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1.
Frank Seela Matthias Zulauf Hans Reuter Guido Kastner 《Acta Crystallographica. Section C, Structural Chemistry》2000,56(4):489-491
The isomorphous structures of the title molecules, 4‐amino‐1‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐3‐iodo‐1H‐pyrazolo‐[3,4‐d]pyrimidine, (I), C10H12IN5O3, and 4‐amino‐3‐bromo‐1‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐1H‐pyrazolo[3,4‐d]pyrimidine, (II), C10H12BrN5O3, have been determined. The sugar puckering of both compounds is C1′‐endo (1′E). The N‐glycosidic bond torsion angle χ1 is in the high‐anti range [?73.2 (4)° for (I) and ?74.1 (4)° for (II)] and the crystal structure is stabilized by hydrogen bonds. 相似文献
2.
Frank Seela Yang He Hans Reuter Eva‐Maria Heithoff 《Acta Crystallographica. Section C, Structural Chemistry》2000,56(8):989-991
In the title compound, 2‐amino‐1‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐5‐methylpyrimidin‐4(1H)‐one, C10H15N3O4, the conformation of the N‐glycosidic bond is syn and the 2‐deoxyribofuranose moiety adopts an unusual OT1 sugar pucker. The orientation of the exocyclic C4′—C5′ bond is +sc (+gauche). 相似文献
3.
Frank Seela Xiaohua Peng Henning Eickmeier Hans Reuter 《Acta Crystallographica. Section C, Structural Chemistry》2004,60(1):o94-o97
The structures of the isomeric nucleosides 4‐nitro‐1‐(β‐d ‐ribofuranosyl)‐1H‐indazole, C12H13N3O6, (I), and 4‐nitro‐2‐(β‐d ‐ribofuranosyl)‐2H‐indazole, C12H13N3O6, (II), have been determined. For compound (I), the conformation of the glycosylic bond is anti [χ = −93.6 (6)°] and the sugar puckering is C2′‐exo–C3′‐endo. Compound (II) shows two conformations in the crystalline state which differ mainly in the sugar pucker; type 1 adopts the C2′‐endo–C3′‐exo sugar puckering associated with a syn base orientation [χ = 43.7 (6)°] and type 2 shows C2′‐exo–C3′‐endo sugar puckering accompanied by a somewhat different syn base orientation [χ = 13.8 (6)°]. 相似文献
4.
Yang He Frank Seela Hans Reuter Eva‐Maria Heithoff 《Acta Crystallographica. Section C, Structural Chemistry》2001,57(5):660-662
In the title compound, 4‐amino‐1‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐1H‐benzotriazole, C11H14N4O3, the conformation of the N‐glycosidic bond is in the high‐anti range [χ = ?77.1 (4)°] and the 2′‐deoxyribofuranose moiety adopts a 2′‐endo (2E) sugar puckering. The 5′‐hydroxyl group is disordered and has conformations ap with γ = 171.1 (3)° [occupation of 61.4 (3)%] and +sc with γ = 52.4 (6)° [occupation of 38.6 (3)%]. The nucleobases are stacked in the crystal state. 相似文献
5.
Frank Seela Yunlong Zhang Kuiying Xu Henning Eickmeier 《Acta Crystallographica. Section C, Structural Chemistry》2005,61(1):o60-o62
In the title compound, 4‐amino‐1‐(2‐deoxy‐β‐d ‐eythro‐pentofuranosyl)‐3‐vinyl‐1H‐pyrazolo[3,4‐d]pyrimidine monohydrate, C12H15N5O3·H2O, the conformation of the glycosyl bond is anti. The furanose moiety is in an S conformation with an unsymmetrical twist, and the conformation at the exocyclic C—C(OH) bond is +sc (gauche, gauche). The vinyl side chain is bent out of the heterocyclic ring plane by 147.5 (5)°. The three‐dimensional packing is stabilized by O—H·O, O—H·N and N—H·O hydrogen bonds. 相似文献
6.
Frank Seela Helmut Rosemeyer Alexander Melenewski Eva‐Maria Heithoff Henning Eickmeier Hans Reuter 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(3):o142-o144
In the monohydrate of 2‐amino‐8‐(2‐deoxy‐α‐d ‐erythro‐pentofuranosyl)‐8H‐imidazo[1,2‐a][1,3,5]triazin‐4‐one, C10H13N5O4·H2O, denoted (I) or αZd, the conformation of the N‐glycosylic bond is in the high‐anti range [χ = 87.5 (3)°]. The 2′‐deoxyribofuranose moiety adopts a C2′‐endo,C3′‐exo(2′T3′) sugar puckering (S‐type sugar) and the conformation at the C4′—C5′ bond is ?sc (trans). 相似文献
7.
