Synthesis,crystal structure,vibrational, optical properties,and a theoretical study of a new Pb(II) complex with bis(1-methylpiperazine-1,4-diium): [C5H14N2]2PbCl6·3H2O

An investigation of the solid-state X-ray structure of the new organic–inorganic compound [C₅H₁₄N₂]₂PbCl₆·3H₂O shows a layered organization of the (PbCl₆)^4– anions, with (R₂NH₂)⁺ groups and water molecules developed in the [001 A. Hu, H.L. Ngo, W. Lin. J. Am. Chem. Soc., 125, 11490 (2003).[Crossref], [PubMed], [Web of Science ®] , [Google Scholar]] plane at x = (2n?+?1)/4. The crystal structure is stabilized by N???H···Cl, N???H···O, O???H···Cl, O???H···O, and C???H···Cl hydrogen bonds. The powder X-ray diffraction and X-ray photoelectron spectroscopic (XPS) analyses confirm the phase purity of the crystal sample. The intermolecular contacts are quantified using the Hirshfeld surfaces computational method. The major inter-contacts contributing to the Hirshfeld surfaces are H…Cl, H…H, and O…H. The vibrational modes were identified and assigned by IR and Raman spectroscopies. The optical properties were investigated by UV–visible and photoluminescence spectroscopic studies. The compound was characterized by thermal analysis to determine its thermal behavior with respect to the temperature. Finally, X-ray photoelectron spectroscopy analysis is reported for analyzing the surface chemistry of [C₅H₁₄N₂]₂PbCl₆·3H₂O.     

[Ni(C_5H_5N)_2(C_7·H_6O_2N)_2]H_2O三元配合物的合成及晶体结构

合成了标题化合物。该化合物的分子式[Ni(C5H5N)2(C7H6O2N)2]H2O(C24H24N4NiO3),分子量475.18,采用单色的MoKα (λ = 0.71073 )射线测定,共收集7408个数据,其中独立衍射点2567个(Rint = 0.0272),I > 2s(I)可观测点数1926个,结果表明该化合物属单斜晶系, 空间群C2/c其晶胞参数为: a = 14.466(2),b = 12.193(2),c = 14.072(2) ;β = 116.229(2)°,V = 2226.6(5) 3,Z = 4,Dc = 1.418 g/cm3 ,μ = 0.905 mm-1,F(000) = 992. 2个水杨醛亚胺各提供2个配位原子参与配位,2个吡啶各提供1个配位原子参与配位,该配合物是六配位的八面体构型,同时讨论了该体系中不同配位原子的配位能力的差异。     

Investigation of the Crystal Structure,Characterization, Hirshfeld Surface,and Theoretical Study of (C6H14N)5[HP2Mo5O23]·4H2O

The synthesis of an organoammonium diphosphopentamolybdates(VI), (C₆H₁₄N)₅[HP₂Mo₅O₂₃] · 4H₂O ( 1 ), is reportet. The molecular structure and spectroscopic analysis were performed using experimental techniques like X‐ray diffraction, FT‐IR, and UV/Vis. The single crystal analysis of the title compound shows that the compound crystallizes in the monoclinic crystal system with space group P2₁/c and cell constants of a = 12.7934(2) Å, b = 14.8145(2) Å, c = 27.2637(5) Å, and β = 92.9298(14)°. The Hirshfeld surfaces and the associated 2D fingerprint plots were investigated to study the intermolecular interactions in the crystal packing and this study has confirmed that the hydrogen bonding interactions play a dominating role in the stability of crystal structure. The theoretical calculations were done using PM3 semi‐empirical model and several properties were studied.     

