Effect of internal and external conditions on ionization processes in the FAPA ambient desorption/ionization source

Ambient desorption/ionization (ADI) sources coupled to mass spectrometry (MS) offer outstanding analytical features: direct analysis of real samples without sample pretreatment, combined with the selectivity and sensitivity of MS. Since ADI sources typically work in the open atmosphere, ambient conditions can affect the desorption and ionization processes. Here, the effects of internal source parameters and ambient humidity on the ionization processes of the flowing atmospheric pressure afterglow (FAPA) source are investigated. The interaction of reagent ions with a range of analytes is studied in terms of sensitivity and based upon the processes that occur in the ionization reactions. The results show that internal parameters which lead to higher gas temperatures afforded higher sensitivities, although fragmentation is also affected. In the case of humidity, only extremely dry conditions led to higher sensitivities, while fragmentation remained unaffected.     

Surface desorption atmospheric pressure chemical ionization mass spectrometry for direct ambient sample analysis without toxic chemical contamination

Ambient mass spectrometry, pioneered with desorption electrospray ionization (DESI) technique, is of increasing interest in recent years. In this study, a corona discharge ionization source is adapted for direct surface desorption chemical ionization of compounds on various surfaces at atmospheric pressure. Ambient air, with about 60% relative humidity, is used as a reagent to generate primary ions such as H(3)O(+), which is then directed to impact the sample surface for desorption and ionization. Under experimental conditions, protonated or deprotonated molecules of analytes present on various samples are observed using positive or negative corona discharge. Fast detection of trace amounts of analytes present in pharmaceutical preparations, viz foods, skins and clothes has been demonstrated without any sample pretreatment. Taking the advantage of the gasless setup, powder samples such as amino acids and mixtures of pharmaceutical preparations are rapidly analyzed. Impurities such as sudan dyes in tomato sauce are detected semiquantitatively. Molecular markers (e.g. putrescine) for meat spoilage are successfully identified from an artificially spoiled fish sample. Chemical warfare agent stimulants, explosives and herbicides are directly detected from the skin samples and clothing exposed to these compounds. This provides a detection limit of sub-pg (S/N > or = 3) range in MS2. Metabolites and consumed chemicals such as glucose are detected successfully from human skins. Conclusively, surface desorption atmospheric pressure chemical ionization (DAPCI) mass spectrometry, without toxic chemical contamination, detects various compounds in complex matrices, showing promising applications for analyses of human related samples.     

Determination of PASHs by various analytical techniques based on gas chromatography-mass spectrometry: application to a biodesulfurization process

Polycyclic aromatic sulphur heterocyclic (PASH) compounds, such as dibenzothiophene (DBT) and alkylated derivatives are used as model compounds in biodesulfurization processes. The development of these processes is focused on the reduction of the concentration of sulphur in gasoline and gas–oil [D.J. Monticello, Curr. Opin. Biotechnol. 11 (2000) 540], in order to meet European Union and United States directives.

The evaluation of biodesulfurization processes requires the development of adequate analytical techniques, allowing the identification of any transformation products generated. The identification of intermediates and final products permits the evaluation of the degradation process.

In this work, seven sulfurated compounds and one non-sulfurated compound have been selected to develop an extraction method and to compare the sensitivity and identification capabilities of three different gas chromatography ionization modes. The selected compounds are: dibenzothiophene (DBT), 4-methyl-dibenzothiophene (4-m-DBT), 4,6-dimethyl-dibenzothiophene (4,6-dm-DBT) and 4,6 diethyl-dibenzothiophene (4,6 de-DBT), all of which can be used as model compounds in biodesulfurization processes; as well as dibenzothiophene sulfoxide (DBTO₂), dibenzothiophene sulfone (DBTO) and 2-(2-hydroxybiphenyl)-benzenesulfinate (HBPS), which are intermediate products in biodesulfurization processes of DBT [ A. Alcon, V.E. Santos, A.B. Martín, P. Yustos, F. García-Ochoa, Biochem. Eng. J. 26 (2005) 168]. Furthermore, a non-sulfurated compound, 2-hydroxybiphenyl (2-HBP), has also been selected as it is the final product in the biodesulfurization process of DBT [A. Alcon, V.E. Santos, A.B. Martín, P. Yustos, F. García-Ochoa. Biochem. Eng. J. 26 (2005) 168].

