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1.
Renate Geßmann Norbert Schiemann Hans Brückner Kyriacos Petratos 《Acta Crystallographica. Section C, Structural Chemistry》2003,59(8):o413-o415
The intramolecular hydrogen‐bonding pattern of Z‐Leu‐Aib‐Pro‐Val‐OBg monohydrate [(N‐benzhydrylamino)carbonylmethyl N‐benzyloxycarbonyl‐α‐aminoisobutyrylprolylvalinate monohydrate], C43H55N5O8·H2O, is unusual for a tetrapeptide because, in addition to a 14 hydrogen bond, a second hydrogen bond of the type 15 is formed. This folding reflects the intramolecular hydrogen‐bonding pattern that this amino acid sequence adopts in the naturally occurring peptaibol alamethicin. 相似文献
2.
M. Ramos Silva A. Matos Beja J. A. Paixo L. Alte da Veiga A. J. F. N. Sobral A. M. d'A. Rocha Gonsalves 《Acta Crystallographica. Section C, Structural Chemistry》2000,56(10):1263-1264
In the title compound, C16H17NO4, the benzyloxycarbonyl group is anti to the pyrrolic N atom. The molecules are joined into head‐to‐head dimers by hydrogen bonds involving the carboxylic acid groups. There is orientational disorder of these groups over two positions with approximately equal occupancy. A weaker hydrogen bond between the pyrrolic N atom and the carbonyl O atom of the benzyloxycarbonyl group joins the dimers into chains running parallel to the [110] direction. 相似文献
3.
A. Bagaria S. Ramakumar M. Gupta V. S. Chauhan 《Acta Crystallographica. Section C, Structural Chemistry》2005,61(3):o174-o176
The title compound (systematic name: 3‐benzylidene‐6‐isobutylpiperazine‐2,5‐dione), C15H18N2O2, an α,β‐dehydrophenylalanine containing diketopiperazine, crystallizes in the space group P1 with two molecules in the asymmetric unit arranged antiparallel to one another. The α,β‐dehydrophenylalanine (ΔPhe) residue in this cyclic peptide retains its planarity but deviates from the standard conformations observed in its linear analogues. Each type of molecule forms a linear chain with molecules of the same type via pairwise N—H⋯O hydrogen bonds, while weaker C—H⋯O interactions link the chains together to form a three‐dimensional network. 相似文献
4.
Nicolas Pradeille Anthony Linden Heinz Heimgartner 《Acta Crystallographica. Section C, Structural Chemistry》2006,62(5):o249-o252
The title compounds, O‐benzyl‐N‐(benzyloxycarbonyl)threonyl‐2,N‐dimethylalaninanilide, C30H35N3O5, and methyl (4R)‐4‐benzyloxy‐N‐(benzyloxycarbonyl)valyl‐2‐(methylalanyl)prolinate, C30H39N3O7, were obtained from the `azirine coupling' of the corresponding protected amino acids with 2,2,N‐trimethyl‐2H‐azirin‐3‐amine and methyl (4R)‐4‐(benzyloxy)‐N‐(2,2‐dimethyl‐2H‐azirin‐2‐yl)prolinate, respectively. The Aib unit in each molecule has the greatest turn‐ or helix‐inducing effect on the molecular conformation. Intermolecular N—H⋯O interactions link the molecules of the tripeptide into sheets and those of the dipeptide into extended chains. 相似文献
5.
Elbieta Jankowska Mirosaw Gilski Mariusz Jasklski Zbigniew Grzonka Leszek ankiewicz 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(6):o353-o354
The crystal structure of the title compound, alternatively called 3‐[4‐(benzyloxy)phenyl]‐2‐(N‐tert‐butoxycarbonyl‐N‐methylamino)propionic acid, C22H27NO5, has been studied in order to examine the role of N‐methylation as a determinant of peptide conformation. The conformation of the tert‐butoxycarbonyl group is trans–trans. The side chain has a folded conformation and the two phenyl rings are effectively perpendicular to one another. The carboxylate hydroxyl group and the urethane carbonyl group form a strong intermolecular O—H?O hydrogen bond. 相似文献
6.
R. Hema V. Parthasarathi S. Thamotharan S. Dubey D. P. Jindal 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(7):o421-o422
In the title compound, C31H40N2O·H2O, the outer two six‐membered rings are in chair conformations, while the central ring is in an 8β,9α‐half‐chair conformation. The five‐membered ring adopts a 13β‐envelope conformation and the cyanobenzylidene moiety has an E configuration with respect to the hydroxyl group at position 17. The steroid nuclei are linked by intermolecular O—H?O and O—H?N hydrogen bonds to form a molecular network. The molecular packing has an interesting feature, with the steroids aligned parallel to the b axis, forming a closed loop through hydrogen bonds linked via water molecules. 相似文献
7.
