Reductive desorption of thiolate from monolayer protected gold clusters

The "electrochemical potential window" of monolayer-protected gold cluster (MPC) nanoelectrodes is probed where the electrified liquid-liquid interface is used as the detector. The first observation of the reductive desorption of thiolate at negative MPC core charge is reported.     

Interaction of amino acids with gold and silver clusters

Binding of gold and silver clusters with amino acids (glycine and cysteine) was studied using density functional theory (DFT). Geometries of neutral, anionic, and cationic amino acids with Au3 and Ag3 clusters were optimized using the DFT-B3LYP approach. The mixed basis set used here was denoted by 6-31+G** (union or logical sum)LANL2DZ. This work demonstrated that the interaction of amino acids with gold and silver clusters is governed by two major bonding factors: (a) the anchoring N-Au(Ag), O-Au(Ag), and S-Au(Ag) bonds and (b) the nonconventional N-H...Au(Ag) and O-H...Au(Ag) hydrogen bonds. Among the three forms of amino acids, anionic ones exhibited the most tendency to interact with the Au and Ag clusters. Natural bond orbital analysis was performed to calculate charge transfer, natural population analysis, and Wiberg bond indices of the complexes. Atoms-in-molecules theory was also applied to determine the nature of interactions. It was shown that these bonds are partially electrostatic and partially covalent.     

Chalcogen-rich lanthanide clusters with fluorinated thiolate ligands

Mixtures of Ln(SC(6)F(5))(3) and Ln(EPh)(3) (E = S, Se) react with elemental E to give chalcogen-rich clusters with fluorinated thiolate ancillary ligands. The structures of both (THF)(6)Yb(4)S(SS)(4)(SC(6)F(5))(2) and (THF)(6)Yb(4)Se(SeSe)(4)(SC(6)F(5))(2) have been established by low-temperature single-crystal X-ray diffraction. Both compounds contain a square array of Yb(III) ions connected by a central mu(4)-E(2-) ligand. The edges of the square Yb(4) array are bridged by four mu(2)(EE) ligands, and two terminal SC(6)F(5) are on the same side of the Ln(4) plane that is capped by the mu(4)-E(2-) ion. Redox inactive (THF)(6)Tm(4)Se(SeSe)(4)(SC(6)F(5))(2) was also prepared to establish the extension of this chemistry to the redox inactive Ln. These clusters are soluble in toluene.     

Incremental binding energies of gold(I) and silver(I) thiolate clusters

Density functional theory is used to find incremental fragmentation energy, overall dissociation energy, and average monomer fragmentation energy of cyclic gold(I) thiolate clusters and anionic chain structures of gold(I) and silver(I) thiolate clusters as a measure of the relative stability of these systems. Two different functionals, BP86 and PBE, and two different basis sets, TZP and QZ4P, are employed. Anionic chains are examined with various residue groups including hydrogen, methyl, and phenyl. Hydrogen and methyl are shown to have approximately the same binding energy, which is higher than phenyl. Gold-thiolate clusters are bound more strongly than corresponding silver clusters. Lastly, binding energies are also calculated for pure Au(25)(SR)(18)(-), Ag(25)(SR)(18)(-), and mixed Au(13)(Ag(2)(SH)(3))(6)(-) and Ag(13)(Au(2)(SH)(3))(6)(-) nanoparticles.     

