Fruit tree model for uptake of organic compounds from soil

Apples and other fruits are frequently cultivated in gardens and are part of our daily diet. Uptake of pollutants into apples may therefore contribute to the human daily intake of toxic substances. In current risk assessment of polluted soils, regressions or models are in use, which were not intended to be used for tree fruits. A simple model for uptake of neutral organic contaminants into fruits is developed. It considers xylem and phloem transport to fruits through the stem. The mass balance is solved for the steady-state, and an example calculation is given. The Fruit Tree Model is compared to the empirical equation of Travis and Arms (T&A), and to results from fruits, collected in contaminated areas. For polar compounds, both T&A and the Fruit Tree Model predict bioconcentration factors fruit to soil (BCF, wet weight based) of >1. No empirical data are available to support this prediction. For very lipophilic compounds (log K OW >5), T&A overestimates the uptake. The conclusion from the Fruit Tree Model is that the transfer of lipophilic compounds into fruits is not relevant. This was also found by an empirical study with PCDD/F. According to the Fruit Tree Model, polar chemicals are transferred efficiently into fruits, but empirical data to verify these predictions are lacking.     

Fruit Tree model for uptake of organic compounds from soil and air†

The current European risk assessment for chemicals considers only tap water, while in reality other beverages play an important role. A good part of beverages are made from fruits, for example apple juice and vine. A mathematical model was developed to predict uptake of neutral organic chemicals from soil and air into fruits. The new fruit tree model considers eight compartments, i.e. two soil compartments, fine roots, thick roots, stem, leaves, fruits, and air. Chemical equilibrium, advective transport in xylem and phloem, diffusive exchange to soil and air and growth dilution are the main processes. The parameterization is for a square-meter of an apple orchard. The model predicts that polar, non-volatile compounds will effectively be transported from soil to fruits, while lipophilic compounds will preferably accumulate from air into fruits. Results from various experiments show no disagreement with the model predictions.     

Fruit Tree model for uptake of organic compounds from soil and air

The current European risk assessment for chemicals considers only tap water, while in reality other beverages play an important role. A good part of beverages are made from fruits, for example apple juice and vine. A mathematical model was developed to predict uptake of neutral organic chemicals from soil and air into fruits. The new fruit tree model considers eight compartments, i.e. two soil compartments, fine roots, thick roots, stem, leaves, fruits, and air. Chemical equilibrium, advective transport in xylem and phloem, diffusive exchange to soil and air and growth dilution are the main processes. The parameterization is for a square-meter of an apple orchard. The model predicts that polar, non-volatile compounds will effectively be transported from soil to fruits, while lipophilic compounds will preferably accumulate from air into fruits. Results from various experiments show no disagreement with the model predictions.     

Contributions to the analysis of organic xenobiotics in fish

For the residue-analysis of fish samples, a method has been developed to separate the medium polar triazines and acetamides together with lipophilic xenobiotics (organochlorine pesticides, PCBs and octachlorostyrene) from fish tissue. The detection limits of the analytes are mostly within the ppt-range (ng/kg fillet) and vary between 40 and 1050 ng/kg fillet of fish. Their recoveries range from 75 to 108%, spiked at 1.5 g/kg. The substances are extracted with a mixture of petroleum ether/ethylacetate (2:1) using a soxhlet apparatus. Subsequently, the lipids in the sample extracts are reduced to 0.4% by gel chromatography. A 5 g silica gel clean-up separates the analytes according to their polarity. First, the lipophilic compounds elute with n-hexane/ethylacetate (91:9) and afterwards the more polar compounds with n-hexane/ethylacetate (1:1). Finally, the organic extracts are concentrated to 150–300 L and the compounds are detected and quantified by GC/MS.     

Lipids and lipophilic components of Viburnum opulus fruits during maturation

The variation of the composition of neutral and polar lipids and lipophilic components during maturation of guelder rose (V. opulus L., fam. Caprifoliaceae) fruits was investigated. During fruit ripening, all lipid groups are accumulated, the highest accumulation rate being observed in the first period of maturation. In nonpolar lipids, this is due to a substantial increase in the content of triacylglycerides, whereas the contents of free fatty acids, methyl esters of fatty acids, monoacylglycerides, and especially esters of triterpenoid compounds decrease. During early maturation, all acyl-containing classes of lipids contain large amounts of saturated fatty acids (mainly, 16:0), whose content decreases during ripening, while the contents of unsaturated 18:1 and 18:2 acids increase.     

