Kinetics of nitroxide spin label removal in biological systems: An in vitro and in vivo ESR study

A systematic study on the disappearance of the electron spin resonance (ESR) signal of nitroxides based on six- or five-membered ring and bearing various charges was carried out in vitro and in vivo. The second-order kinetic rate constants of the reaction of spin probes with ascorbate were measured in vitro at various temperatures in phosphate buffered saline, and the relative activation energies were calculated. Clearance rates of the nitroxide radicals in rat brain homogenates and in blood indicate that the ascorbate contribution to nitroxide removal is about 50–70% in brain and 50–90% in blood. These rates can be easily calculated on the basis of the ascorbate concentration and of the second-order kinetic rate constants measured in phosphate buffered saline. ESR spectra acquired in vivo in rat head and tail, by an L-band resonator, indicated that the nitroxide decay rate is a first-order kinetic process in both domains and that the positively charged nitroxides are not retained in the brain, whereas the anionic and uncharged nitroxides are. Once nitroxides with piperidine ring enter the brain, their decay appears controlled mainly by ascorbate, while the ascorbate has a negligible influence on disappearance in brain of five-membered ring proxyl nitroxides.     

Nitronyl Nitroxides as a Spin Probe in EPR Tomography In Vivo

Recently, new water- and blood-soluble nitronyl nitroxides, 2-(5-methyl-1H-imidazole-4-yl)-4,4,5,5-tetramethyl-4,5-dihydroimidazole-3-oxide-1-oxyl (NN1) and 2-(1H-imidazole-4-yl)-4,4,5,5-tetramethyl-4,5-dihydroimidazole-3-oxide-1-oxyl (NN2), (Fig. 1), were synthesized and used as contrast agents for MRI (Savelov et al. Dokl Academ Nauk 416(4): 493–495, 2007). Taking into account the high rate constants of NN’s reduction by ascorbic acid and other biologically relevant reductants, it is not clear which factors helped with the use of these nitroxides in vivo as a contrast reagent. Moreover, due to high solubility in an aqueous solution and low toxicity (Ovcharenko et al. in Dokl Academ Nauk 404(2):198–200, 2005, Eriksson et al. in Drug Metab Dispos 15(2):155–160, 1987, Afzal et al. in Polyhedron 22(14):1957–1964, 2003) of NNs, it seems possible to use them as a spin probe for NO in vivo with EPR tomography. In this paper, we studied reduction of NN1 and NN2 in model conditions (by ascorbic acid) and in vitro. In addition, the possibility of NN1 and NN2 to be used as paramagnetic probes for L-band EPR imaging in vivo was investigated. Nitric oxide (NO) expression in vivo leads to the decrease in concentrations of NN1, 2 upon the injection in a mouse body, that can be explained by the reaction of studied radicals with NO and fast transformation of the reaction products to diamagnetic species. Pharmacokinetics of NN1, 2 and limitations of their application as contrast agents in MRI are discussed also. Finally, the results of EPR tomography were compared with MRI data. It is shown that the fast reduction of the reaction product of NN with NO—imino nitroxides—is the main obstacle to use NN as a spin probe in vivo.

Relaxation times and line widths of isotopically-substituted nitroxides in aqueous solution at X-band

Optimization of nitroxides as probes for EPR imaging requires detailed understanding of spectral properties. Spin lattice relaxation times, spin packet line widths, nuclear hyperfine splitting, and overall lineshapes were characterized for six low molecular weight nitroxides in dilute deoxygenated aqueous solution at X-band. The nitroxides included 6-member, unsaturated 5-member, or saturated 5-member rings, most of which were isotopically labeled. The spectra are near the fast tumbling limit with T₁∼T₂ in the range of 0.50–1.1 μs at ambient temperature. Both spin–lattice relaxation T₁ and spin–spin relaxation T₂ are longer for ¹⁵N- than for ¹⁴N-nitroxides. The dominant contributions to T₁ are modulation of nitrogen hyperfine anisotropy and spin rotation. Dependence of T₁ on nitrogen nuclear spin state m_I was observed for both ¹⁴N and ¹⁵N. Unresolved hydrogen/deuterium hyperfine couplings dominate overall line widths. Lineshapes were simulated by including all nuclear hyperfine couplings and spin packet line widths that agreed with values obtained by electron spin echo. Line widths and relaxation times are predicted to be about the same at 250 MHz as at X-band.     