Discontinuum between a thiolate and a thiol ligand

The effect of H-bond donation to the thiolate ligand of (eta(5)-C(5)H(5))Fe(CO)(2)SR (1) to give H-bond adducts (1 small middle dotHX) and eventually protonation to give [(eta(5)-C(5)H(5))Fe(CO)(2)(HSR)](+) (1H(+)()) has been investigated experimentally and computationally. The electronic structures of 1(R = Me), several derivatives of 1(R = Me) small middle dotHX, and 1(R = Me)H(+)() have been investigated using DFT (density functional theory) computational methods. As previously suggested, these calculations indicate the HOMO of 1 is Fedpi-Sppi antibonding and largely sulfur in character. The calculations indicate the electronic structure of 1 is not altered markedly by H-bond donation to the S center, but protonation results in a reorganization of the electronic structure of 1H(+)() and a HOMO that is largely metal in character. The reduction of Fe-S distances upon protonation of 1(R = Ph) to give 1(R = Ph)H(+)() small middle dotBF(4)()(-)() (2.282(2) and 2.258(2) A, respectively), as determined by single-crystal X-ray crystallography, also indicates diminished Fedpi-Sppi antibonding. Using the carbonyl stretching frequencies as a gauge of the donor ability of the thiolate ligand, we conclude that H-bonding has a continuous effect on the donor properties of the thiolate ligand of 1 (i.e., is a function of the pK(a) of the H-bond donor). A discontinuous effect results when the pK(b) of 1 is reached and the complex is protonated. For our study of 1, the maximal effect of H-bonding is about 30% of protonation. Because the position of acid-base equilibrium depends on the relative basicities of the thiolate ligand and the conjugate base of the H-bond donor (and the relative heats of solvation of the acids and their conjugate bases), a true continuum of effects can be anticipated only for systems that are pK-matched in their given environments. Thus, when the conjugate base of the H-bond donor is a stronger base than the thiolate ligand (as in the present case), H-bond donation has a relatively small effect, but protonation triggers a large, discontinuous effect on the electronic structure of 1.     

Loss of hydrogen upon exposure of thiol to gold clusters at low temperature

Gold-acetone-dodecanethiol and gold-acetone-phenylethanethiol colloids were prepared by the solvated metal atom dispersion method. Hydrogen evolution occurred at fairly low temperature, when the melting acetone-gold solvate encountered the thiol molecules, due to S-H bond scission. The gas inside the reactor was analyzed by gas chromatography, and the moles of H(2) was determined by calibration curves obtained from a series of known concentration samples. The gold-to-thiolate ratio was calculated using thermal gravimetric analysis. The average particle diameter was also calculated using the gold-to-thiolate ratio.     

Absolute configuration retention of a configurationally labile ligand during dynamic processes of thiolate protected gold clusters

Monolayer protected metal clusters are dynamic nanoscale objects. For example, the chiral Au₃₈(2-PET)₂₄ cluster (2-PET: 2-phenylethylthiolate) racemizes at moderate temperature. In addition, ligands and metal atoms can easily exchange between clusters. Such processes are important for applications of monolayer protected metal clusters; however, the mechanistic study of such processes turns out to be challenging. Here we use a configurationally labile, axially chiral ligand, biphenyl-2,2′-dithiol (R/S-BiDi), as a probe to study dynamic cluster processes. It is shown that the ligand exchange of free R/S-BiDi on a chiral Au₃₈(2-PET)₂₄ cluster is diastereospecific. Using chiral chromatography, isolated single diastereomers of the type anticlockwise/clockwise-Au₃₈(2-PET)₂₂(R/S-BiDi)₁ could be isolated. Upon heating, the cluster framework racemizes, while the R/S-BiDi ligand does not. These findings demonstrate that during cluster racemization and/or ligand exchange between clusters, the R/S-BiDi ligand is sufficiently confined, thus preventing its racemization, and exclude the possibility that the ligand desorbs from the cluster surface.

The ligand exchange between a configurationally labile BiDi ligand and intrinsically chiral Au₃₈ gold nanoclusters is diastereoselective. More importantly, the adsorbed ligand retains its configuration during dynamic cluster processes.     