A Hirshfeld surface analysis,crystal structure,and physicochemical studies of a new Cu(II) complex with the 1,10-phenanthroline ligand

Abstract

The new coordination compound, [Cu(H₂PO₄)₂(C₁₂N₂H₈)H₂O]·2H₂O, was prepared and characterized by physico-chemical studies. In this monomeric complex, the central Cu(II) atom is in a square pyramidal environment and chelated by two nitrogen atoms of 1,10-phenanthroline, two dihydrogeno-monophosphate oxygen atoms and one water oxygen atom. Intermolecular interactions were investigated by Hirshfeld surfaces. The ³¹P NMR spectrum of this paramagnetic complex displays a relatively sharp peak at 2,070?ppm. The vibrational absorption bands were identified by infrared spectroscopy. Electronic properties such as HOMO and LUMO energies were derived.     

Syntheses,Crystal Structures and Properties of Three New Complexes [Ni（C9N2O2H7）2（CH3OH）2],[Zn（C9N2O2H7）2（H2O）2] and [Cd（C9N2O2H7）2（CH3OH）2]

Three novel metal-organic complexes with formulas [Ni(C9N2O2H7)2(CH3OH)2](1),[Zn(C9N2O2H7)2(H2O)2](2) and [Cd(C9N2O2H7)2(CH3OH)2](3) were synthesized by the reactions of Ni,Zn and Cd salts with ethyl 2-benzimidazolylacetate under hydrothermal conditions or layering technique,and characterized by single-crystal X-ray diffraction analysis,IR spec-troscopy,solid-state luminescent properties and thermogravimetric(TG) analysis.The crystal data for these three complexes are as follows:for 1,monoclinic,space group P21/c,a = 9.384(3),b = 9.634(3),c = 11.292(3) ,β = 95.787(5)°,V = 1015.7(5) 3,Z = 2,F(000) = 492,Dc = 1.547 Kg/m3,μ = 1.002 mm-1,the final R = 0.0451 and wR = 0.0900 for 1833 observed reflections with Ⅰ 2σ(Ⅰ);for 2,orthorhombic,space group Pbca,a = 10.031(4),b = 10.379(4),c = 17.525(7),V = 1824.6(12) 3,Z = 4,F(000) = 928,Dc = 1.645 Kg/m3,μ = 1.392 mm-1,the final R = 0.0452 and wR = 0.0996 for 1661 observed reflections with Ⅰ 2σ(Ⅰ);for 3,monoclinic,space group P21/c,a = 9.9114(13),b =10.4852(15),c = 10.4120(14) ,β = 108.453(5)°,V = 1026.4(2) 3,Z = 2,F(000) = 532,Dc = 1.705 Kg/m3,μ = 1.110 mm-1,the final R = 0.0322 and wR = 0.0805 for 1822 observed reflections with Ⅰ 2σ(Ⅰ).In the three complexes,the ethyl 2-benzimidazolylacetate shows the same chelating mode,and the adjacent units are interlinked into a two-dimensional layer through hydrogen-bonds(O-H···O,N-H···O).     

A new six-coordinate organotin(IV) complex of OP[NC5H10]3: A comparison with an analogous five-coordinate complex by means of X-ray crystallography,Hirshfeld surface analysis and DFT calculations

A new six-coordinate organotin(IV)-phosphoric triamide complex of OP[NC₅H₁₀]₃ = OP was synthesized ([Cl₂Sn(CH₃)₂(OP)₂], 1) and characterized by X-ray crystallography and spectroscopic methods (FT-IR, UV–Vis, and ¹H/¹³C/³¹P-NMR). The crystal structures of 1 and the analogous previously reported five-coordinate complex [Cl₂Sn(CH₃)₂(OP)] (IZOVIE) were compared on a structural level and by computational means using Hirshfeld surface analysis, density functional theory calculations and the atom in molecule method. The investigation of intermolecular interactions in the crystal structures of the two complexes by the Hirshfeld surface method indicates that in the absence of normal hydrogen bonds, the chlorine-based interactions H?Cl/Cl?H (for 1 and IZOVIE) and Cl?Sn/Sn?Cl (for IZOVIE) play a determinant role in the molecular assemblies. However, the prominent contacts are of H?H type. From calculated electronic parameters such as bond order, Mulliken charge and electron delocalization energy, it was found that the Sn-OP contact has a lower strength in IZOVIE than in 1, suggesting more ionic character of the metal-oxygen contact in five-coordinate complex IZOVIE. Furthermore, we discuss the similarities and differences of the two complexes 1 and IZOVIE derived from the same ligand OP by density functional theory calculations to present an insight into the organotin(IV)-phosphoric triamide coordination chemistry affected by different geometries and coordination numbers.     