Spin Localization in Poly(3-Dodecylthiophen)/PCBM Composite

Charge carriers photoinduced in poly(3-dodecylthiophene)/([6,6]-phenyl-C₆₁-butanoic acid methyl ester) (P3DDT/PCBM) by photons with the energy of 1.88–2.75 eV were investigated by X-band light-induced electron paramagnetic resonance (LEPR). LEPR spectra were attributed to non-interacting polarons and methanofullerene anion radicals with different magnetic and relaxation parameters. A part of these charge carriers are trapped in a polymer matrix. Paramagnetic susceptibility and spin–spin relaxation of mobile charge carriers were shown to follow the activation law.     

Spin-Label EPR for Determining Polarity and Proticity in Biomolecular Assemblies: Transmembrane Profiles

Hyperfine couplings and g-values of nitroxyl spin labels are sensitive to polarity and hydrogen bonding in the environment probed. The dependences of these electronic paramagnetic resonance (EPR) properties on environmental dielectric permittivity and proticity are reviewed. Calibrations are given, in terms of the Block–Walker reaction field and local proton donor concentration, for the nitroxides that are commonly used in spin labeling of lipids and proteins. Applications to studies of the transverse polarity profiles in lipid bilayers, which constitute the permeability barrier of biological membranes, are reviewed. Emphasis is given to parallels with the permeation profiles of oxygen and nitric oxide that are determined from spin-label relaxation enhancements by using nonlinear continuous-wave EPR and saturation recovery EPR, and with permeation profiles of D₂O that are determined by using ²H electron spin echo envelope modulation spectroscopy.     

Isotope selection in distance measurements between nitroxides

Self-assembly of spin-labeled synthetic macromolecules or biomacromolecules can lead to structures that contain more than two nitroxide radicals. Label-to-label distance distributions are then poorly resolved since established electron paramagnetic resonance techniques for distance measurements cannot select between the different pairs of nitroxides. A separation into different contributions can be achieved by partially labeling the nitroxide radicals by (15)N or by deuterium and applying pulse electron electron double resonance techniques. With (15)N labeling, strong suppression of either the (14)N or the (15)N contribution can be achieved by suitable choices of the excitation bandwidths and frequencies of the observer subsequence and pump pulse and linear combination of data sets. With deuterium labeling, interactions between only the isotope-labeled nitroxides can be selected by a two-dimensional version of the four-pulse double electron electron resonance experiment. This selection is based on the deep electron spin echo envelope modulation of deuterated nitroxides.     

Development of isoindoline nitroxides for EPR oximetry in viable systems

Nitroxides are widely used as biophysical probes to study molecular motion, intracellular oxygen, pH, transmembrane potential, and cellular redox metabolism, etc. They may be rapidly metabolized to hydroxylamines by cells, which limits their use in viable systems. In this study, we have characterized relevant properties in cells of several isoindoline nitroxides that have been prepared to have different physicochemical properties: 1,1,3,3-tetramethylisoindolin-2-yloxyl (TMIO) and its analogs 5-carboxy-1,1,3,3-tetramethylisoindolin-2-yloxyl (CTMIO), 5-(N,N,N-trimethylammonio)-1,1,3,3-tetramethyl isoindolin-2-yloxyl iodide (QATMIO) and 2-hydroxy-1,1,3,3-tetramethylisoindoline hydrochloride (TMIOH.HCI). The oxygen sensitivity and metabolic kinetics of these were compared in CHO cells under different oxygen tensions with 1-oxyl-2,2,6,6-tetramethyl-4-piperidione (Tempone) and 3-carboxyl-2,2,5,5-tetramethyl-pyrrolidine-1-oxyl (PCA). Cytotoxicity was evaluated by the measurement of oxygen consumption rates, trypan blue exclusion, and clone formation. TMIO and its analogues have a higher relative oxygen sensitivity than Tempone and PCA with the oxygen sensitivity in electron paramagnetic resonance (EPR) spectrometry in the order of: TMIO=TMIOH=CTMIO>QATMIO=Tempone<PCA. The rates of metabolism of these nitroxides are moderate and depend on oxygen concentration, ring type, ring substituent, and membrane permeation. These nitroxides have low cytotoxicity. The results indicate that TMIO and its analogues are potentially useful for EPR studies of viable systems, especially for oximetry.     