Complexes of DNA bases and Watson-Crick base pairs with small neutral gold clusters

The nature of the DNA-gold interaction determines and differentiates the affinity of the nucleobases (adenine, thymine, guanine, and cytosine) to gold. Our preliminary computational study [Kryachko, E. S.; Remacle, F. Nano Lett. 2005, 5, 735] demonstrates that two major bonding factors govern this interaction: the anchoring, either of the Au-N or Au-O type, and the nonconventional N-H...Au hydrogen bonding. In this paper, we offer insight into the nature of nucleobase-gold interactions and provide a detailed characterization of their different facets, i.e., geometrical, energetic, and spectroscopic aspects; the gold cluster size and gold coordination effects; proton affinity; and deprotonation energy. We then investigate how the Watson-Crick DNA pairing patterns are modulated by the nucleobase-gold interaction. We do so in terms of the proton affinities and deprotonation energies of those proton acceptors and proton donors which are involved in the interbase hydrogen bondings. A variety of properties of the most stable Watson-Crick [A x T]-Au3 and [G x C]-Au3 hybridized complexes are described and compared with the isolated Watson-Crick A x T and G x C ones. It is shown that enlarging the gold cluster size to Au6 results in a rather short gold-gold bond in the Watson-Crick interbase region of the [G x C]-Au6 complex that bridges the G x C pair and thus leads to a significant strengthening of G x C pairing.     

A study of the reactions of molecular hydrogen with small gold clusters

This work presents a study of reactions between neutral and negatively charged Au(n) clusters (n=2,3) and molecular hydrogen. The binding energies of the first and second hydrogen molecule to the gold clusters were determined using density functional theory (DFT), second order perturbation theory (MP2) and coupled cluster (CCSD(T)) methods. It is found that molecular hydrogen easily binds to neutral Au(2) and Au(3) clusters with binding energies of 0.55 eV and 0.71 eV, respectively. The barriers to H(2) dissociation on these clusters with respect to Au(n)H(2) complexes are 1.10 eV and 0.59 eV for n=2 and 3. Although negatively charged Au(n) (-) clusters do not bind molecular hydrogen, H(2) dissociation can occur with energy barriers of 0.93 eV for Au(2) (-) and 1.39 eV for Au(3) (-). The energies of the Au(2)H(2) (-) and Au(3)H(2) (-) complexes with dissociated hydrogen molecules are lower than the energies of Au(2) (-)+H(2) and Au(3) (-)+H(2) by 0.49 eV and 0.96 eV, respectively. There is satisfactory agreement between the DFT and CCSD(T) results for binding energies, but the agreement is not as good for barrier heights.     

Density functional investigation of the interaction of acetone with small gold clusters

The structural evolution of Au(n) (n=2, 3, 5, 7, 9, and 13) clusters and the adsorption of organic molecules such as acetone, acetaldehyde, and diethyl ketone on these clusters are studied using a density functional method. The detailed study of the adsorption of acetone on the Au(n) clusters reveals two main points. (1) The acetone molecule interacts with one gold atom of the gold clusters via the carbonyl oxygen. (2) This interaction is mediated through back donation mainly from the spd-hybridized orbitals of the interacting gold atom to the oxygen atom of the acetone molecule. In addition, a hydrogen bond is observed between a hydrogen atom of the methyl group and another gold atom (not involved in the bonding with carbonyl oxygen). Interestingly, the authors notice that the geometries of Au(9) and Au(13) undergo a significant flattening due to the adsorption of an acetone molecule. They have also investigated the role of the alkyl chain attached to the carbonyl group in the adsorption process by analyzing the interaction of Au(13) with acetaldehyde and diethyl ketone.     

EELS investigation of small gold clusters on mica substrates

Gold clusters with diameters from 2 to 10 nm are prepared by evaporation on mica substrates. They are investigated with low energy electron loss spectroscopy in the reflected beam and characterised in a transmission electron microscope. The energy loss spectra show a broadening of the plasma peak with decreasing particle size. The plasma frequency shifts to higher energies. The size dependence of the half width and of the plasma frequency is compared to known models. The results support the quantum box model of Genzel et al.     