Synthesis,Crystal Structure,and NMR Spectroscopy of a New P-Phenylenediamonium Diphosphate [p-NH3C6H4NH3]H2P2O7

Crystal growth and characterization by X-ray diffraction and NMR spectroscopy of a new p-phenylenediamonium diphosphate [p-NH₃ C ₆ H ₄ NH ₃]H ₂ P ₂ O ₇ are reported. This compound crystallizes in a triclinic unit cell P1 with the parameters a = 7.130(3), b = 9.047(3), c = 9.350(2) Å, α = 133.44(2)°, β = 95.02(2)°, γ = 107.11(4)°, Z = 2, V = 514.3(15) ų, and D _x = 1.848 g.cm^{? 3}. The crystal structure has been solved and refined to R = 0.0273, using 3678 independent reflections. The atomic arrangement is build up by infinite ribbons of [H₂ P ₂ O ₇] ^2? anions, extending along the a-direction at y = 1/2. Between these ribbons are located the p-phenylenediammonium entities, which form hydrogen bonds N─H…O with some external oxygen atoms of phosphoric groups. Crystallographic results are correlated with that of the solid state ¹³C and ³¹P MAS NMR spectroscopy.     

Synthesis,structures and Hirshfeld surface analysis of Ni(II) and Co(III) complexes with N2O donor Schiff base ligand

Two octahedral complexes [NiL(HL)]ClO₄.0.5CH₃OH and [CoL₂]ClO₄ have been synthesized with N₂O donor Schiff base ligand {((2-(phenylamino)ethyl)imino)methyl}phenol (HL) and characterized by spectroscopic techniques and single crystal X-ray diffraction studies. The molar conductivities data of the two complexes show that the complexes are 1:1 electrolyte. Single crystal X-ray diffraction data shows both Ni(II) and Co(III) complexes have distorted octahedral geometry and two ligands are coordinated to the metal centers and one ClO₄⁻ ion outside the coordination sphere. The intermolecular interactions in the complexes are evaluated by Hirshfeld surface analysis and revealed a significant contribution of non- or weakly polar interactions to the packing forces for both molecules, with crystal structure of Co(III) complex featuring short H/H contacts.     

The first coordination compounds of OP[NC4H8O]3 phosphoric triamide ligand: structural study and Hirshfeld surface analysis of SnIV and MnII complexes

The first X-ray crystal structures of coordination compounds of OP[NC₄H₈O]₃ phosphoric triamide (L) are investigated in Cl₂(CH₃)₂Sn(trans-L)₂ (1) and [Mn(H₂O)₄(trans-L)₂]Cl₂·2H₂O (2) as models of molecular and salt complexes for Hirshfeld surface (HS)-based analysis. The crystal packing of 1 includes weak interactions, while in the salt complex 2, a 2-D aggregate, along the (001) plane, is mediated by normal O–H?Cl and O–H?O hydrogen bonds. In the Hirshfeld study, the crystal cohesions of 1 and 2 are recognized via H?H, O?H/H?O, and Cl?H/H?Cl contacts. Among these interactions, hydrogen bonds O–H?Cl occur in the salt structure of 2, as well as some weaker hydrogen interactions as C–H?O (1 and 2), C–H?Cl (1), and O–H?O (2). The full fingerprint plots have nearly symmetric shapes for two independent molecules of 1, while an asymmetric shape appears for the cationic component of 2. To extract more detailed information on close intermolecular contacts, the molecular surface of the previously reported structure L was also mapped. The structure 2 is the first monomeric octahedral Mn(II)–phosphoric triamide complex reported so far. Furthermore, the HS analysis of 2 is the first such study on a cation–anion complex structure including phosphoric triamide ligand.     