Assessment of Nitrones as In Vivo Redox Sensors

Spin traps such as 5,5-dimethyl-1-pyrroline N-oxide, α-phenyl-tert-butyl nitrone, α-(4-pyridyl-1-oxide)-N-tert-butyl nitrone and newer generation 5-(diethoxyphosphoryl)-5-methyl-1-pyrroline N-oxide analogs have been known for years. What are the desired properties of good probes for measuring in vivo redox reactions in biological systems? These are specificity, sensitivity, rapid, high yield kinetics, low toxicity, high stability and easy to administer and target. Unfortunately, the nitrones perform poorly in almost all of these categories. Typical in vivo concentrations of spin trap approach 100 mM (assuming solubility and toxicity are not an issue), frequently yield 1% nitroxide or less stoichiometry, are typically unstable with time and frequently lack specificity. In vivo electron paramagnetic resonance (EPR) experiments need to have strong signals that correlate with redox chemistry. The resultant signal should be stable and not rapidly interconvert to other diamagnetic species. Fortunately, some newer probes of in vivo redox reactions in biological systems have come upon the horizon. In fact some have been around for a long time, but their virtues are becoming increasingly appreciated. This paper summarizes the disadvantages of nitrones versus the clear advantages of other probes of free radicals, redox state and the like by EPR. It also expands on the properties of nitroxides and nitrones as therapeutics.     

EPR and Quantum Chemical Studies of the pH-sensitive Imidazoline and Imidazolidine Nitroxides with Bulky Substituents

The X- and W-band electron paramagnetic resonance (EPR) spectroscopies were employed to investigate a series of imidazolidine nitroxide radicals with different number of ethyl and methyl substituents at positions 2 and 5 of a heterocycle in liquid and frozen solutions. The influence of the substituents on the line shape and width was studied experimentally and analyzed using quantum chemical calculations. Each pair of the geminal ethyl groups in the positions 2 or 5 of the imidazolidine ring was found to produce an additional hyperfine splitting (hfs) of about 0.2 mT in the EPR spectra of the nitroxides. The effect was attributed to the hfs constant of only one of four methylene hydrogen atoms of two geminal ethyl substituents not fully averaged by ethyl group rotation and ring puckering. In accordance with this assumption, the substitution of hydrogen atoms of CH₂ groups in 2,2,5,5-tetraethyl-substituted imidazolidine nitroxides by deuterium leads to the substantial narrowing of EPR lines which could be useful for many biochemical and biomedical applications, including pH-monitoring. W-band EPR spectra of 2,2,5,5-tetraethyl-substituted imidazolidine nitroxide and its 2,2,5,5-tetraethyl–d₈ deuterium-substituted analog measured at low temperatures demonstrated high sensitivity of their g-factors to pH, which indicates their applicability as spin labels possessing high stability.     

Development and testing of a CW-EPR apparatus for imaging of short-lifetime nitroxyl radicals in mouse head

This article describes a method for reducing the acquisition time in three-dimensional (3D) continuous-wave electron paramagnetic resonance (CW-EPR) imaging. To visualize nitroxyl spin probes, which have a short lifetime in living organisms, the acquisition time for a data set of spectral projections should be shorter than the lifetime of the spin probes. To decrease the total time required for data acquisition, the duration of magnetic field scanning was reduced to 0.5 s. Moreover, the number of projections was decreased by using the concept of a uniform distribution. To demonstrate this faster data acquisition, two kinds of nitroxyl radicals with different decay rates were measured in mice. 3D EPR imaging of 4-hydroxy-2,2,6,6-tetramethylpiperidine-d₁₇-1-¹⁵N-1-oxyl in mouse head was successfully carried out. 3D EPR imaging of nitroxyl spin probes with a half-life of a few minutes was achieved for the first time in live animals.     

