钌(II)多吡啶配合物光断裂DNA的实验研究

研究了一系列钌(II)多吡啶配合物对pBR 322 DNA 的光断裂作用, 并与光谱法和粘度法的研究结果进行了对比. 实验结果表明, 钌(II)多吡啶配合物光断裂DNA的能力不仅与配合物与DNA相互作用的结合模式和结合强度有关, 还与配合物自身的电子结构有关; 钌(II)多吡啶配合物对DNA的光断裂存在立体选择性; 其断裂机理是激发态的配合物与溶液中的氧分子发生能量转移生成单线态氧活性氧化物种, 将鸟嘌呤碱基氧化而导致DNA断裂. 本研究对于遗传工程中的化学核酸酶以及以DNA为靶标的药物设计有重要的意义.     

DNA structure, binding mechanism and biology functions of polypyridyl complexes in biomedicine

There is considerable research interest and vigorous debate about the DNA binding of polypyridyl complexes including the electron transfer involving DNA. In this review, based on the fluorescence quenching experiments, it was proposed that DNA might serve as a conductor. From the time-interval CD spectra, the different binding rates of A- and A-enantiomer to calf thymus DNA were observed. The factors influencing the DNA-binding of polypyridyl complexes, and the potential bio-functions of the complexes are also discussed.     

Cellular Uptake of a Polypyridyl Ruthenium Complex Revealed Using a Fluorescent Rhodamine‐modified Ruthenium Complex

A fluorescent polypyridyl ruthenium complex was successfully prepared using an amide bond linkage to link two rhodamine moieties through bipyridine groups. Although photo‐induced electron transfer (PET) quenched the fluorescent intensity, the quantum yield of the rhodamine‐modified Ru(II) complex was 0.17 in water, sufficient for observing the fluorophore behaviour in biological systems. The rhodaminemodified Ru(II) complex was found to inhibit the bacterial growth of E. coli. In vitro fluorescence images of human hepatoma cells (SK‐Hep1) showed that a fluorescent polypyridyl ruthenium complex not only supported the above observation but also preferably accumulated in the cytoplasmic region inside the cell. These observations suggest that in addition to strong Ru–DNA interactions, Ru‐protein interactions in the cytoplasmic regions are strong and are therefore important to the development of metallopharmaceuticals.     

基于钌多吡啶类配合物的DNA分子光开关及生物传感研究

DNA结构具有多态性,利用小分子化合物对不同结构的DNA分子进行识别及调控具有重要的生物学意义.本文主要针对近年来钌多吡啶配合物作为DNA分子光开关的研究进行综述,内容包括DNA分子光开关的机制,不同结构DNA的分子光开关,DNA分子光开关的开关循环控制策略和钌多吡啶类配合物及与纳米材料相结合作为生物传感器的研究.     

Synthesis and spectroscopic DNA binding studies of [Ru(phen)2(tbtc)]2+ and [Ru(2,9-dmp)2(tbtc)]2+

A new polypyridyl ligand tbtc (tbtc=4,5,9,14-tetraaza-benzo[b]triphenylene-11-carboxylic acid methyl ester) and its complexes [Ru(phen)2(tbtc)]2+ (1) (phen=1,10-phenanthroline) and [Ru(2,9-dmp)2(tbtc)]2+ (2) (2,9-dmp=2,9-dimethyl-1,10-phenanthroline) were synthesized and characterized by element analysis, MS, and 1H NMR. The DNA binding properties of both complexes to calf thymus DNA (CT-DNA) were investigated by different spectrophotometric methods and viscosity measurements. The results suggest that both complexes bind to DNA via an intercalative mode, and the DNA binding affinity of complex 1 is much greater than that of complex 2. This difference in binding affinity probably was caused by the different ancillary ligands. Also, when irradiated at 365 nm, complex 1 was found to be a more-effective DNA-cleaving agent than complex 2.     

新型钌(Ⅱ)多吡啶配合物与DNA作用的黏度法研究

用黏度法系统地研究了新型钌(Ⅱ)多吡啶配合物与DNA的相互作用.结果显示:在一定程度上增大配体的刚性平面,将增大钌(Ⅱ)多吡啶配合物插入DNA碱基对的能力,但当配体的刚性平面太大时,却又由于位阻作用而阻碍了配体对DNA的插入;能够使配体平面性增强的分子内氢键的形成,有利于配合物对DNA的插入作用;配体中引入较大体积的取代基而引起的配体芳环间的扭转,将导致钌(Ⅱ)多吡啶配合物只能“部分地”或“非经典地”插入DNA.     

Studies on the Interaction of Ru(Ⅱ) Polypyridyl Mixed-ligand Complexes and DNA by Viscosity Measurement

The interaction of transition metal polypyridyl coordination compounds with DNA has been extensively studied in the past few years^[1]. Li the case of double stranded DNA, some coordination compounds may bind in the major groove with one ligand inserting between two base pairs DNA. The viscosity studies provide a strong argument for intercalation^[2].     