Preparation,Crystal Structure and Vibrational Spectra of Ca2P2O6·2H2O and [Ca(H2O)3(H2P2O6)]·0.5(C12H24O6)·H2O

The calcium salts Ca₂P₂O₆ · 2H₂O ( 1 ) and [Ca(H₂O)₃(H₂P₂O₆)] · 0.5(C₁₂H₂₄O₆) · H₂O ( 2 ) were prepared and structurally characterized by single‐crystal X‐ray diffraction. Compound 1 crystallizes in the orthorhombic space group Pbca and compound 2 in the monoclinic space group P2₁/n. The crystal structure of compound 1 consists of chains of edge‐sharing [CaO₇] polyhedra linked by hypodiphosphate(IV) anions to form a three‐dimensional network. The crystal structure of compound 2 consists of alternated layers of crown ether and water molecules and respective ionic units. Within the layers of ionic units the Ca²⁺ cations are octahedrally coordinated by three monodentate dihydrogenhypodiphosphate(IV) anions and three water molecules. The IR/Raman spectra of the title compounds were recorded and interpreted, especially with respect to the [P₂O₆]^4– and [H₂P₂O₆]^2– groups. The phase purity of 2 was verified by powder diffraction measurements.     

Crystal structure of (C2H7N4O)2[UO2(C2O4)2(H2O)]

The single crystals of (C₂H₇N₄O)₂[UO₂(C₂O₄)₂(H₂O)] were studied by X-ray diffraction. The crystals are monoclinic, space group Pn, Z = 2, unit cell parameters: a = 9.4123(2) Å, b = 8.4591(2) Å, c = 11.8740(3) Å, β = 105.500(10)°, V = 911.02(4) ų. The main structural units of the crystals of I are islet complex groups [UO₂(C₂O₄)₂(H₂O)]^2? corresponding to the crystal chemical group AB ₂ ⁰¹ M¹ (A = UO UO ₂ ²⁺ , B⁰¹ = C₂O ₄ ^2? , M = H₂O) of uranyl complexes. Uranium-containing mononuclear complexes are connected into a three-dimensional framework through the electrostatic interactions and hydrogen bonding system involving carbamyolguanidinium ions.     

Crystal Structure,Synthesis, and Properties of tri‐Calcium di‐Citrate tetra‐Hydrate [Ca3(C6H5O7)2(H2O)2]·2H2O

From hydrothermal synthesis needle‐shaped crystals of [Ca₃(C₆H₅O₇)₂(H₂O)₂] · 2H₂O were obtained. The crystal structure was determined by single‐crystal X‐ray experiments and confirmed by powder data (P$\bar{1}$ (no. 2) a = 5.9466(4), b = 10.2247(8), c = 16.6496(13) Å, α = 72.213(7)°, β = 79.718(7)°, γ = 89.791(6)°, V = 947.06(13) Å³, Z = 2, R1 = 0.0426, wR2 = 0.1037). The structure was obtained from pseudo merohedrically polysynthetic twinned crystals using a combined data collection approach and refinement processes. The observed three‐dimensional network is dominated by eightfold coordinated Ca²⁺ cations linked by citrate anions and hydrogen bonds between two non‐coordinating crystal water molecules and two coordinating water molecules.     