Since, typically, biodesulfurization reactions take place in a biphasic medium, two extraction methods have been developed: a liquid–liquid extraction method for the watery phase and a solid phase extraction method for the organic phase. Recoveries of the selected compound in both media were studied. They were in the range of 80–100% for the watery and in the range of 40–60% for the organic phase, respectively.

Gas chromatography coupled to mass spectrometry (GC–MS) has been employed for the identification of these selected compounds. Three different ionization modes were applied: conventional electron impact (EI); positive chemical ionization (PCI), using methane as the reagent gas; and a recently developed ionization mode known as hybrid chemical ionization (HCI), using perfluorotri-n-butylamine as the reagent gas. Limits of detection and identification capabilities have been compared between the three analytical techniques.

The sensitivity of the three analytical techniques was studied and LOD between 0.05 and 1, between 0.09 and 2 and between 0.001 and 0.043 were achieved for PCI, EI and HCI, respectively.

The developed method was applied in samples from a biodesulfurization process. The biodesulfurization reactions were conducted in resting cell operation mode, using Erlenmeyer flasks or an agitated tank bioreactor. The microorganism employed was Pseudomonas putida CECT 5279. The reaction was performed under controlled air flow, stirring and temperature conditions.     

Technological Advancements in Mass Spectrometry and Its Impact on Proteomics

Amalgamation of mass spectrometry (MS) and proteomics has led to the most awaited technological inventions such as discovery of clinically potential biomarkers and generation of effective drugs. This review focuses on the synergistic growth in MS instrumentation, proteomics and its impact on biomedical sciences. Novel ionization methods: surface enhanced laser desorption ionization, electrospray assisted laser desorption ionization, desorption electrospray ionization, laser diode thermal desorption are discussed. Different mass analyzers: ion trap, time-of-flight, Fourier transform ion cyclotron resonance and their applications are outlined. New ion fragmentation techniques: electron capture dissociation, electron transfer dissociation, infrared multiphoton dissociation and their attributes are described.     

Electronic polarization effects in the photodissociation of Cl2

Velocity mapped ion imaging and resonantly enhanced multiphoton ionization time-of-flight methods have been used to investigate the photodissociation dynamics of the diatomic molecule Cl(2) following excitation to the first UV absorption band. The experimental results presented here are compared with high level time dependent wavepacket calculations performed on a set of ab initio potential energy curves [D. B. Kokh, A. B. Alekseyev, and R. J. Buenker, J. Chem. Phys. 120, 11549 (2004)]. The theoretical calculations provide the first determination of all dynamical information regarding the dissociation of a system of this complexity, including angular momentum polarization. Both low rank K = 1, 2 and high rank K = 3 electronic polarization are predicted to be important for dissociation into both asymptotic product channels and, in general, good agreement is found between the recent theory and the measurements made here, which include the first experimental determination of high rank K = 3 orientation.     

Critical assessment of ionization patterns and applications of ambient desorption/ionization mass spectrometry using FAPA–MS

Ambient desorption/ionization mass spectrometry (MS) has gained growing interest during the last decade due to its high analytical performance and yet simplicity. Here, one of the recently developed ambient desorption/ionization MS sources, the flowing atmospheric‐pressure afterglow (FAPA) source, was investigated in detail regarding background ions and typical ionization patterns in the positive as well as the negative ion mode for a variety of compound classes, comprising alkanes, alcohols, aldehydes, ketones, carboxylic acids, organic peroxides and alkaloids. A broad range of signals for adducts and losses was found, besides the usually emphasized detection of quasimolecular ions, i.e. [M + H]⁺ and [M ? H]^? in the positive and the negative mode, respectively. It was found that FAPA–MS is best suited for polar analytes containing nitrogen and/or oxygen functionalities, e.g. carboxylic acids, with low molecular weights and relatively high vapor pressures. In addition, the source was used in proof‐of‐principle studies, illustrating the capabilities and limitations of the technique: Firstly, traces of cocaine were detected and unambiguously identified on euro banknotes using FAPA ionization in combination with tandem MS, suggesting a correlation between cocaine abundance and age of the banknote. Secondly, FAPA–MS was used for the identification of acidic marker compounds in organic aerosol samples, indicating yet‐undiscovered matrix and sample surface effects of ionization pathways in the afterglow region. Copyright © 2016 John Wiley & Sons, Ltd.     

