytochrome c on Silica Surface

Denaturation of oxidized cytochrome c (cyt c) adsorbed to a hydrophilic fused silica surface was studied by UV‐VIS attenuated total reflection (ATR) spectroscopy using a multiple optical pass system newly developed by this lab. Cyt c surface adsorption at neutral pH gave an adsorption equilibrium constant of K_a = 2 × 10⁵ M^?1 and a surface coverage at 63% of a monolayer saturation. Protein unfolding by acid denaturation was studied by equilibrating surface bound cyt c with acid buffers ranging in pH from 5 to 2. Protein orientation and surface coverage were calculated based on a theoretical model developed in previous work. The average heme tilt angle (44°) was found to be independent of pH, implicating protein‐surface interactions as the dominant factor governing adsorption. A non‐random molecular orientation distribution of cyt c on the surface was observed, providing further support for the dominance of protein‐surface interactions. It was shown that when denaturing acid buffers were removed and replaced with a neutral buffer cyt c refolded, assuming their original conformation. The combination of unique, yet applicable, science and laboratory skills involved in this project had a tremendous impact on the authors‘ undergraduate curriculum, making it ideal for capstone project development.