Simultaneous trace determination of nine organic UV-absorbing compounds (UV filters) in environmental samples

A new sensitive method has been successfully developed and validated for the simultaneous determination and quantification of nine estrogenic UV filters (benzophenone-1, benzophenone-2, benzophenone-3, benzophenone-4, 4,4-dihydroxybenzophenone, ethyl-4-aminobenzoate, 2-ethyl-hexyl-4-trimethoxycinnamate, 3-(4-methylbenzylidene)-camphor, 3-benzylidene-camphor) in different environmental matrices. After optimisation of extraction conditions for the best recovery of polar to lipophilic compounds from fish tissue and a subsequent lipid clean-up in HPLC, fish extraction recoveries exceeded 72% for all nine UV filters. Identification and quantification of compounds was performed for lipophilic UV filters with gas chromatography-electroionisation-mass spectrometry and for polar and mid-polar compounds with liquid chromatography coupled to electrospray ionisation mass spectrometry. Instrumental detection limits (IDL) varied between 5 and 260 pg injected and method detection limits (MDL) were in the low ng/g lipids range for all test compounds. The described analytical methods are shown to be useful to screen for estrogenic UV filters in environmental samples such as fish and polar organic chemical integrative samplers.     

Carbohydrate rod conjugates: ternary rod-coil molecules forming complex liquid crystal structures

T-shaped polyphilic triblock molecules, consisting of a rodlike p-terphenyl unit, a hydrophilic and flexible laterally attached oligo(oxyethylene) chain terminated by an 1-acylamino-1-deoxy-D-sorbitol unit, and two end-attached lipophilic alkyl chains, have been synthesized by palladium-catalyzed cross-coupling reactions as the key steps. The thermotropic liquid crystalline behavior of these compounds was investigated by polarized light microscopy, differential scanning calorimetry (DSC), and X-ray scattering. We investigated the mode of self-organization as a function of the length and position of the lateral polar chain and the length of the terminal alkyl chains. Depending on the size of the polar and lipophilic segments, a series of unusual liquid crystalline phases was detected. In three of these phases, the space is divided into three distinct periodic subspaces. In addition to a hexagonal channeled layer phase (ChL(hex)) consisting of layers that are penetrated by polar columns, there are also two honeycomb-like network structures formed by square (Col(squ)/p4mm) or pentagonal cylinders (Col(squ)/p4gm). The cylinder walls consist of the terphenyl units fused by columns of alkyl chains, and the interior contains the polar side chains. In addition, a hexagonal columnar phase was observed in which the polar columns are organized in a continuum of terphenyls and alkyl chains with an organization of the terphenyl cores tangentially around the columns with the long axis perpendicular to the columns. For one compound, a reversal of birefringence was observed, which is explained by a reorientation of the terphenyl cores. The addition of protic solvents induces lamellar phases.     

On-line multi-bed sorption trap for VOC analysis of large-volume vapor samples: injection plug width, effects of water vapor and sample decomposition

A multibed on-line sorption trap is used to preconcentrate organic vapors from air samples and inject the analytes into a GC separation column. Injection plug widths depend on the boiling point for the lipophilic compounds and on the polarity and boiling point for the polar compounds. Injection plug widths are sufficiently small (0.7-0.8 s) as to allow the direct injection of the most volatile compounds into the GC column without the need for a second focusing device. The presence of water in the samples has an effect on the retention of polar compounds by the trap. However, this effect is reproducible for a fixed water content and so can be overcome by using calibration standards under the same conditions of humidity as the samples. The thermal decomposition of many volatile organic compounds in an on-line sorption trap during the GC analysis of air samples is examined. The results show that degradation of unstable compounds is governed by the amount of heat transferred to the compounds during desorption (i.e., applied temperature and pulse duration). The use of an on-line trap results in the immediate transfer of desorbed compounds to the analytical column, which can reduce the formation of artifacts.     

Retention mechanism assessment and method development for the analysis of iohexol and its related compounds in hydrophilic interaction liquid chromatography

Hydrophilic interaction liquid chromatography (HILIC) has emerged in recent years as a valuable alternative to reversed-phase liquid chromatography in the analysis of polar compounds. Research in HILIC is divided into two directions: the assessment of the retention mechanism and retention behavior, and the development of HILIC methods. In this work, four polar neutral analytes (iohexol and its related compounds A, B, and C) were analyzed on two silica and two diol columns in HILIC mode with the aim to investigate thoroughly the retention mechanisms and retention behavior of polar neutral compounds on these four columns. The adsorption and partition contribution to the overall HILIC retention mechanism was investigated by fitting the retention data to linear (adsorption and partition) and nonlinear (mixed-retention and quadratic) theoretical models. On the other hand, the establishment of empirical second-order polynomial retention models on the basis of D-optimal design made possible the estimation of the simultaneous influence of several mobile-phase-related factors. Furthermore, these models were also used as the basis for the application of indirect modeling of the selectivity factor and a grid point search approach in order to achieve the optimal separation of analytes. After the optimization goals had been set, the grids were searched and the optimal conditions were identified. Finally, the optimized method was subjected to validation.