Quenching of Long Lifetime Emitting Fluorophores with Paramagnetic Molecules

In this work, we have studied quenching of the fluorescence of two well-known oxygen probes, 1-pyrene butyric acid (PBA) and tris(2,2’-bipyridine)ruthenium ([Ru(bpy)₃]²⁺) by reactive oxygen species (superoxide anion, nitric oxide derivative, hydrogen peroxide) and by the O₂ molecule. Both, time-resolved and steady state fluorescence measurements were performed in solution (ethanol, dimethyl sufoxide, water) and in micelles of Sodium Dodecyl Sulfate that serve as a model for membrane-containing biological structures. We have found that only the free radicals and O₂ can actively quench for the two probes, but not the diamagnetic H₂O₂. Our data correspond to the classical Stern–Volmer equation. H₂O₂ has an effect only at high molar concentrations (>0.1 M). In contrast, effective concentrations of free radicals and O₂ that lead to quenching are in millimolar range. In conclusion, our methods allows for detecting global ROS that are small free radicals without interference from the reactive hydroxyl radical. Our data suggest that the method can be used for the quantification of ROS in individual living cells based on the measurement of fluorescence lifetime of those probes.     

Theoretical spin density in nitroxides

The influence of alkyl substitution on the spin density distribution in nitroxide radicals is studied by performing ab initio UHF calculations on a series of radicals from H₂NO to C₅H₁₀NO. Comparison of spin populations and spin density maps in the series shows a net spin migration from oxygen to nitrogen when hydrogens are replaced by methyl groups. This result does not depend on the size of the alkyl substituents. The substitution effect explains in part the discrepancy between the theoretical spin density in H₂NO and the experimental result obtained by polarized neutron diffraction on tanol suberate biradical C₈H₁₂O₄((CH₃)₄C₅H₅NO)₂.     

Noncovalent Hydrogen Isotope Effects in Paramagnetic Molecules

Zero-point energies (ZPE) of intermolecular, non-bonded vibrations and isotope effects, induced by noncovalent interactions, are computed for paramagnetic molecules. They appear to be not significant for complexation of HO₂ and oxygen with C–H bonds and results to isotope effect, which deviates from unit by 5–10%. However, ZPE and isotope effects in complexes of HO₂ and nitroxyl radicals with water are larger and reach 50–70%. The largest effect, about 12, is found for complexation of hydrogen atom with water. Complexation of nitroxyl and peroxy radicals by hydrogen bonds is accompanied by transfer of spin density of unpaired electron from radical to the ligand molecules and induces high field paramagnetic shifts of the ligand NMR lines. It evidences that the spin transfer via intermolecular bonds occurs by mechanism of spin polarization.     

EPR studies of15N- and2H-substituted pH-sensitive spin probes of imidazoline and imidazolidine types

The isotopically substituted analogs of pH-sensitive imidazoline and imidazolidine radicals have been synthesized and investigated with electron paramagnetic resonance (EPR) spectroscopy. The introduction of²H and¹⁵N into the structure of the radical is a useful approach to enhance the information obtained from spin-labeling experiments. The spectra of the radicals have been analyzed with 9.8 (X-band) and 130 GHz (D-band) EPR spectroscopy. The substitution of¹H for²H leads to significant narrowing of Gaussian line width, while the substitution of¹⁴N for¹⁵N in the nitroxyl fragment decreases both the number of spectral lines and Lorentzian line width. These effects result in a significant increase in the peak intensities up to 5–7 times for X-band EPR spectra of one of the imidazoline radicals (R4). The increase in spectral resolution allowed us to reveal the hyperfine interaction splitting with the attached proton (0.36 G) in the protonated form of the radical R4. The influence of proton exchange of the radicals with phosphate and acetate buffers on their EPR spectra has been studied in H₂O and D₂O. The corresponding rate constants of the proton exchange have been calculated from fitting of the simulated EPR spectra line shapes to experimental spectra. The data obtained demonstrated the advantages of the isotopically substituted spin pH probes in spectral resolution and sensitivity which can be an important factor particularly for applications in vivo where the fundamental sensitivity is much lower. The sensitivity of EPR spectra of these spin probes to the buffer capacity could be of practical importance taking into account the biological relevance of monitoring this parameter in some pathological states.     

