Proton,phosphorus and carbon nuclear magnetic relaxation studies on the interaction of poly(riboadenylic acid) with Cu2+

Interaction between poly(riboadenylic acid) (poly(A)) and Cu²⁺ in neutral aqueous (D₂O) solution has been studied by ¹H, ³¹P, and ¹³C nuclear magnetic resonance. electron-nuclear hyperfine coupling constant and apparent electron-nuclear distances were determined by measurement of T₁ and T₂ values as a function of temperature. The apparent distance from Cu²⁺ to H(2), H(8), H(1′), and phosphorus nuclei were estimated to be 4.1, 3.7, 5.1, and 3.1 Å from these results. Cu²⁺ was found to coordinate directly to the phosphate groups of poly(A) (Type I complex). Simultaneously there are bindings of Cu²⁺ directly to one of the nitrogen atoms of adenine ring, mainly to N(7) (Type II complex) and either N(1) or N(3) (Type III complex).     

Quantitative F NMR method validation and application to the quantitative analysis of a fluoro-polyphosphates mixture

Quantitative ¹⁹F NMR (QNMR) was developed and employed to determine the amounts of four kinds of fluoropolyphosphates (FPPs) in a mixture containing sodium monofluoro-phosphate (MFP), sodium monofluoro-dipolyphosphate (MFDPP), sodium monofluoro-tripolyphosphate (MFTPP) and sodium difluoro-tripolyphosphate (DFTPP). The amounts of these ingredients cannot be measured by high-performance liquid chromatography (HPLC) because no high-purity standard samples are available. The main parameter “delay time (d1) between two scans” of affecting the response of NMR signal was determined by measuring longitudinal relaxation time (T1) to be 25 s. By using NaF as an internal reference to measure the amount of MFP solution with known concentration and then to compare the deviation between experiment value and real value, a simple and effective approach for checking out the validity of ¹⁹F QNMR method was carried out. Six experiments with different mole ratios of NaF/MFP over 200 times were repeated and the relative standard deviation (R.S.D.) of results is less than 2.0%, the limit of detection of ¹⁹F QNMR can reach to 1.0 mmol/L. NaF was used as an internal reference for the quantitative analysis of FPPs mixture. The amount of each FPP in FPPs mixture obtained by ¹⁹F QNMR was calculated and the R.S.D.s of results were less than 4.81%.     

Flow reactor studies of methyl radical oxidation reactions in methane‐perturbed moist carbon monoxide oxidation at high pressure with model sensitivity analysis

New rate constant determinations for the reactions CH₃ + HO₂ → CH₃O + OH (1) CH₃ + HO₂ → CH₄ + O₂ (2) CH₃ + O₂ → CH₂O + OH (3) were made at 1000 K by fitting species profiles from high‐pressure flow reactor experiments on moist CO oxidation perturbed with methane. These reactions are important steps in the intermediate‐temperature burnout of hydrocarbon pollutants, especially at super‐atmospheric pressure. The experiments used in the fit were selected to minimize the uncertainty in the determinations. These uncertainties were estimated using model sensitivity coefficients, derived for time‐shifted flow reactor experiments, along with literature uncertainties for the unfitted rate constants. The experimental optimization procedure significantly reduced the uncertainties in each of these rate constants over the current literature values. The new rate constants and their uncertainties were determined to be, at 1000 K: k₁ = 1.48(10)¹³ cm³ mol⁻¹ s⁻¹ (UF = 2.24) k₂ = 3.16(10)¹² cm³ mol⁻¹ s⁻¹ (UF = 2.89) k₃ = 2.36(10)⁸ cm³ mol⁻¹ s⁻¹ (UF = 4.23) There are no direct and few indirect measurements of reactions ( 1 ) and ( 2 ) in the literature. There are few measurements of reaction ( 3 ) near 1000 K. These results therefore represent an important refinement to radical oxidation chemistry of significance to methane and higher alkane oxidation. The model sensitivity analysis used in the experimental design was also used to characterize the mechanistic dependence of the new rate constant values. Linear sensitivities of the fitted rate constants to the unfitted rate constants were given. The sensitivity analysis was used to show that the determinations above are primarily dependent on the rate constants chosen for the reactions CH₃ + CH₃ + M → C₂H₆ + M and CH₂O + HO₂ → HCO + H₂O₂. Uncertainties in the rate constants of these two reactions are the primary contributors to the uncertainty factors given above. Further reductions in the uncertainties of these kinetics would lead to significant reductions in the uncertainties in our determinations of k₁, k₂, and k₃. © 2001 John Wiley & Sons, Inc. Int J Chem Kinet 33: 75–100, 2001     