Frank Seela Yang He Henning Eickmeier 《Acta Crystallographica. Section C, Structural Chemistry》2003,59(4):o194-o196
In the title compound, 3‐amino‐2‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐6‐methyl‐1,2,4‐triazin‐5(2H)‐one, C9H14N4O4, the conformation of the N‐glycosidic bond is high‐anti and the 2‐deoxyribofuranosyl moiety adopts a North sugar pucker (2T3). The orientation of the exocyclic C—C bond between the –CH2OH group and the five‐membered ring is ap (gauche, trans). The crystal packing is such that the nucleobases lie parallel to the ac plane; the planes are connected via hydrogen bonds involving the five‐membered ring. 相似文献
8.
Anthony Linden A. S. Muhammad Sofian C. Kuan Lee 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(12):o711-o714
At 160 K, the glucopyranosyl ring in 1,6‐dichloro‐1,6‐dideoxy‐β‐d ‐fructofuranosyl 4‐chloro‐4‐deoxy‐α‐d ‐glucopyranoside monohydrate, C12H19Cl3O8·H2O, has a near ideal 4C1 chair conformation, while the fructofuranosyl ring has a 4T3 conformation. The conformation of the sugar molecule is quite different to that of sucralose, particularly in the conformation about the glycosidic linkage, which affects the observed pattern of intramolecular hydrogen bonds. A complex series of intermolecular hydrogen bonds links the sugar and water molecules into an infinite three‐dimensional framework. 相似文献
9.
Davide Viterbo Marco Milanesio Ramn Poms Hernndez Chryslaine Rodríguez Tanty Ivan Cols Gonzlez Marquiza Sabln Carrazana Julio Duque Rodríguez 《Acta Crystallographica. Section C, Structural Chemistry》2000,56(5):580-581
The title compound, 1‐(2′,3′‐dideoxy‐β‐d ‐glycero‐pent‐2‐enofuranosyl)thymine 1‐methyl‐2‐pyrrolidone solvate, C10H12N2O4·C5H9NO, is an NMPO solvate of the anti‐AIDS agent D4T. In its crystal structure, both the pyrimidine and the furanose rings are planar and approximately perpendicular [82.1 (4)°]. The value of the torsion angle defining the orientation of the thymine with respect to the joined furane, χ = ?100.8 (4)°, and that of the torsion angle giving the orientation of the hydroxyl group linked to the furane ring, γ = 52.9 (5)°, show that the glycosylic link adopts the so‐called high‐anti conformation and the 5′‐hydroxyl group is in the +sc position. The NMPO solvate is linked to the nucleoside through a fairly strong hydrogen bond. 相似文献
10.
Anthony Linden A. S. Muhammad Sofian C. Kuan Lee 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(12):o718-o720
At 160 K, one of the Cl atoms in the furanoid moiety of 3‐O‐acetyl‐1,6‐dichloro‐1,4,6‐trideoxy‐β‐d ‐fructofuranosyl 2,3,6‐tri‐O‐acetyl‐4‐chloro‐4‐deoxy‐α‐d ‐galactopyranoside, C20H27Cl3O11, is disordered over two orientations, which differ by a rotation of about 107° about the parent C—C bond. The conformation of the core of the molecule is very similar to that of 3‐O‐acetyl‐1,4,6‐trichloro‐1,4,6‐trideoxy‐β‐d ‐tagatofuranosyl 2,3,6‐tri‐O‐acetyl‐4‐chloro‐4‐deoxy‐α‐d ‐galactopyranoside, particularly with regard to the conformation about the glycosidic linkage. 相似文献
11.
Wenqing Lin Frank Seela Henning Eickmeier Hans Reuter 《Acta Crystallographica. Section C, Structural Chemistry》2004,60(8):o566-o568
In the tricyclic nucleoside 7‐(β‐d ‐ribofuranosyl)‐7H‐imidazo[1,2‐c]pyrazolo[4,3‐e][1,2,3]triazine, C11H12N6O4, the conformation of the N‐glycosyl bond is intermediate between anti and high anti [χ = −103.5 (3)°]. The ribofuranose moiety adopts a 3T2 sugar pucker (S‐type sugar) and the conformation at the exocyclic C—C bond is ap (gauche–trans). Molecules of the title compound form a three‐dimensional network via three medium–strong intermolecular hydrogen bonds (one O—H⋯N and two O—H⋯O bonds). 相似文献
12.