Lipophilic rather than hydrophilic photosensitizers show strong adherence to standard cell culture microplates under cell-free conditions

Analysis of photosensitizer (PS) uptake kinetics into tumor cells is a standard cell culture experiment in photodynamic therapy (PDT) - usually performed in plastic microplates or petri dishes. Organic substances such as PS can potentially interact with the plastic surfaces. In this study, we provide a qualitative comparison of three lipophilic PS (hypericin, Foscan? and Photofrin?) and two rather hydrophilic PS formulations (PVP-hypericin and aluminum (III) phthalocyanine tetrasulfonate chloride) regarding their adherence to the surfaces of 96-well microplates obtained from four different manufacturers. For estimation of the relevance of PS adherence for cellular uptake studies we compared the fluorescence signal of the respective PS in microplates containing A431 human epithelial carcinoma cells with microplates incubated with the respective PS under cell-free conditions. We demonstrate that lipophilic PS substances show a strong adherence to microplates - in case of direct lysis and fluorescence measurement resulting in 50% up to 90% of the overall signal to be caused by adherence of the substances to the plastic materials in a cellular uptake experiment. For the hydrophilic compounds, adherence is negligible. Interestingly, adherence of PS agents to microplates takes place in a time-dependent and thus kinetic-like manner, requiring up to several hours to reach a plateau of the fluorescence signal. Furthermore, PS adherence is a function of the PS concentration applied and no saturation effect was observed for the concentrations used in this study. Taken together, this study provides a systematic analysis under which conditions PS adherence to cell culture plates may contribute to the overall fluorescence signal in - for example - PS uptake experiments.     

A new type of square columnar liquid crystalline phases formed by facial amphiphilic triblock molecules

A series of three novel liquid crystalline amphiphilic molecules is reported which are composed of three incompatible molecular parts, a rigid terphenyl core, two lipophilic decyloxy chains in the terminal 4- and 4' '-positions, and a polar group in the lateral 2'-position. The polar group comprises a polyether chain, an amide group, and a polyhydroxyalkyl end group (1-acylamino-1-deoxy-d-sorbitol derivatives). The self-organization of these compounds was studied by polarized light microscopy, differential scanning calorimetry, and different X-ray diffraction techniques. These investigations confirm a novel liquid crystalline phase with a square 2D-lattice (square columnar mesophase, plane group p4mm). This structure is built up by a set of three distinct columns, namely columns containing the polar lateral groups, columns incorporating the alkyl chains, and ribbons of the rodlike terphenyl units. The calamitic cores form walls bounding square-shaped channels occupied by the microsegregated polar lateral chains. The lipophilic columns containing alkyl chains are at the corners interconnecting the aromatic rods end-to-end.     

Smart Shell-by-Shell Nanoparticles with Tunable Perylene Fluorescence in the Organic Interlayer

A new series of shell-by-shell (SbS)-functionalized Al₂O₃ nanoparticles (NPs) containing a perylene core in the organic interlayer as a fluorescence marker is introduced. Initially, the NPs were functionalized with both, a fluorescent perylene phosphonic acid derivative, together with the lipophilic hexadecylphosphonic acid or the fluorophilic (1 H,1 H,2 H,2H-perfluorodecyl)phosphonic acid. The lipophilic first-shell functionalized NPs were further implemented with amphiphiles built of aliphatic chains and polar head-groups. However, the fluorophilic NPs were combined with amphiphiles consisting of fluorocarbon tails and polar head-groups. Depending on the nature of the combined phosphonic acids and the amphiphiles, tuning of the perylene fluorescence can be accomplished due variations of supramolecular organization with the shell interface. Because the SbS-functionalized NPs dispose excellent dispersibility in water and in biological media, two sorts of NPs with different surface properties were tested with respect to biological fluorescent imaging applications. Depending on the agglomeration of the NPs, the cellular uptake differs. The uptake of larger agglomerates is facilitated by endocytosis, whereas individualized NPs cross directly the cellular membrane. Also, the larger agglomerates were preferentially incorporated by all tested cells.     