Structure,atomic Hirshfeld surface,spectroscopic studies and magnetic and dielectric properties of new mixed solid solution (NH4)2Mn0.17Cu0.83Cl4⋅2H2O

The tetrachlorocupratmanganate dehydrate (NH₄)₂Mn_0.17Cu_0.83Cl₄?2H₂O has been prepared and characterized using various physicochemical techniques including Fourier transform infrared and Raman spectroscopies, differential scanning calorimetry and dielectric and magnetic measurements. A preliminary single‐crystal X‐ray diffraction structural analysis reveals that the title compound belongs to the tetragonal system with P4₍₂₎/mnm space group. The unit cell dimensions are: a = b = 7.5817(2), c = 7.9312(2) Å, with Z = 2. Its crystal structure was determined and refined down to R = 2%. The structure of this compound consists of discrete [Cu/MnCl₄?2H₂O]^2? octahedra interleaved with alkali cations. The cohesion and stabilization of the structure are provided by hydrogen bond interactions (N─H…Cl and O─H…Cl) between [NH₄]⁺ cation and [Cu/MnCl₄?2H₂O]^2? anion. Hirshfeld surface analysis has been performed to explore the behaviour of these weak interactions. Dielectric measurements confirm the transition temperatures determined using differential scanning calorimetry. The temperature dependence of the magnetic susceptibility was measured in the temperature range 10–300 K at various magnetic field intensities. Magnetic measurements reveal the occurrence of weak ferromagnetic behaviour at low temperature (T_c = 12 K). The ferromagnetic ordering is further confirmed by the presence of hysteresis loops.     

Crystal structure analysis,Hirshfeld surface analysis,spectral investigations (FT-IR,FT-R), DFT calculations,ADMET studies and molecular docking of 3H-Methyl-1H-pyrazole-1-carboxamide (3MPC)

On 3H-Methyl-1H-pyrazole-1-carboxamide (3MPC), Single crystal XRD, Fourier Transform Infrared Spectroscopy, Fourier Transform Raman Spectroscopy, Molecular Electrostatic Potential, Density function theoretical analysis and Molecular docking analysis are conducted. The target protein docking experiments revealed that the small molecule (MET) is a good molecule that docks well with several Nav channel 1 targets. Molecular Electrostatic Potential (MEP) aids in the optimization of protein-ligand electrostatic interactions. The molecular surface and hydrogen bonding interactions in the 3MPC crystal structure were located and analyzed using a fingerprint plot and Hirshfeld Surfaces. DFT–B3LYP calculations with the 6-31G (d,p) basis set are used to establish the optimised structure of the MET molecule, and the measured vibrational frequencies are compared to experimental values. The parameters of absorption, distribution, metabolism, excretion (ADME) and toxic (Tox) were assessed using the online server preADMET.     

The Crystal Structures of Two No–Metal Tricyanomelaminates: Diammonium Tricyanomelaminate Dihydrate [NH4]2[C6N9H] · 2 H2O and Dimelaminium Tricyanomelaminate Melamine Dihydrate [C3N6H7]2[C6N9H] · C3N6H6 · 2 H2O

Diammonium tricyanomelaminate dihydrate [NH₄]₂[C₆N₉H] · 2 H₂O ( 1 ) and dimelaminium tricyanomelaminate melamine dihydrate [C₃N₆H₇]₂[C₆N₉H] · C₃N₆H₆ · 2 H₂O ( 2 ) were obtained by metathesis reactions from Na₃[C₆N₉] in aqueous solution and characterized by single‐crystal X‐ray diffraction and ¹⁵N solid‐state NMR spectroscopy ( 1 ). Both salts contain mono‐protonated tricyanomelaminate (TCM) anions and crystallize as dihydrates. Considering charge balance requirements, the crystal structure of 1 (C2/c, a = 3181.8(6) pm, b = 360.01(7) pm, c = 2190.4(4) pm, β = 112.39(3)°, V = 2319.9(8) 10⁶ · pm³) can best be described by assuming a random distribution of an ammonium ion – crystal water pair over two energetically similar sites. Apart from two melaminium cations, 2 (P2₁/c, a = 674.7(5) pm, b = 1123.6(5) pm, c = 3400.2(5) pm, β = 95.398(5), V = 2566(2) 10⁶ · pm³) contains one neutral melamine per formula unit acting as an additional “solvent” molecule and yielding a donor‐acceptor type of π–stacking interaction.