DNA binding ad photocleavage properties of cationic porphyrin-polypyridyl ruthenium(II) hybrids

Three cationic porphyrin-polypyridyl ruthenium(II) hybrids, differing in the planar areas of the polypyridyl moieties, were synthesized and their interactions with DNA investigated using absorption and fluorescence titration, induced circular dichroism spectra, thermal DNA denaturation measurements, as well as surface-enhanced Raman spectroscopy. Ethidium bromide competition experiments determined the binding affinity constants (K_b) of these compounds for CT DNA. DNA photocleavage experiments indicated that these hybrids have a broader cleaving wavelength range than traditional drugs and ¹O₂ is the reactive species responsible for the cleavage. The proper planar area was proved to be responsible for the larger K_b and higher DNA photocleavage efficiency.     

多吡啶钌配合物作为DNA结构探针的研究

本文对多吡啶钌配合物作为DNA荧光或结构探针的研究背景、研究技术及其特点、钌配合物与DNA的键合模式及其结合力大小的影响因素、钌配合物与DNA键合的异构选择性及不同键合速率、非放射性核酸标记及DNA分子光开关等方面进行了简要述评     

Theoretical insights and design of Ru(II)-based complexes with DNA-photocleavage properties

A theoretical research on the properties of Ru(II)-based complexes 1–5 with polypyridyl ligands damaging DNA with the help of light has been carried out. Firstly, the redox potential, electrons-transfer (ET) activation energy, and intra-molecular reorganization energy were computed using DFT (density functional theory), and the results can be used to explain the DNA-photocleavage efficiencies of complexes. Secondly, the effect of ligands on the reduction potentials of complexes in the excited state was elucidated, and the reason of complexes cleaving DNA by the oxidation-reduction reaction and the produced singlet oxygen was explained. Finally, the frontier orbitals of complexes were computed, which was used to qualitatively explain the reason of complexes with high reduction potentials in the excited state.     

Interaction between the DNA model base 9-ethylguanine and a group of ruthenium polypyridyl complexes: kinetics and conformational temperature dependence

The binding capability of three ruthenium polypyridyl compounds of structural formula [Ru(apy)(tpy)Ln-](ClO4)(2-n) [1a-c; apy = 2,2'-azobis(pyridine), tpy = 2,2':6',2'-terpyridine, L = Cl, H2O, CH3CN] to a fragment of DNA was studied. The interaction between each of these complexes and the DNA model base 9-ethylguanine (9-EtGua) was followed by means of 1H NMR studies. Density functional theory calculations were carried out to explore the preferential ways of coordination between the ruthenium complexes and guanine. The ruthenium-9-EtGua adduct formed was isolated and fully characterized using different techniques. A variable-temperature 1H NMR experiment was carried out that showed that while the 9-EtGua fragment was rotating fast at high temperature, a loss of symmetry was suffered by the model base adduct as the temperature was lowered, indicating restricted rotation of the guanine residue.     

A STUDY OF SOME POLYPYRIDYLRUTHENIUM(II) COMPLEXES AS DNA BINDERS AND PHOTOCLEAVAGE REAGENTS

The nature of the binding of several ruthenium polypyridyl complexes containing 2,2'-bipyridine (bipy), 4,4'-dimethyl-2,2'-bipyridine (DMB), 1,10-phenanthroline (phen), 4,7-diphenyl-1,10-phenanthroline (DPP), 2,2',2"-terpyridine (terpy), 2,2'-biquinoline (biq), 1,4,5,8-tetraazaphenanthrene (TAP) and 1,4,5,8,9,12-hexaazatriphenylene (HAT), with calf thymus DNA, poly[d(A-T)] and poly[d(G-C)] were studied by absorption and emission spectroscopy, DNA melting techniques, and emission lifetime measurements. In low ionic strength phosphate buffer, spectroscopic changes and DNA stabilization depended on the polypyridyl ligands present, and indicated binding that varied from substantially electrostatic to intercalative. Ru(bipy)2(HAT)2+ and Ru(phen)3(2+), which bind by partial intercalation, also show a strong preference for poly[d(A-T)]. The emission quantum yields for most complexes were increased in the presence of DNA. An exception was Ru(TAP)3(2+) which has a markedly reduced emission quantum yield and lifetime in the presence of poly[d(G-C)] or CT-DNA, due to photoredox interaction with quanines. Emission decays of the complexes generally showed multiexponential behaviour. The ability of the ruthenium complexes to sensitise DNA cleavage was determined using pBR322 plasmid DNA. Ru(TAP)3(2+) is the most efficient sensitiser while uncharged complexes and complexes with very short-lived excited states do not cleave DNA.     