R. Hema V. Parthasarathi S. Thamotharan S. Dubey D. P. Jindal 《Acta Crystallographica. Section C, Structural Chemistry》2003,59(4):o213-o215
In the title compound, 4‐(3β‐hydroxy‐17‐oxoandrost‐5‐en‐16‐ylidenemethyl)benzonitrile, C27H31NO2, rings A and C of the steroid nucleus are in chair conformations. The central six‐membered ring B is in an 8β,9α‐half‐chair conformation, while the five‐membered ring D adopts a 13β,14α‐half‐chair conformation. The cyanobenzylidene moiety has an E configuration with respect to the carbonyl group at position C17. The dihedral angle between the planes of the steroid nucleus and the cyanobenzylidene moiety is 22.61 (15)°. Intermolecular O—H⃛N hydrogen bonds formed between the hydroxyl group of the steroid and the N atom of the cyanobenzylidene moiety of symmetry‐related molecules link the steroid molecules into chains which run parallel to the b axis. 相似文献
8.
Henrik Birkedal Dieter Schwarzenbach Philip Pattison 《Acta Crystallographica. Section C, Structural Chemistry》2001,57(8):975-977
The crystal structure of the neuroactive artificial dipeptide N‐benzyloxycarbonylprolyl‐d ‐leucine, C19H26N2O5, was solved using synchrotron radiation data collected on a very small crystal (20 × 20 × 380 μm). The molecules form hydrogen‐bonded 21 helices. The acid carbonyl group does not participate in strong hydrogen bonds. This is interpreted as a consequence of close‐packing requirements. 相似文献
9.
Claude Didierjean Guy Boussard Andr Aubry 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(7):o394-o396
The title dipeptide, 1‐(tert‐butoxycarbonyl‐d ‐alanyl)‐N‐isopropyl‐l ‐pipecolamide or Boc‐d ‐Ala‐l ‐Pip‐NHiPr (H‐Pip‐OH is pipecolic acid or piperidine‐2‐carboxylic acid), C17H31N3O4, with a d –l heterochiral sequence, adopts a type II′β‐turn conformation, with all‐trans amide functions, where the C‐terminal amide NH group interacts with the Boc carbonyl O atom to form a classical i+3 i intramolecular hydrogen bond. The Cα substituent takes an axial position [Hα (Pip) equatorial] and the trans pipecolamide function is nearly planar. 相似文献
10.
Carl Henrik Grbitz 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(8):o533-o536
The crystal structure of N‐(l ‐2‐aminobutyryl)‐l ‐alanine, C7H14N2O3, is closely related to the structure of l ‐alanyl‐l ‐alanine, both being tetragonal, while the retro‐analogue 2‐(l ‐alanylamino)‐l ‐butyric acid 0.33‐hydrate, C7H14N2O3·0.33H2O, forms a new type of molecular columnar structure with three peptide molecules in the asymmetric unit. 相似文献
11.
Qingfeng Pan Bruce C. Noll Anthony S. Serianni 《Acta Crystallographica. Section C, Structural Chemistry》2006,62(2):o82-o85
Methyl β‐l ‐lactoside, C13H24O11, (II), is described by glycosidic torsion angles ϕ (O5Gal—C1Gal—O4Glc—C4Glc) and ψ (C1Gal—O1Gal—C4Glc—C5Glc) of 93.89 (13) and −127.43 (13)°, respectively, where the ring atom numbering conforms to the convention in which C1 is the anomeric C atom and C6 is the exocyclic hydroxymethyl (CH2OH) C atom in both residues (Gal is galactose and Glc is glucose). Substitution of l ‐Gal for d ‐Gal in the biologically relevant disaccharide, methyl β‐lactoside [Stenutz, Shang & Serianni (1999). Acta Cryst. C 55 , 1719–1721], (I), significantly alters the glycosidic linkage interface. In the crystal structure of (I), one inter‐residue (intramolecular) hydrogen bond is observed between atoms H3OGlc and O5Gal. In contrast, in the crystal structure of (II), inter‐residue hydrogen bonds are observed between atoms H6OGlc and O5Gal, H6OGlc and O6Gal, and H3OGlc and O2Gal, with H6OGlc serving as a donor with two intramolecular acceptors. 相似文献
12.