Study of small benzene clusters by pulse molecular beam mass spectrometry

A simple method for separating contributions of different-sized clusters formed in a pulse supersonic boum to a mass-spectral signal has been suggested. The method is based on the analysis of time pulse profiles measured for different ions of the beam and makes it possible to calculate mass spectra of small clusters. The electron impact mass spectrum of the benzene dimer has been obtained and analyzed in We framework of the concept of intracluster ion-molecular chemistry.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1726–1732, July, 1996.     

Structural,electronic and magnetic properties of small gold clusters with a copper impurity

A set of all-electron scalar relativistic calculations on Au _n Cu (n = 1–12) clusters has been performed using density functional theory with the generalized gradient approximation at PW91 level. The lowest energy geometries of Au _n Cu clusters may be considered as assemblies of triangular Au₃ moieties substituted with one Cu atom at the highest coordinated site. All these lowest energy geometries of the Au _n Cu clusters are slightly distorted but retain the planar structures of the Au _n+1 clusters due to the strong scalar relativistic effects. The Au–Cu bonds are stronger, and a few Au–Au bonds far from the Cu atom are weaker, than the corresponding Au–Au bonds in pure Au _n+1 clusters. After doping with a Cu atom, the thermodynamic stability and chemical reactivity are enhanced to some extent. The odd-numbered Au _n Cu clusters with even numbers of valence electrons are more stable than the neighboring even-numbered Au _n Cu clusters with odd numbers of valence electrons. Odd–even alternations of magnetic moments and electronic configurations for the Au _n Cu clusters can be observed clearly and may be understood in terms of the electron pairing effect.     

Structure-directing influence of halide in mercury thiolate clusters

Under identical conditions, the reaction of 2-aminoethanethiol hydrochloride with HgX(2) (X = Cl and Br) in water yielded discrete hexanuclear [Hg(6)Cl(8)(SCH(2)CH(2)NH(3))(8))]Cl(4).4H(2)O (1) and nonanuclear [Hg(9)Br(15)(SCH(2)CH(2)NH(3))(9)](Cl(0.8)Br(0.2))(3) (2) complexes with unusual coordination environments. Compound 1 crystallizes as triclinic with a = 9.434(2) Angstroms, b = 10.999(2) Angstroms, c = 13.675(7) Angstroms, alpha = 92.9(7) degrees, beta = 105.2(7) degrees, and gamma = 96.9(7) degrees, whereas 2 is monoclinic with a = 14.162(3) Angstroms, b = 8.009(16) Angstroms, c = 19.604(4) Angstroms, alpha = gamma = 90.0 degrees, and beta = 92.7(3) degrees. In both cases, it is observed that the halide creates the secondary structure around trinuclear units (dimer in 1 and trimer in 2) through Hg-X bonding. Two independent types of Hg atoms (four- and five-coordinate in 1) and (three- and four-coordinate in 2) are observed. The geometry around Hg is quite variable with bridging thiolate and both bridging and terminal halides. The angles around Hg associated with the S atoms are more obtuse than expected from mercury(II) thiolates with a coordination number of more than 2. Intermolecular hydrogen bonding involving NH(3)(+), water molecules, and the halide atoms is responsible for the three-dimensional network in both compounds. Relatively short Hg...Hg interactions in 1 (3.797 and 3.776 Angstroms) and in 2 (3.605 and 3.750 Angstroms) are also observed. The compounds have been characterized with the help of (1)H and (13)C NMR, UV-Vis, infrared, Raman, and mass spectrometry, thermogravimetric analysis, and single X-ray crystallography.     