GC/MS on an LC/MS instrument using atmospheric pressure photoionization

Atmospheric pressure (AP) GC/MS was first introduced by Horning et al. [E.C. Horning, M.G. Horning, D.I. Carroll, I. Dzidic, R.N. Stillwell, Anal. Chem. 45 (1973) 936] using ⁶³Ni as a beta-emitter for ionization. Because, at the time special instrumentation was required, the technique was only applied with consistency to negative ion environmental studies where high sensitivity was required [T. Kinouchi, A.T.L. Miranda, L.G. Rushing, F.A. Beland, W.A. Korfmacher, J. High Resolut. Chromatogr., Chromatogr. Commun. 13 (1990) 281]. Currently, AP ion sources are commonly available on LC/MS instruments and recently a method was reported for converting an AP-LC/MS ion source to a combination AP-LC/MS:GC/MS source [C.N. McEwen, R.G. McKay, J. Am. Soc. Mass Spectrom. 16 (2005) 1730]. Here, we report the use of atmospheric pressure photoionization (APPI) with GC/MS and compare this to AP chemical ionization (APCI) GC/MS and electron ionization (EI) GC/MS. Using a nitrogen purge gas, we observe excellent chromatographic resolution and abundant molecular M⁺ and MH⁺ ions as well as structurally significant fragment ions. Comparison of a 9.8 eV UV lamp with a 10.6 eV lamp, as expected, shows that the higher energy lamp gives more universal ionization and more fragment ions than the lower energy lamp. While there are clear differences in the fragment ions observed by APPI-MS versus EI-MS, there are also similarities. As might be expected from the ionization mechanism, APPI ionization is similar to low energy EI. These odd electron fragment ions are useful in identifying unknown compounds by comparison to mass spectra in computer libraries.     

Analysis of lipids with desorption atmospheric pressure photoionization‐mass spectrometry (DAPPI‐MS) and desorption electrospray ionization‐mass spectrometry (DESI‐MS)

In this article, the effect of spray solvent on the analysis of selected lipids including fatty acids, fat‐soluble vitamins, triacylglycerols, steroids, phospholipids, and sphingolipids has been studied by two different ambient mass spectrometry (MS) methods, desorption electrospray ionization‐MS (DESI‐MS) and desorption atmospheric pressure photoionization‐MS (DAPPI‐MS). The ionization of the lipids with DESI and DAPPI was strongly dependent on the spray solvent. In most cases, the lipids were detected as protonated or deprotonated molecules; however, other ions were also formed, such as adduct ions (in DESI), [M‐H]⁺ ions (in DESI and DAPPI), radical ions (in DAPPI), and abundant oxidation products (in DESI and DAPPI). DAPPI provided efficient desorption and ionization for neutral and less polar as well as for ionic lipids but caused extensive fragmentation for larger and more labile compounds because of a thermal desorption process. DESI was more suitable for the analysis of the large and labile lipids, but the ionization efficiency for less polar lipids was poor. Both methods were successfully applied to the direct analysis of lipids from pharmaceutical and food products. Although DESI and DAPPI provide efficient analysis of lipids, the multiple and largely unpredictable ionization reactions may set challenges for routine lipid analysis with these methods. Copyright © 2012 John Wiley & Sons, Ltd.     

The nature of collision-induced dissociation processes of doubly protonated peptides: comparative study for the future use of matrix-assisted laser desorption/ionization on a hybrid quadrupole time-of-flight mass spectrometer in proteomics.

Comparative MS/MS studies of singly and doubly charged electrospray ionization (ESI) and matrix-assisted laser desorption/ionization (MALDI) precursor peptide ions are described. The spectra from these experiments have been evaluated with particular emphasis on the data quality for subsequent data processing and protein/amino acid sequence identification. It is shown that, once peptide ions are formed by ESI or MALDI, their charge state, as well as the collision energy, is the main parameter determining the quality of collision-induced dissociation (CID) MS/MS fragmentation spectra of a given peptide. CID-MS/MS spectra of singly charged peptides obtained on a hybrid quadrupole orthogonal time-of-flight mass spectrometer resemble very closely spectra obtained by matrix-assisted laser desorption/ionization post-source decay time-of-flight mass spectrometry (MALDI-PSD-TOFMS). On the other hand, comparison of CID-MS/MS spectra of either singly or doubly charged ion species shows no dependence on whether ions have been formed by ESI or MALDI. This observation confirms that, at the time of precursor ion selection, further mass analysis is effectively decoupled from the desorption/ionization event. Since MALDI ions are predominantly formed as singly charged species and ESI ions as doubly charged, the associated difference in the spectral quality of MS/MS spectra as described here imposes direct consequences on data processing, database searching using ion fragmentation data, and de novo sequencing when ionization techniques are changed.     