Maciej Makowski Anna Brzuszkiewicz Marek Lisowski Tadeusz Lis 《Acta Crystallographica. Section C, Structural Chemistry》2005,61(7):o424-o426
The α,β‐dehydrophenylalanine residues influence the conformation of the title pentapeptide Boc0–Gly1–ΔZPhe2–Gly3–ΔEPhe4–l ‐Phe5–p‐NA ethanol solvate, C42H43N7O9·C2H5OH. The first unsaturated phenylalanyl (ΔZPhe2) and the third glycyl (Gly3) residues form a type I β turn, while the second unsaturated phenylalanyl (ΔEPhe4) and the last phenylalanyl (l ‐Phe5) residues are part of a type II β turn. All the amino acids in the peptide are linked trans to one another. The crystal structure is stabilized by intra‐ and intermolecular hydrogen bonds. 相似文献
13.
Tsonko Kolev Michael Spiteller William S. Sheldrick Heike Mayer‐Figge 《Acta Crystallographica. Section C, Structural Chemistry》2006,62(5):o299-o300
Cations and anions of the title compound {systematic name: 1‐[4‐(aminocarbonyl)butyl]guanidinium bis(hydrogensquarate)}, C6H17N5O2+·2C4HO4−, are connected into a three‐dimensional network by intermolecular N—H⋯O hydrogen bonds between the l ‐argininamidium ammonium, amide and guanidinium functions and the hydrogensquarate carbonyl O atoms. The independent hydrogensquarate monoanions are linked into dimers by pairs of O—H⋯O′ hydrogen bonds. 相似文献
14.
Marius Bruvoll Selma Dizdarevic Nina Fimland Jasmina Hafizovic Carl Henrik Grbitz Helen Therese Kalfjs Kristian Vestli Alexander Krivokapic 《Acta Crystallographica. Section C, Structural Chemistry》2006,62(1):o22-o25
The structures of the title dipeptides, C9H18N2O4·0.33H2O, C12H16N2O4 and C8H16N2O4S·0.34H2O, complete a series of investigations focused on l ‐Xaa‐l ‐serine peptides, where Xaa is a hydrophobic residue. All three structures are divided into hydrophilic and hydrophobic layers. The hydrophilic layers are thin for l ‐phenylalanyl‐l ‐serine, rendered possible by an unusual peptide conformation, and thick for l ‐isoleucyl‐l ‐serine and l ‐methionyl‐l ‐serine, which include cocrystallized water molecules on the twofold axes. 相似文献
15.
Carl Henrik Grbitz 《Acta Crystallographica. Section C, Structural Chemistry》2000,56(12):1496-1498
One of the amino H atoms of l ‐phenylalanyl‐l ‐valine, C14H20N2O3, participates in a rare secondary interaction in being accepted by the aromatic ring of the phenylalanine side chain. The phenyl group is also a donor in a weak hydrogen bond to the peptide carbonyl group. 相似文献
16.
Choudhury M. Zakaria George Ferguson Alan J. Lough Christopher Glidewell 《Acta Crystallographica. Section C, Structural Chemistry》2002,58(4):o204-o208
The adduct 1,6‐diaminohexane–1,1,1‐tris(4‐hydroxyphenyl)ethane (1/2) is a salt {hexane‐1,6‐diyldiammonium–4‐[1,1‐bis(4‐hydroxyphenyl)ethyl]phenolate (1/2)}, C6H18N22+·2C20H17O3?, in which the cation lies across a centre of inversion in space group P. The anions are linked by two short O—H?O hydrogen bonds [H?O 1.74 and 1.76 Å, O?O 2.5702 (12) and 2.5855 (12) Å, and O—H?O 168 and 169°] into a chain containing two types of R(24) ring. Each cation is linked to four different anion chains by three N—H?O hydrogen bonds [H?O 1.76–2.06 Å, N?O 2.6749 (14)–2.9159 (14) Å and N—H?O 156–172°]. In the adduct 2,2′‐bipyridyl–1,1,1‐tris(4‐hydroxyphenyl)ethane (1/2), C10H8N2·2C20H18O3, the neutral diamine lies across a centre of inversion in space group P21/n. The tris(phenol) molecules are linked by two O—H?O hydrogen bonds [H?O both 1.90 Å, O?O 2.7303 (14) and 2.7415 (15) Å, and O—H?O 173 and 176°] into sheets built from R(38) rings. Pairs of tris(phenol) sheets are linked via the diamine by means of a single O—H?N hydrogen bond [H?N 1.97 Å, O?N 2.7833 (16) Å and O—H?N 163°]. 相似文献
17.