Synthesis and Characterization of trans‐PdII Trimethylsilylchalcogenolates

The trans‐bis(trimethylsilyl)chalcogenolate palladium complexes, trans‐[Pd(ESiMe₃)₂(PnBu₃)₂] [E = S ( 1 ) and Se ( 2 )] were synthesized in good yields and high purity by reacting trans‐[PdCl₂(PBu₃)₂] with LiESiMe₃ (E = S, Se), respectively. These complexes were characterized by ¹H, ¹³C{¹H}, ³¹P{¹H} (and ⁷⁷Se{¹H}) NMR spectroscopy and single‐crystal X‐ray analysis. The reaction of 2 with propionyl chloride led to the formation of trans‐[Pd(SeC(O)CH₂CH₃)₂(PnBu₃)₂] ( 3 ), a trans‐bis(selenocarboxylato) palladium complex and thus established a new method for the formation of this type of complex. Complex 3 was characterized by ¹H, ¹³C{¹H}, ³¹P{¹H} and ⁷⁷Se{¹H} NMR spectroscopy and a single‐crystal X‐ray structure analysis.     

Chiral,non-racemic α-hydroxyphosphonates and phosphonic acids via stereoselective hydroxylation of diallyl benzylphosphonates

Chiral, non-racemic α-hydroxyphosphonates have been prepared in high enantiomeric excess (96–98% ee), via stereoselective oxaziridine-mediated hydroxylation of diallyl benzylphosphonates. The enantiomeric purity and absolute configuration of the α-hydroxyphosphonates was established from ¹H and ³¹P NMR spectroscopy of the (S)-O-methylmandelate esters. Deprotection of the diallyl α-hydroxyphosphonates under neutral conditions furnished the corresponding free phosphonic acids, retaining a high degree of stereochemical purity (90 to >98% ee).     

Multiple magnetic resonance studies of some para-substituted derivatives of triphenyl phosphine

¹⁹F and ³¹P decoupling experiments are used to simplify the proton spectra of para-substituted derivatives of triphenyl phosphine, prior to ¹H-{¹H} tickling experiments. ³J(³¹P…?H) and ⁴J(³¹P…?H) are positive, and ⁵J(³¹P…?¹⁹F) is negative in the trivalent phosphorus derivatives, and all become more positive as the valency of the phosphorus atom is increased. A triple resonance experiment is used to show that ⁷J(³¹P…?H) in [p-CH₃C₆H₄CH₂P^⊕(C₆H₅)₃] is negative. The double resonance technique is used to relate the ³¹P chemical shifts to the tetramethylsilane resonant frequency.     

Interfacial synthesis of bisphenol A tetrachlorocyclotriphosphazene from bisphenol A and hexachlorocyclotriphosphazene

The effect of solvent purity on the synthesis and yield of bisphenol A tetrachlorocyclotriphosphazene (BATCCP) has not been described in the literature. The purpose of this research was to synthesize BATCCP hybrid monomers and to evaluate the effect of solvent purity on the BATCCP production. BATCCP monomers were prepared by an interfacial procedure in a water/toluene system as a function of time with the assistance of a phase transfer catalyst, tetraoctylammonium bromide. ¹H and ³¹P NMR confirmed the production of BATCCP monomer by the appearance of chemical shifts at 7.18 and 5.35 ppm in the ¹H NMR and 23.4 and 13.9 ppm in the ³¹P NMR, respectively. Distillation of the toluene, not suggested in previous reports of HCCP hybrid synthesis, resulted in an improvement of actual % yield to 40% and stability of the product throughout the 1440 min reaction as confirmed by MALDI, compared with an 11% actual yield at 15 min, decaying to 2% over a 1440 min reaction when the synthesis was performed with ‘anhydrous toluene’ as provided commercially without further distillation.     