Using fluorescence dyes as a tool for analyzing the MALDI process

In a recent paper (Setz, P. D.; Knochenmuss, R. Phys. Chem. A2005, 109, 4030-4037) energy-transfer from excited matrix molecules to fluorescent traps was used to study the role of pooling reactions for the ionization processes in matrix-assisted laser desorption ionization (MALDI) using 2,5-dihydroxybenzoic acid as matrix. Exciton trapping was shown to interfere with matrix ionization. These investigations were extended to analyze the influence of fluorescent traps on both matrix and analyte ions for alpha-cyano-4-hydroxycinnamic acid and further matrices. A strong influence of the fluorescent traps on both matrix and analyte ionization was revealed, depending on the matrix:trap ratio, and manifested itself differently for low and high mass analytes. The observations are rationalized by the intermediate formation of a "hot spot" due to an efficient conversion of electronic excitation energy to vibronic energy within the fluorescent traps. This process favors the desorption and ionization of small vaporizable analytes and compromises the cluster ablation process needed for larger analyte ions.     

Theoretical and experimental studies on the Raman spectra of electrosynthesized polynaphthalene

Polynaphthalene (Pnap) was electrosynthesized through the direct oxidation of naphthalene in boron trifluoride diethyl etherate and was characterized with IR and Raman spectroscopy, matrix‐assisted laser desorption/ionization time‐of‐flight mass spectroscopy, and thermogravimetric analysis. Raman spectra of oligonaphthalene were calculated with Gaussian 98 at the B3LYP/6‐31G* level. Combining the computational and experimental results, we assigned the Raman bands of pristine Pnap. The Raman bands related to the chain‐stretching vibrations of Pnap around 1600 cm^?1 shifted to higher wave numbers as the polymerization degree increased. This phenomenon was in contrast to that of other conducting polymers bearing simple aromatic rings, such as polythiophene and polyfuran. The reason was that the condensed ring of Pnap and the steric repulsion of the interring hydrogen atoms prevented the elongation of conjugation sequences with the polymer chain length. © 2004 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 43: 241–251, 2005     

Characterization of low and intermediate molecular weight hydrogen silsesquioxanes by mass spectrometry

Hydrogen silsesquioxanes (HSQ or H-resin), represented by (HSiO3/2)2n or TH(2n), are an important class of polymers that have gained popularity as spin-on dielectrics by the electronic industry. Previously in the literature, small oligomeric species such as (HSiO3/2)2n, where n = 4-16, have been identified by GC-MS. However, nondestructive mass spectral results for larger H-resin molecules have not been reported, likely due to the nonpolar nature of these molecules. We have utilized a number of "soft" ionization techniques such as field desorption (FD), desorption chemical ionization (DCI), and matrix-assisted laser desorption/ionization (MALDI), and demonstrated that they are amenable to hydrogen silsesquioxanes. The [TH(2n) - H]+* ions were observed by FD-MS while [TH(2n) + NH4]+ and [TH(2n) + Na]+ ions were found utilizing DCI and MALDI, respectively. Based upon the MS results, the polymer compositions as well as molecular weight information can be easily obtained. The detailed structures of H-resin components, however, remain a difficult issue, which cannot be answered by MS data alone. With these preliminary MS results, we have clearly demonstrated that mass spectrometry with the above-mentioned ionization techniques is an invaluable tool that can be utilized when attempting to solve the challenge set forth by the complexity of hydrogen silsesquioxane materials.     