Frank Seela Khalil I. Shaikh Henning Eickmeier 《Acta Crystallographica. Section C, Structural Chemistry》2005,61(3):o151-o153
In the title compound, 2‐amino‐7‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐3,7‐dihydropyrrolo[2,3‐d]pyrimidin‐4‐one, C11H14N4O4, the N‐glycosylic bond torsion angle, χ, is anti [−106.5 (3)°]. The 2′‐deoxyribofuranosyl moiety adopts the 3T4 (N‐type) conformation, with P = 39.1° and τm = 40.3°. The conformation around the exocyclic C—C bond is ap (trans), with a torsion angle, γ, of −173.8 (3)°. The nucleoside forms a hydrogen‐bonded network, leading to a close‐packed multiple‐layer structure with a head‐to‐head arrangement of the bases. The nucleobase interplanar O=C—C⋯NH2 distance is 3.441 (1) Å. 相似文献
13.
Jan W. Bats Uwe Parsch Joachim W. Engels 《Acta Crystallographica. Section C, Structural Chemistry》2000,56(9):1129-1131
Crystals of 4,2′‐anhydro‐5‐(β‐d ‐arabinofuranosyl)uracil, (I), obtained from an aqueous solution, were characterized as the dihydrate, C9H10N2O5·2H2O, (Ia). In air, these crystals slowly transform to the monohydrate, C9H10N2O5·H2O, (Ib), but remain crystalline. The solid‐state transformation proceeds with the loss of one water molecule and a rearrangement of hydrogen‐bonded layers of molecules. The furanose ring in (I) has an approximate C4′‐exo,O4′‐endo twist conformation. The central five‐membered ring is slightly puckered. The uracil group is planar within experimental uncertainty. 相似文献
14.
Frank Seela Anup M. Jawalekar Simone Budow Henning Eickmeier 《Acta Crystallographica. Section C, Structural Chemistry》2005,61(9):o562-o564
In the title compound, 4‐amino‐1‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐6‐methylsulfanyl‐1H‐pyrazolo[3,4‐d]pyrimidine, C11H16N5O3S, the conformation of the glycosidic bond is between anti and high anti. The 2′‐deoxyribofuranosyl moiety adopts the C3′‐exo–C4′‐endo conformation (3T4, S‐type sugar pucker), and the conformation at the exocyclic C—C bond is +sc (+gauche). The exocyclic 6‐amine group and the 2‐methylsulfanyl group lie on different sides of the heterocyclic ring system. The molecules form a three‐dimensional hydrogen‐bonded network that is stabilized by O—H⋯N, N—H⋯O and C—H⋯O hydrogen bonds. 相似文献
15.
Frank Seela Padmaja Chittepu Yang He Henning Eickmeier Hans Reuter 《Acta Crystallographica. Section C, Structural Chemistry》2007,63(3):o173-o176
In 2‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐1,2,4‐triazine‐3,5(2H,4H)‐dione (6‐aza‐2′‐deoxyuridine), C8H11N3O5, (I), the conformation of the glycosylic bond is between anti and high‐anti [χ = −94.0 (3)°], whereas the derivative 2‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐N4‐(2‐methoxybenzoyl)‐1,2,4‐triazine‐3,5(2H,4H)‐dione (N3‐anisoyl‐6‐aza‐2′‐deoxyuridine), C16H17N3O7, (II), displays a high‐anti conformation [χ = −86.4 (3)°]. The furanosyl moiety in (I) adopts the S‐type sugar pucker (2T3), with P = 188.1 (2)° and τm = 40.3 (2)°, while the sugar pucker in (II) is N (3T4), with P = 36.1 (3)° and τm = 33.5 (2)°. The crystal structures of (I) and (II) are stabilized by intermolecular N—H⋯O and O—H⋯O interactions. 相似文献
16.