Elucidation of spermidine interaction with nucleotide ATP by multiple NMR techniques

Interaction of polyamines with nucleotides plays a key role in many biological processes. Here we use multiple NMR techniques to characterize interaction of spermidine with adenosine 5′‐triphosphate (ATP). Two‐dimensional ¹H‐¹⁵N spectra obtained from gs‐HMBC experiments at varied pH show significant shift of N‐1 peak around pH 2.0–7.0 range, suggesting that spermidine binds to N‐1 site of ATP base. The binding facilitates N‐1 deprotonation, shifting its pK_a from 4.3 to 3.4. By correlating ¹⁵N and ³¹P chemical shift data, it is clear that spermidine is capable of concurrently binding to ATP base and phosphate sites around pH 4.0–7.0. The self‐diffusion constants derived from ¹H PFG‐diffusion measurements provide evidence that binding of spermidine to ATP is in 1:1 ratio, and pH variations do not induce significant nucleotide self‐association in our samples. ³¹P spectral analysis suggests that at neutral pH, Mg²⁺ ion competes with spermidine and shows stronger binding to ATP phosphates. From ³¹P kinetic measurements of myosin‐catalyzed ATP hydrolysis, it is found that binding of spermidine affects the stability and reactivity of ATP. These NMR results are important for advancing the studies on nucleotide–polyamine interaction and its impact on nucleotide structures and activities under varied conditions. Copyright © 2009 John Wiley & Sons, Ltd.     

Synthesis,Spectroscopic Studies,and Antifungal Activity of Tris(O-Alkyl or O-Aryltrithiophosphato) Aluminum(III)

Abstract

Aluminum(III) derivatives of O-alkyl or O-aryl trithiophosphate of the type Al[S₂P(SH)OR]₃ (R = Me, Et, Prⁱ, Buⁱ, Ph, CH₂Ph) have been synthesized. The products were obtained as white powdery solids. The monomers are soluble in common organic solvents and were characterized by elemental analyses, molecular weight determinations, and IR and (¹H, ²⁷Al, and ³¹P) NMR spectroscopic studies, which are consistent with six coordinated aluminum and bidentate behavior of the trithiophosphate moiety. The products also exhibit antifungal effectiveness against powdery mildew disease.     

Long-range nuclear spin–spin coupling between selenium-77 and phosphorus-31 in biphosphorus compounds

The coupling constants ⁿJ(⁷⁷Se³¹P), n = 1–4, have been measured in the proton-decoupled ³¹P NMR spectra of a range of diphosphorus selenides and diselenides. ³¹P–{¹H, ³¹P} and ³¹P–{¹H, ⁷⁷Se} triple resonance experiments have been used to establish the signs of the coupling constants, and it is found that both the magnitudes and signs depend upon the stereochemical relationship of the coupled nuclei.     

1‐Phosphabicyclo[2.2.1]heptane

1‐Phosphabicyclo[2.2.1]heptanes Exo‐endo‐ and exo‐exo‐2.6‐dimethyl‐1‐phosphabicyclo [2.2.1]heptane have been obtained by cyclization of 2‐methyl‐4‐(2‐propenyl)phospholane in the presence of the complex base, sodium salt of diethylenglycolmonoethylether ‐ sodium amide in THF (NAMEDEG). The bicyclic phosphanes are characterized by reac‐tions with selenium, sulfur, (CH₃)₂SeO, CH₃I and HSO₃F, respectively, elemental analysis, X‐ray crystal structure analysis as well as ¹H, ¹³C, ³¹P NMR spectral measurements. The steric demand of these phosphanes as complex ligands has been estimated from the P, H coupling constants of the phosphonium fluorosulphates according to the Tolman model. The phosphane selenides were found to display the lowest values for the ¹J(Se, P) coupling constant, found up to now for alicyclic and cyclic aliphatic tertiary phosphane selenides. The ⁿJ(P, H)‐ and ⁿJ(H, H)_{n=2, 3} coupling constants have been extracted from the proton spectra at 600 MHz by computerized analysis.     

Behavioural dynamics in the biological control of pests: role of silicon complexes

The complexes of silicon (IV) with Schiff base ligands (L₁H and L₂H of isatin derivatives) having a sulfur and oxygen donor system were prepared by the reactions in methanol environment. These were isolated and characterized by elemental analysis, molecular weight determinations and conductance measurements. On the basis of electronic, infrared, ¹H, ¹³C and ²⁹Si NMR spectral studies, trigonal bipyramidal geometry was suggested for the resulting complexes. These data support preferential binding of sulfur and oxygen atom to the silicon atom. The disease resistance activities of the ligands and their corresponding complexes were examined successfully in in vitro and in vivo experiments, against pathogenic fungi and bacteria. Results were quite encouraging and these were compared with the standard pesticides Bavistin and Streptomycin. Copyright © 2008 John Wiley & Sons, Ltd.     