Topoisomerase I inhibitory and photocleavage activity of non‐dppz DNA ‘light switches’ based on ruthenium complexes containing nitro group

A new polypyridyl ligand containing a nitro group and two new ruthenium complexes of it were synthesized. The two complexes exhibited non‐dppz DNA ‘light switch’ effects after interaction with calf thymus DNA. Introducing both electron‐withdrawing group (─ NO₂) and electron‐donating group (─ CH₃) may be the reason that the two complexes display DNA ‘light switch’ behaviors. Furthermore, one of the complexes showed higher photocleavage activity, topoisomerase I inhibition activity and DNA affinity than the other. The present work shows that the more active complex can be employed as a non‐dppz DNA ‘light switch’, DNA photocleaver and topoisomerase I inhibitor. In addition, the two complexes have no or weak cytotoxic activities against Eca‐109 and A549 cells.     

Separation of stereoisomers of dinuclear metal complexes by binding affinity chromatography using non-duplex DNA

Affinity chromatography--using non-duplex DNA as the affinity ligand--has been used as a highly efficient means of separating stereoisomers of dinuclear polypyridyl ruthenium(II) complexes.     

Studies of interactions among cobalt(III) polypyridyl complexes, 6-mercaptopurine and DNA

The interactions between cobalt polypyridyl coordination compounds Co(L)(3)(3+)(L=1,10-phenanthroline(phen), and bipyridine(bpy)),6-mercaptopurine and calf thymus DNA have been investigated using electrochemical methods(cyclic voltammetry, differential pulse voltammetry), electronic absorption spectroscopy and viscosity measurements. Results indicate that there is an obvious interaction equilibrium between Co(L)(3)(3+), 6-mercaptopurine and DNA. The phenomena are investigated for the first time, and believed to be helpful to use the anticancer drugs more efficiently.     

钌多吡啶配合物与DNA相互作用研究新进展

DNA是携带遗传信息和基因表达的基本物质.因为复杂的生物环境以及外源因素的影响,DNA存在灵活多变的结构,而不同的构型都有其独特的意义和重要的生物学功能,相关研究受到越来越广泛的关注.本文主要针对近年来钌多吡啶化合物与DNA相互作用研究的最新进展做一综述,包括DNA结构的识别,DNA二级、三级结构的调控,DNA光交联以及作为非病毒基因载体,细胞成像以及抗肿瘤等方面的应用.     

钌(II)多吡啶配合物与DNA相互作用研究*

DNA是遗传信息的携带者和基因表达的物质基础,金属配合物与DNA的相互作用研究已受到广泛关注,成为生物无机化学的重要研究内容之一。本文简要评述了钌(II)多吡啶配合物在DNA识别、断裂及拓扑异构酶抑制方面的研究情况。     

三齿多吡啶钴(Ⅲ)、钌(Ⅱ)配合物的合成、表征及与DNA的相互作用

合成了两种新型三齿多吡啶钴(Ⅲ) [Co(PhTPY)(H2Bzimpy)]3+(A)和钌(Ⅱ) [Ru(PhTPY)(Bzimpy)](B)混配配合物, 用元素分析和1H NMR等对其结构进行了表征, 测定了配合物B的晶体结构. 用电子吸收光谱和荧光光谱等方法研究了配合物与小牛胸腺DNA的相互作用以及配合物对pBR322DNA的断裂作用. 结果表明, 两种配合物均是通过静电作用与DNA结合的. 凝胶电泳实验结果表明, 配合物A经波长310 nm光辐射15 min, 配合物B经450 nm光辐射4 min, 可使超螺旋pBR322DNA断裂为开环缺口型和线型DNA.     

Luminescent Ruthenium(II) Polypyridyl Complexes as Nonviral Carriers for DNA Delivery

Two new luminescent ruthenium(II) polypyridyl complexes, [Ru(bpy)₂(tpt‐phen)]Cl₂ ( 1 ; bpy=2,2′‐bipyridine, tpt‐phen=triptycenyl‐1,10‐phenanthroline) and [Ru(phen)₂(tpt‐phen)]Cl₂ ( 2 ; phen=1,10‐phenanthroline), have been developed as potential nonviral vectors for DNA delivery. Photophysical and electrochemical properties of the complexes have been investigated and corroborated with electronic structure calculations. DNA condensation by these complexes has been investigated by UV/Vis and emission spectroscopy, circular dichroism spectroscopy, atomic force microscopy, dynamic light scattering, confocal microscopy, and electrophoretic mobility studies. These complexes interact with DNA and efficiently condense DNA into globular nanoparticles that are taken up efficiently by HeLa cells. DNA cleavage inability and biocompatibility of complexes have been explored. Both complexes have good gene transfection abilities.