Structural analysis of lipid A from Escherichia coli O157:H7:K- using thin-layer chromatography and ion-trap mass spectrometry

Rapid separation and structural identification of lipid A from Escherichia coli were performed using thin-layer chromatography (TLC) and mass spectrometry (MS). After the resolved spot of the lipid A had been scraped from TLC plate, the sample was re-extracted from the removed powder with chloroform-methanol (2 : 1, v/v) and analyzed by matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) and electrospray ionization (ESI) ion-trap MS. For detailed structural characterization, multiple-stage mass analysis (MS(4)) of the major species in ESI-MS/MS provided important information about the series of fragment ions. The dominant fragment ions in each MS stage were produced from the loss of fatty acyl groups mainly driven by charge-remote processes, and this information about the fragment ions can be used to deduce the composition or the position of the fatty acid substituent in the lipid A. In contrast, MALDI-TOFMS indicated that fragmentation resulted from charge-driven processes. Molecular mass profiling and fragmentation analysis provides essential information for clarifying the detailed structure of the lipid A from E. coli O157:H7:K(-).     

嗜酸性氧化亚铁硫杆菌代谢产物的常压化学电离质谱分析

本研究以721矿和745矿嗜酸性氧化亚铁硫杆菌为研究对象,采用常压化学电离质谱直接分析其代谢产物,分别考察了顶空采样( Headspace sampling)、界面采样( Interface sampling)和中性解吸采样( Neutral desorption sampling)3种进样方式对电离效果的影响。在优化条件下,常压化学电离质谱对微生物纯菌种和混合菌种的代谢产物均具有良好的分析能力,可根据获得的代谢产物指纹谱图结合主成分分析( PCA)方法和聚类分析( CA)方法区分2个放射性强弱不同区域共4类嗜酸性微生物样品,并对主要胺类、酯类等代谢成分进行串联质谱鉴定,为耐辐射微生物的相关研究提供了一种可借鉴的分析方法。     

Matrix‐assisted laser desorption/ionization time‐of‐flight analysis of the copolymerization reaction of an expanding monomer with a diepoxide

In search of a composite with low stress and low shrinkage properties, this study includes matrix‐assisted laser desorption/ionization time‐of‐flight analysis of the photoinitiated cationic polymerization between an expanding monomer [1,5,7,11‐tetraoxaspiro[5.5]undecane (TOSU)] and a diepoxide [bisphenol A diglycidyl ether (BADGE)]. Past studies using NMR and differential scanning calorimetry analyses concluded copolymerization indirectly on the basis of deviations from homopolymer product data. This is the first study to provide direct evidence of copolymerization between these species. Unlike previous research, this study enables the identification of the TOSU homopolymer and the absence of the BADGE homopolymer, suggesting initial cationic activation of TOSU. In addition to peaks that correspond to the presumed mechanism for six‐membered TOSU polymerization, many peaks have a net gain or loss of cyclic carbonate in support of a new polymerization mechanism participating in the reaction. © 2005 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 43: 5962–5970, 2005     

Ultra‐rapid non‐equilibrium solid‐phase microextraction at elevated temperatures and direct coupling to mass spectrometry for the analysis of lidocaine in urine

Solid‐phase microextraction (SPME) has been directly coupled to an ion‐trap mass spectrometer (MS) for the determination of the model compound lidocaine in urine, hereby applying MS/MS [fragmentation of [M + H]⁺ (m/z 235) to a fragment with m/z 86]. The throughput of samples has been increased using non‐equilibrium SPME with polydimethylsiloxane (PDMS) fibers. The effect of temperature on the sorption and the desorption was studied. Elevated temperatures during sorption (65°C) and desorption (55°C) had a considerable influence on the speed of the extraction. The desorption was carried out with a home‐made desorption chamber allowing thermostating. Only 1 min sorption and 1 min desorption were performed, after which MS detection took place, resulting in a total analysis time of 3 min. Detection limits below 1 ng/mL could be obtained despite yields of only 2.1 and 1.5% for a 100‐ and a 30‐μm PDMS‐coated fiber, respectively. Furthermore, the determination of lidocaine in urine had acceptable reproducibilities, i.e., relative standard deviations (RSDs) below 10%. A limit of quantitation (RSD < 15%) of about 1 ng/mL was obtained. No extra wash step of the extraction fiber was required after desorption if a 30‐μm coating was used, whereas not all the analyte was desorbed from the 100‐μm coating in a single desorption. Therefore, the SPME‐MS/MS system with a 30‐μm PDMS‐coated fiber for rapid non‐equilibrium SPME at elevated temperatures has interesting potential for high‐throughput analysis of biological samples.     