Molybdenum(0) and Tungsten(0) Complexes with P,S and P,Se Monooxidized Bis(phosphanyl)amine Ligands

Reactions of monooxidized thioyl and selenoyl bis(phosphanyl)amine ligands C₁₀H₇‐1‐N(P(E)Ph₂)(PPh₂) [E = S ( 1 ), Se ( 2 )] with Mo(CO)₄(pip)₂ and W(CO)₄(cod) afforded the complexes [M(CO)₄{ 1 ‐κ²P,S}] [M = Mo ( 3 ), W ( 4 )] and [M(CO)₄{ 2 ‐κ²P,Se}] [M = Mo ( 5 ), W ( 6 )]. Complexes 3 – 6 were characterized by multinuclear NMR (¹H, ¹³C, ³¹P, and ⁷⁷Se NMR) and IR spectroscopy. Crystal‐structure determinations were carried out on 3 , 5 , and 6 , which represent the first examples of structurally characterized complexes of such ligands with group‐6 metal carbonyls.     

Preparative isolation and purification of anti‐tumor agent ansamitocin P‐3 from fermentation broth of Actinosynnema pretiosum using high‐performance counter‐current chromatography

Ansamitocin P‐3 is a potent anti‐tumor maytansinoid found in Actinosynnema pretiosum. However, due to the complexity of the fermentation broth of Actinomycete, how to effectively separate ansamitocin P‐3 is still a challenge. In this study, both analytical and preparative high‐performance counter‐current chromatography were successfully used to separate and purify ansamitocin P‐3 from fermentation broth. A total of 28.8 mg ansamitocin P‐3 with purity of 98.4% was separated from 160 mg crude sample of fermentation broth in less than 80 min with the two‐phase solvent system of hexane–ethyl acetate–methanol–water (0.6:1:0.6:1, v/v/v/v). The purity and structural identification were determined by HPLC, ¹H NMR, ¹³C NMR and mass spectroscopy.     

Synthesis,spectroscopic and configurational study,and ab initio calculations of new diazaphospholanes

New 2-substituted diazaphospholane-2-oxides (I-III, V-VIII) and diazaphosphorinane-2-oxide (IV) were synthesised and characterised by ¹H, ¹³C, and ³¹P NMR, IR spectroscopy, and elemental analysis. The presence of chiral diamino groups in compounds II and V–VIII gives rise to various diastereomers so that the ³¹P{¹H} NMR spectra demonstrated three and two peaks with different ratios, respectively. Also, the ¹H and ¹³C{¹H} NMR spectra of compounds II and V–VIII revealed three and two sets of signals for the related conformers (diastereomers). Interestingly, the ³¹P NMR spectrum of V in D₂O indicated a great upfield shift (Δδ = 19.0) for ³¹P relative to the value obtained in DMSO-d₆ (solvent effect). The two signals in V split further to three signals in the presence of β-cyclodextrin. Moreover, conformational analysis of diazaphospholane V was studied by ab initio calculations at the HF and B3LYP levels of theory using the Gaussian 98 program. Results indicated that among four suggested diastereomers (C1–C4) of V, C1 and C3 containing methyl group in the equatorial position are the most stable forms.     

The 1H, 13C and 31P NMR spectra of EZ pairs of some phosphorus substituted alkenes

The olefins Ph₂P(X)CH?CHR [X=lone pair, O, S, Ch₃I; R?Ch₃, ph, P(X)ph₂] have been prepared and their ¹H, ¹³C and ³¹P NMR spectra measured. trans ³J[P(IV)C] (range 18.3–25.7 Hz) is greater than cis ³J[P(IV)C] (range 6.9–11 Hz) but this relationship does not hold for P(III) compounds. In the ³¹P spectra the E isomer absorbs to higher field than the Z isomer for P(III) and P(IV) compounds. The ¹H data are in accord with previous results; average substituent shielding coefficients for ph₂P(X) substituted alkenes are reported.     