Paul C. Kline Bruce C. Noll Hongqiu Zhao Anthony S. Serianni 《Acta Crystallographica. Section C, Structural Chemistry》2007,63(2):o137-o140
1‐(β‐d ‐Erythrofuranosyl)cytidine, C8H11N3O4, (I), a derivative of β‐cytidine, (II), lacks an exocyclic hydroxymethyl (–CH2OH) substituent at C4′ and crystallizes in a global conformation different from that observed for (II). In (I), the β‐d ‐erythrofuranosyl ring assumes an E3 conformation (C3′‐exo; S, i.e. south), and the N‐glycoside bond conformation is syn. In contrast, (II) contains a β‐d ‐ribofuranosyl ring in a 3T2 conformation (N, i.e. north) and an anti‐N‐glycoside linkage. These crystallographic properties mimic those found in aqueous solution by NMR with respect to furanose conformation. Removal of the –CH2OH group thus affects the global conformation of the aldofuranosyl ring. These results provide further support for S/syn–anti and N/anti correlations in pyrimidine nucleosides. The crystal structure of (I) was determined at 200 K. 相似文献
17.
Frank Seela Padmaja Chittepu Junlin He Henning Eickmeier 《Acta Crystallographica. Section C, Structural Chemistry》2004,60(12):o884-o886
In the title compound, 2‐(2‐deoxy‐2‐fluoro‐β‐d ‐arabinofuranosyl)‐1,2,4‐triazine‐3,5(2H,4H)‐dione, C8H10FN3O5, the torsion angle of the N‐glycosylic bond is anti [χ = −125.37 (13)°]. The furanose moiety adopts the N‐type sugar pucker (3T2), with P = 359.2° and τm = 31.4°. The conformation around the C4′—C5′ bond is antiperiplanar (trans), with a torsion angle γ of 177.00 (11)°. A network is formed via hydrogen bonds from the nucleobases to the sugar residues, as well as through hydrogen bonds between the sugar moieties. 相似文献
18.
Xiaohua Peng Hans Reuter Henning Eickmeier Frank Seela 《Acta Crystallographica. Section C, Structural Chemistry》2006,62(10):o593-o595
In 4‐chloro‐7‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐7H‐pyrrolo[2,3‐d]pyrimidine‐2,4‐diamine, C11H14ClN5O3, the conformation of the N‐glycosylic bond is between anti and high‐anti [χ = −102.5 (6)°]. The 2′‐deoxyribofuranosyl unit adopts the C3′‐endo‐C4′‐exo (3T4) sugar pucker (N‐type) with P = 19.6° and τm = 32.9° [terminology: Saenger (1989). Landolt‐Börnstein New Series, Vol. 1, Nucleic Acids, Subvol. a, edited by O. Madelung, pp. 1–21. Berlin: Springer‐Verlag]. The orientation of the exocyclic C4′—C5′ bond is +ap (trans) with a torsion angle γ = 171.5 (4)°. The compound forms a three‐dimensional network that is stabilized by four intermolecular hydrogen bonds (N—H⋯O and O—H⋯N) and one intramolecular hydrogen bond (N—H⋯Cl). 相似文献
19.
Kazue Ohkura Wei Yan Sun Koh‐ichi Seki Edward E. Knaus Leonard I. Wiebe 《Acta Crystallographica. Section C, Structural Chemistry》2004,60(11):o789-o791
The title compound, C19H18F2IO6P, prepared as a potential antiviral and anticancer agent from 3‐methylsalicylchlorophosphane and 1‐(2,4‐difluoro‐5‐iodophenyl)‐2‐deoxy‐β‐d ‐ribofuranose, is one of a 1:1 mixture of two diastereomers. The diastereomers differ in their configuration, S or R, at the asymmetric phosphorus center. X‐Ray crystallographic analysis of the title compound has determined the absolute configuration at the asymmetric P center to be S. 相似文献
20.
Simone Budow Henning Eickmeier Hans Reuter Frank Seela 《Acta Crystallographica. Section C, Structural Chemistry》2009,65(12):o645-o648
The title compound, 1‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐5‐(prop‐1‐ynyl)pyrimidin‐2,4(1H,3H)‐dione, C12H14N2O5, shows two conformations in the crystalline state: conformer 1 adopts a C2′‐endo (close to 2E; S‐type) sugar pucker and an anti nucleobase orientation [χ = −134.04 (19)°], while conformer 2 shows an S sugar pucker (twisted C2′‐endo–C3′‐exo), which is accompanied by a different anti base orientation [χ = −162.79 (17)°]. Both molecules show a +sc (gauche, gauche) conformation at the exocyclic C4′—C5′ bond and a coplanar orientation of the propynyl group with respect to the pyrimidine ring. The extended structure is a three‐dimensional hydrogen‐bond network involving intermolecular N—H...O and O—H...O hydrogen bonds. Only O atoms function as H‐atom acceptor sites. 相似文献