Matrix effects and selectivity issues in LC-MS-MS

Summary Chlorobenzenes, triazine and phenylurea herbicides were separated by normal micellar electrokinetic chromatography (MEKC) and by micellar electrokinetic chromatography with reversed flow (RF-MEKC) in running buffers containing organic solvents. The relationship between the two techniques is similar to that between reversed-phase and normal-phase HPLC. Using RF-MEKC, the separation of lipophilic compounds is often improved compared to normal MEKC. The migration in MEKC and in RF-MEKC was characterised by lipophilic and polar indices. The experimental values of the lipophilic indices of the compounds tested in the two techniques were close to the indices in reversed-phase HPLC (RP-HPLC). This enables the use of the indices determined in RP-HPLC for predicting the effects of changing composition of the running buffers on migration times in MEKC and in RF-MEKC. Presented at Balaton Symposium '01 on High-Performance Separation Methods, siófok, Hungary, September 2–4, 2001     

Liquid chromatographic determination of the species composition of membrane lipids and their derivatives

This review gives quantitative results of the separation of individual classes of polar glycerolipids of natural and synthetic origin into their individual species. Universal quantitative criteria calculated from the fatty-acid composition of the species obtained or of their mixtures are proposed for determining the degree of reliability of these results. The fractionation of the initial acyl-containing glycerolipids, their N- and O-derivatives with high hydrophobicity, the products of the enzymatic hydrolysis of the native lipids (diacylglycerols, phosphatidic acids) and also the lipophilic O-derivatives of these products is considered. For all these compounds, the results of their separation by the methods of TLC and HPLC both in the form of the adsorption chromatography of the coordination complexes with silver and also in the form of reversed-phase chromatography are discussed.Institute of Plant Physiology of the USSR Academy of Sciences, Moscow. Translated from Khimiya Prirodnykh Soedinenii, No. 4, pp. 453–477, July–August, 1989.     

Liquid chromatographic determination of the species composition of membrane lipids and their derivatives

This review gives quantitative results of the separation of individual classes of polar glycerolipids of natural and synthetic origin into their individual species. Universal quantitative criteria calculated from the fatty-acid composition of the species obtained or of their mixtures are proposed for determining the degree of reliability of these results. The fractionation of the initial acyl-containing glycerolipids, their N- and O-derivatives with high hydrophobicity, the products of the enzymatic hydrolysis of the native lipids (diacylglycerols, phosphatidic acids) and also the lipophilic O-derivatives of these products is considered. For all these compounds, the results of their separation by the methods of TLC and HPLC both in the form of the adsorption chromatography of the coordination complexes with silver and also in the form of reversed-phase chromatography are discussed. Institute of Plant Physiology of the USSR Academy of Sciences, Moscow. Translated from Khimiya Prirodnykh Soedinenii, No. 4, pp. 453–477, July–August, 1989.     

The efficient synthesis of amphiphilic oximes of galactose and glucosamine

New amphiphilic oximes of galactose and glucosamine have been synthesized and characterized. The oxime functionality has been introduced to the first and sixth positions of a nonionic surfactant, consisting of a sugar polar head and a lipophilic side chain. The compounds are soluble in pyridine and sparingly soluble in other polar organic solvents and water.     

Optimization of the polar organic chemical integrative sampler for the sampling of acidic and polar herbicides

This paper presents an optimization of the pharmaceutical Polar Organic Chemical Integrative Sampler (POCIS-200) under controlled laboratory conditions for the sampling of acidic (2,4-dichlorophenoxyacetic acid (2,4-D), acetochlor ethanesulfonic acid (ESA), acetochlor oxanilic acid, bentazon, dicamba, mesotrione, and metsulfuron) and polar (atrazine, diuron, and desisopropylatrazine) herbicides in water. Indeed, the conventional configuration of the POCIS-200 (46 cm² exposure window, 200 mg of Oasis® hydrophilic lipophilic balance (HLB) receiving phase) is not appropriate for the sampling of very polar and acidic compounds because they rapidly reach a thermodynamic equilibrium with the Oasis HLB receiving phase. Thus, we investigated several ways to extend the initial linear accumulation. On the one hand, increasing the mass of sorbent to 600 mg resulted in sampling rates (R _s s) twice as high as those observed with 200 mg (e.g., 287 vs. 157 mL day^?1 for acetochlor ESA). Although detection limits could thereby be reduced, most acidic analytes followed a biphasic uptake, proscribing the use of the conventional first-order model and preventing us from estimating time-weighted average concentrations. On the other hand, reducing the exposure window (3.1 vs. 46 cm²) allowed linear accumulations of all analytes over 35 days, but R _s s were dramatically reduced (e.g., 157 vs. 11 mL day^?1 for acetochlor ESA). Otherwise, the observation of biphasic releases of performance reference compounds (PRC), though mirroring acidic herbicide biphasic uptake, might complicate the implementation of the PRC approach to correct for environmental exposure conditions.