Ambient mass spectrometry: bringing MS into the “real world”

Mass spectrometry has recently undergone a second contemporary revolution with the introduction of a new group of desorption/ionization (DI) techniques known collectively as ambient mass spectrometry. Performed in an open atmosphere directly on samples in their natural environments or matrices, or by using auxiliary surfaces, ambient mass spectrometry (MS) has greatly simplified and increased the speed of MS analysis. Since its debut in 2004 there has been explosive growth in the applications and variants of ambient MS, and a very comprehensive set of techniques based on different desorption and ionization mechanisms is now available. Most types of molecules with a large range of masses and polarities can be ionized with great ease and simplicity with the outstanding combination of the speed, selectivity, and sensitivity of MS detection. This review describes and compares the basis of ionization and the concepts of the most promising ambient MS techniques known to date and illustrates, via typical analytical and bioanalytical applications, how ambient MS is helping to bring MS analysis deeper than ever into the “real world” open atmosphere environment—to wherever MS is needed.     

Synthesis and characterization of two new bulky tris(mercaptoimidazolyl)borate ligands and their zinc and cadmium complexes

The sodium salts of the tris(2-mercapto-1-benzylimidazolyl)borate [Tm^Bz]⁻ and tris(2-mercapto-1-p-tolylimidazolyl)borate [Tm^p-Tol]⁻ anions have been readily prepared in very good yield from NaBH₄ and 2-mercapto-1-benzylimidazole or 2-mercapto-1-p-tolylimidazole, respectively. These new monoanionic tripodal sulfur-donor ligands have been used to prepare the Group 12 derivatives (Tm^R)MBr (M=Zn, Cd; R=Bz, p-Tol), all of which have been characterized by a combination of analytical and spectroscopic techniques, including electrospray ionization mass spectrometry (ESI MS) and, in the case of both benzyl-substituted derivatives, single-crystal X-ray diffraction.     

Ion mobility–mass spectrometry: a new paradigm for proteomics

Matrix-assisted laser desorption/ionization (MALDI) coupled with ion mobility–mass spectrometry (IM–MS) provides a rapid (μs–ms) means for the two-dimensional (2D) separation of complex biological samples (e.g., peptides, oligonucleotides, glycoconjugates, lipids, etc.), elucidation of solvent-free secondary structural elements (e.g., helices, β-hairpins, random coils, etc.), rapid identification of post-translational modifications (e.g., phosphorylation, glycosylation, etc.) or ligation of small molecules, and simultaneous and comprehensive sequencing information of biopolymers. In IM–MS, protein-identification information is complemented by structural characterization data, which is difficult to obtain using conventional proteomic techniques. New avenues for enhancing the figures of merit (e.g., sensitivity, limits of detection, dynamic range, and analyte selectivity) and optimizing IM–MS experimental parameters are described in the context of deriving new information at the forefront of proteomics research.     

Matrix-assisted and polymer-assisted laser desorption/ionization time-of-flight mass spectrometric analysis of low molecular weight polystyrenes and polyethylene glycols

Recently, matrices based on oligomers of dioxin and thiophene (polymer-assisted laser desorption/ionization (PALDI)) have been described for mass spectrometric (MS) analysis of low molecular weight compounds (Woldegiorgis A, von Kieseritzky F, Dahlstedt E, Hellberg J, Brinck T, Roeraade J. Rapid Commun. Mass Spectrom. 2004; 18: 841-852). In this paper, we report the use of PALDI matrices for low molecular weight polymers. An evaluation with polystyrene and polyethylene glycol showed that no charge transfer ionization occurs. Ionization is mediated through metal ion adduction. Comparison of matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) data for two very low molecular weight polymers with data obtained from size-exclusion chromatography (SEC) revealed a systematic difference regarding mean molecular weight and dispersity. Further, the mass spectra obtained with PALDI matrices had a higher signal-to-noise ratio than the spectra obtained with conventional matrices. For polymers with higher molecular weights (>1500 Da), the conventional matrices gave better performance. For evaluation of the MALDI spectra, three non-linear mathematical models were evaluated to model the cumulative distributions of the different oligomers and their maximal values of Mw, Mn and PDI. Models based on sigmoidal or Boltzmann equations proved to be most suitable. Objective modeling tools are necessary to compare different sample and instrumental conditions during method optimization of MALDI analysis of polymers, since the bias between MALDI and SEC data can be misleading.