187Os subspectra in 1H and 31P{1H} spectra of triosmium carbonyl clusters

A survey of the use of ¹⁸⁷Os satellite subspectra in ¹H and ³¹P{¹H} spectra of triosmium carbonyl clusters is reported. By varying evolution delays in HMQC spectra of [Os₃(µ‐H)₂(CO)₁₀] we have selectively extracted the values for ¹J(Os,H) and ²J(Os,H), respectively. An analysis of the principal modes of phosphine coordination in triosmium clusters demonstrates that ³¹P{¹H}¹⁸⁷Os satellite subspectra are diagnostic for equatorial coordination [¹J(Os,P) = 211–223 Hz] or for axial coordination (perpendicular to the plane of the cluster) [¹J(Os,P) ≈ 147 Hz]. Chelating and bridging diphosphines yield ¹⁸⁷Os satellite subspectra which are the sum of A₂X and AA′X spin systems. If significant P–P coupling is present, the AA′X component requires simulation. All observed ²J(Os,P) trans‐equatorial couplings fall in the range 38–65 Hz. Copyright © 2001 John Wiley & Sons, Ltd.     

A high-resolution phosphorus-31 nuclear magnetic resonance (NMR) spectroscopic method for the non-phosphorus markers of chemical warfare agents

A high-resolution phosphorus-31 nuclear magnetic resonance (NMR) spectroscopic method has been developed for detection, identification and quantification of non-phosphorus markers of toxic nerve agents (soman and V-class), vesicants (HD, HN-2, HN-3), and incapacitating agent (Bz). These analytes were converted to phosphorus-containing derivatives via phosphitylation reaction of their hydroxyl and sulfhydryl functions (using 2-chloro-4,4,5,5-tetramethyl-1,3,2-dioxaphospholane). This was followed by ³¹P{¹H} and ³¹P NMR analysis of these derivatives. The chemical shifts (δ) and coupling constants (³ J _P–H) of derivatives were used for their specific detection and identification. The method allowed clear distinction between the alcohols and thiols. The lower limits of detection of these analytes were found to be between 12 and 28 μg obtained from 128 transients of ³¹P{¹H} quantitative NMR experiments. Utility of the method was ensured by the detection and identification of triethanolamine present (at an original concentration of 5 μg/mL) in an aqueous sample from 28th OPCW Official Proficiency Tests.     

Measurements of saturated-liquid densities for isobutane at T = (280 to 407) K

Ten measurements of the saturated-liquid density for isobutane were obtained by means of a metal-bellows variable volumometer at T = (280 to 407) K. The mole fraction purity of the isobutane used in the measurements was 0.9999. For the determination of the saturation boundary at each temperature for isobutane, we measured the density data at intervals of about 12 kPa very close to the saturation boundary. The expanded uncertainties (k = 2) in temperature, pressure, and density measurements have been estimated to be less than 3 mK, less than 0.8 kPa, and 0.08%, respectively. After such measurements had been completed, the saturated-liquid density results for each temperature were determined as the point of intersect between the isotherm and our previously determined vapour pressure value. The expanded uncertainties (k = 2) in the present saturated-liquid density data have also been estimated to be less than 0.08%, except the uncertainty of the saturated-liquid density data at T = 400 K being 0.09% (0.31 kg · m⁻³). Based on the present measurements as input data, the saturated-liquid density correlation were also provided for the systematic comparisons between the present measurements and the literature data.     

Elucidating the Nature of the External Acid Sites of ZSM-5 Zeolites Using NMR Probe Molecules

The identification of acid and nonacid species at the external surface of zeolites remains a major challenge, in contrast to the extensively-studied internal acid sites. Here, it is shown that the synthesis of zeolite ZSM-5 samples with distinct particle sizes, combined with solid-state NMR and computational studies of trimethylphosphine oxide (TMPO) adsorption, provides insight into the chemical species on the external surface of the zeolite crystals. ¹H–³¹P HETCOR NMR spectra of TMPO-loaded zeolites exhibit a broad correlation peak at δ_P ∼35–55 ppm and δ_H ∼5–12 ppm assigned to external SiOH species. Pore-mouth Brønsted acid sites exhibit ³¹P and ¹H NMR resonances and adsorption energies close to those reported for internal acid sites interacting with TMPO. The presence of an external tricoordinate Al-Lewis site interacting strongly with TMPO is suggested, resulting in ³¹P resonances that overlap with the peaks usually ascribed to the interaction of TMPO with Brønsted sites.