Shusheng Zhang Zhongwei Wang Ming Li Kui Jiao Ibrahim Abdul Razak S. Shanmuga Sundara Raj Hoong‐Kun Fun 《Acta Crystallographica. Section C, Structural Chemistry》2001,57(5):566-568
In both the title structures, O‐ethyl N‐(2,3,4,6‐tetra‐O‐acetyl‐β‐d ‐glucopyranosyl)thiocarbamate, C17H25NO10S, and O‐methyl N‐(2,3,4,6‐tetra‐O‐acetyl‐β‐d ‐glucopyranosyl)thiocarbamate, C16H23NO10S, the hexopyranosyl ring adopts the 4C1 conformation. All the ring substituents are in equatorial positions. The acetoxymethyl group is in a gauche–gauche conformation. The S atom is in a synperiplanar conformation, while the C—N—C—O linkage is antiperiplanar. N—H?O intermolecular hydrogen bonds link the molecules into infinite chains and these are connected by C—H?O interactions. 相似文献
18.
Alicja Janik Anna Chyra Katarzyna Stadnicka 《Acta Crystallographica. Section C, Structural Chemistry》2007,63(10):o572-o575
The crystal structure of a protected l ‐tyrosine, namely N‐acetyl‐l ‐tyrosine methyl ester monohydrate, C12H15NO4·H2O, was determined at both 293 (2) and 123 (2) K. The structure exhibits a network of O—H...O and N—H...O hydrogen bonds, in which the water molecule plays a crucial role as an acceptor of one and a donor of two hydrogen bonds. Molecules of water and of the protected l ‐tyrosine form hydrogen‐bonded layers perpendicular to [001]. C—H...π interactions are observed in the hydrophobic regions of the structure. The structure is similar to that of N‐acetyl‐l ‐tyrosine ethyl ester monohydrate [Soriano‐García (1993). Acta Cryst. C 49 , 96–97]. 相似文献
19.
Wenhui Zhang Reagan J. Meredith Allen G. Oliver Ian Carmichael Anthony S. Serianni 《Acta Crystallographica. Section C, Structural Chemistry》2020,76(3):287-297
The crystal structure of methyl 2‐acetamido‐2‐deoxy‐β‐d ‐glycopyranosyl‐(1→4)‐β‐d ‐mannopyranoside monohydrate, C15H27NO11·H2O, was determined and its structural properties compared to those in a set of mono‐ and disaccharides bearing N‐acetyl side‐chains in βGlcNAc aldohexopyranosyl rings. Valence bond angles and torsion angles in these side chains are relatively uniform, but C—N (amide) and C—O (carbonyl) bond lengths depend on the state of hydrogen bonding to the carbonyl O atom and N—H hydrogen. Relative to N‐acetyl side chains devoid of hydrogen bonding, those in which the carbonyl O atom serves as a hydrogen‐bond acceptor display elongated C—O and shortened C—N bonds. This behavior is reproduced by density functional theory (DFT) calculations, indicating that the relative contributions of amide resonance forms to experimental C—N and C—O bond lengths depend on the solvation state, leading to expectations that activation barriers to amide cis–trans isomerization will depend on the polarity of the environment. DFT calculations also revealed useful predictive information on the dependencies of inter‐residue hydrogen bonding and some bond angles in or proximal to β‐(1→4) O‐glycosidic linkages on linkage torsion angles ? and ψ. Hypersurfaces correlating ? and ψ with the linkage C—O—C bond angle and total energy are sufficiently similar to render the former a proxy of the latter. 相似文献
20.
Anne‐Marie Leduc Mark S. Mashuta Arno F. Spatola 《Acta Crystallographica. Section C, Structural Chemistry》2001,57(4):487-488
The small synthetic peptide, benzyl 2‐(tert‐butoxycarbonyl‐amino)isobutyrate, C16H23NO4, has the α‐helical conformation [|?| = 55.8 (2)° and |ψ| = 37.9 (2)°] observed in peptide fragments of peptaibols containing the α‐aminoisobutyric acid (Aib) residue. The structure shows no intramolecular hydrogen bonding, which would disrupt the limited conformational freedom associated with this amino acid. Two weak intermolecular hydrogen contacts are observed. 相似文献