High-frequency 263 GHz PELDOR

Pulsed electron–electron double resonance (PELDOR/DEER) at high frequencies can provide information on the relative orientation of paramagnetic centres or spin labels, if those are rigidly oriented in a host biomolecule and experiments are performed with sufficient orientation selectivity. We present the first comparative PELDOR study at 263 and 94 GHz on a model RNA system containing rigid nitroxides. We show that at 263 GHz still considerable modulation depth is observed and orientation selectivity is significant, particularly in g _x–g _y plane of the nitroxides.     

Jahn—Teller coupling in the [Xtilde] 2E ground states of the CF3O and CF3S radicals

The Jahn—Teller and spin—orbit coupling in the ground states of the CF₃O and CF₃S radicals have been investigated experimentally by dispersed fluorescence spectroscopy. These spectra are analysed using a theoretical model that simultaneously includes spin—orbit coupling and multimode Jahn—Teller coupling, both linear and quadratic. We find that in each of these radicals a moderate linear Jahn—Teller effect exists in ν₆, with a much smaller coupling in ν₅. These results are compared and contrasted with those for the related radicals CH₃O and CH₃S. The experimental data and theoretical analyses of these four radicals represent the most thorough investigations to date of the combined effects of spin—orbit and Jahn—Teller coupling.     

Pulsed EPR imaging of nitroxides in mice

Nitroxides, unlike trityl radicals, have shorter T₂s which until now were not detectable in vivo by a time-domain pulsed Electron Paramagnetic Resonance (EPR) spectrometer at 300 MHz since their phase memory times were shorter than the spectrometer recovery times. In the current version of the time-domain EPR spectrometer with improved spectrometer recovery times, the feasibility of detecting signals from nitroxide radicals was tested. Among the nitroxides evaluated, deuterated ¹⁵N-Tempone (¹⁵N-PDT) was found to have the longest T₂. The signal intensity profile as a function of concentration of these agents was evaluated and a biphasic behavior was observed; beyond a nitroxide concentration of 1.5 mM, signal intensity was found to decrease as a result of self-broadening. Imaging experiments were carried out with ¹⁵N-PDT in solutions equilibrated with 0%, 5%, 10%, and 21% oxygen using the single point imaging (SPI) modality in EPR. The image intensity in these tubes was found to depend on the oxygen concentration which in turn influences the T₂ of ¹⁵N-PDT. In vivo experiments were demonstrated with ¹⁵N-PDT in anesthetized mice where the distribution and metabolism of ¹⁵N-PDT could be monitored. This study, for the first time shows the capability to image a cell-permeable nitroxide in mice using pulsed EPR in the SPI modality.     

Interactions between Diamagnetic Metal Ions and pH-Sensitive Nitroxides

Specific interactions between pH-sensitive nitroxide radicals and selected diamagnetic metal ions were investigated. To this end, the influence of different metal salts at varying concentrations on the continuous-wave electron paramagnetic resonance spectra of two imidazoline nitroxides was studied. Among the screened metal ions, Zn(II) most significantly affected the spectral profile, analogous to the effect attributed to protonation of the nitroxide imino nitrogen known from pH studies. Simulations showed the acquired spectra to result from the superposition of the signals of the coordinated and the uncoordinated species. The complex formation between Zn(II) and (4-amino-2,5-dihydro-2,2,5,5-tetramethyl-3-imidazoline-1-yloxyl) was modelled by theoretical methods revealing the rather specific selectivity of the nitroxide toward Zn(II). The results suggest imidazoline nitroxides as promising candidates for the development of new specific metal ion probes.     

pH自旋探针分子的ESR波谱性质和量子化学研究─pH自旋探针应用研究之二

系统研究了咪唑类氮氧自由基作为pH自旋探针的ESR波谱特性．用量子化学方法AM1研究了pH自旋探针分子的几何结构、电子结构及电子自旋密度分布．aN理论值与实验结果基本一致．得到了pka值与电子密度关系曲线．指出了它们在生命科学中的应用前景．