Synthesis and study of hexanuclear molybdenum clusters containing thiolate ligands

Four hexanuclear molybdenum chloride cluster complexes containing terminal thiolate ligands have been synthesized and fully characterized. (Bu 4N) 2[Mo 6Cl 8(SEt) 6] was prepared by reacting Na 2[Mo 6Cl 8(OMe) 6] with an excess of ethanethiol in refluxing tetrahydrofuran. (PPN) 2[Mo 6Cl 8(SBu) 6], (Bu 4N) 2[Mo 6Cl 8(SBn) 6], and (Bu 4N) 2[Mo 6Cl 8(SNC 8H 6) 6] (C 8H 6NS (-) = 3-indolylthiolate) were subsequently prepared in the reaction of [Mo 6Cl 8(SEt) 6] (2-) with an excess of HSR (R = Bu, Bn or 3-indolyl). Single crystal X-ray diffraction analyses were performed on two of these complexes: (PPN) 2[Mo 6Cl 8(SEt) 6].Et 2O, crystallizes in the triclinic space group P1 with a = 12.3894(11), b = 13.7651(12), c = 15.0974(13), alpha = 103.975(2), beta = 99.690(2), gamma = 98.062(2), and Z = 1; (PPh 3Me) 2[Mo 6Cl 8(SBn) 6].2NO 2CH 3, also crystallizes in the P1 space group with a = 12.1574(16), b = 13.4441(17), c = 14.2132(18), alpha = 89.654(2), beta = 88.365(2), gamma = 71.179(2), and Z = 1. Our studies demonstrate that [Mo 6Cl 8(SEt) 6] (2-) displays luminescent properties and that the same complex undergoes substitution reactions with different thiols, as well as reaction with electrophilic reagents such as MeI.     

In situ synthesis of nickel tiara-like clusters with two different thiolate bridges

Four nickel clusters, cyclo-[{Ni(μ-S(i)Pr)(μ-SMe)}(6)] (1), cyclo-[{Ni(μ-StBu)(μ-SMe)}(6)] (2), cyclo-[{Ni(μ-S(i)Pr)(μ-SEt)}(6)] (3) and cyclo-[{Ni(μ-StBu)(μ-SEt)}(10)] (4), based on thiolate ligands have been successfully synthesized and characterized by elemental analysis, FT-IR spectra, UV-vis-NIR spectra, powder X-ray diffraction and single-crystal X-ray diffraction. Intriguingly, the SMe and SEt ligands are generated from solvothermal in situ ligand synthesis through the cleavage of the S-S bond respectively. The four nickel thiolate clusters exhibit tiara-like frameworks consisting of two different types of thiolate ligands.     

The adsorptions of silver-doped small gold clusters toward carbon monoxide molecule

An all-electron scalar relativistic calculation on Au _n AgCO (n = 1–12) clusters has been performed using density functional theory with the generalized gradient approximation at PW91 level. The introduction of impurity silver weakens the adsorption, and, however, promotes the reactivity enhancement of CO molecule. The CO molecule is relatively more favorable to be adsorbed by the odd-numbered Au _n Ag clusters with closed-shell electronic structure. The values of chemical hardness indicate that the Au _n AgCO cluster is less stable than the corresponding Au _n+1CO cluster chemically. This picture of the influence of impurity silver on the adsorption behavior of Au _n Ag (n = 1–12) clusters toward CO molecule is consistent with previous experimental work (Haeck et al. in J Phys Chem A 115:2103, 2011), in which the cluster’s reaction probability toward CO molecule is reduced upon substitution of gold atoms for silver and the clusters with closed electronic shell are the most reactive toward CO molecule.     

Size and purity of gold nanoparticles changes with different types of thiolate ligands

Gold nanoparticles (Au-NPs) were prepared by a surfactant-free single-phase reduction of hydrogen tetrachloroaurate(III) hydrate in the presence of different organic thiol ligands. Sizes, size distributions, and crystallinity of the Au-NPs were determined by high-resolution transmission electron microscopy and powder X-ray diffraction, whereas thermogravimetric analysis provided information on the organic ligand-to-gold ratios as well as amounts of contaminants. A systematic decrease in size with increasing conical bulk of the thiolate ligand is observed but large size distributions and contamination of the generated Au-NPs prohibit detailed mechanistic studies. A first-generation Fréchet dendron thiol produced the smallest and cleanest Au-NPs of the narrowest size distribution.