Fast and easy multiresidue method employing acetonitrile extraction/partitioning and "dispersive solid-phase extraction" for the determination of pesticide residues in produce

A simple, fast, and inexpensive method for the determination of pesticide residues in fruits and vegetables is introduced. The procedure involves initial single-phase extraction of 10 g sample with 10 mL acetonitrile, followed by liquid-liquid partitioning formed by addition of 4 g anhydrous MgSO4 plus 1 g NaCl. Removal of residual water and cleanup are performed simultaneously by using a rapid procedure called dispersive solid-phase extraction (dispersive-SPE), in which 150 mg anhydrous MgSO4 and 25 mg primary secondary amine (PSA) sorbent are simply mixed with 1 mL acetonitrile extract. The dispersive-SPE with PSA effectively removes many polar matrix components, such as organic acids, certain polar pigments, and sugars, to some extent from the food extracts. Gas chromatography/mass spectrometry (GC/MS) is then used for quantitative and confirmatory analysis of GC-amenable pesticides. Recoveries between 85 and 101% (mostly > 95%) and repeatabilities typically < 5% have been achieved for a wide range of fortified pesticides, including very polar and basic compounds such as methamidophos, acephate, omethoate, imazalil, and thiabendazole. Using this method, a single chemist can prepare a batch of 6 previously chopped samples in < 30 min with approximately 1 dollar (U.S.) of materials per sample.     

A new equation of state for polar and nonpolar pure fluids

Chung, T.H., Khan, M.M., Lee, L.L. and Starling, K.E., 1984. A new equation of state for polar and nonpolar pure fluids. Fluid Phase Equilibria, 17: 351–372A new equation of state based on the concept of perturbation theory and the hard-convex-body equation of state has been developed successfully for nonpolar compounds. The equation can predict the thermodynamic properties (density, enthalpy departure and vapor pressure) of a wide range of pure fluids from small, spherical (argon-like) molecules to large, structurally complex molecules. For nonpolar compounds, the equation employs three parameters: the shape, size and energy parameters. For normal paraffins, the size parameter (hard-core volume) is related to the measurable van der Waals volume given by Bondi. For most other compounds, it is related to the critical volume. The shape-parameter values reflect the structure and degree of acentricity of the compound of interest. The equation has been extended to polar and associating compounds by using the mean-potential model. For polar compounds, a fourth parameter is required. The equation has been tested extensively for polar (dipolar and quadrupolar) and hydrogen-bonding compounds. The applicability of this equation for such a wide variety of substances provides an important first step in the development of a composition-dependent equation of state for mixtures.     

Pharmacophore identification by molecular modeling and chemometrics: The case of HMG-CoA reductase inhibitors

Summary A methodology based on molecular modeling and chemometrics is applied to identify the geometrical pharmacophore and the stereoelectronic requirements for the activity in a series of inhibitors of 3-hydroxy 3-methylglutaryl coenzyme A (HMG-CoA) reductase, an enzyme involved in cholesterol biosynthesis. These inhibitors present two common structural features—a 3,5-dihydroxy heptanoic acid which mimics the active portion of the natural substrate HMG-CoA and a lipophilic region which carries both polar and bulky groups. A total of 432 minimum energy conformations of 11 homologous compounds showing different levels of biological activity are calculated by the molecular mechanics MM2 method. Five atoms are selected as representatives of the relevant fragments of these compounds and three interatomic distances, selected among 10 by means of a Principal Component Analysis (PCA), are used to describe the three-dimensional disposition of these atoms. A cluster analysis procedure, performed on the whole set of conformations described by these three distances, allows the selection of one cluster whose centroid represents a geometrical model for the HMG-CoA reductase pharmacophore and the conformations included are candidates as binding conformations. To obtain a refinement of the geometrical model and to have a better insight into the requirements for the activity of these inhibitors, the Molecular Electrostatic Potential (MEP) distributions are determined by the MNDO semiempirical method.