Peptide Formation by Aminolysis of 1-Thio-β-D-glucopyranosyl Esters of N-Acylaminoacids

Abstract

The susceptibility of the fully acetylated 1-thio–β-D-glucopyranosyl esters of N-protected amino acids toward the amino group of an external amino acid-or peptide-ester was examined in dichloromethane at room temperature and at 40°, respectively. In each case, the aminolysis reaction led to rupture of the C-1 thiolester bond and formation of the corresponding N-acylpeptide ester; the reaction proceeded without racemization of the aglycon chiral centre. Evidence for a remarkably high acylating efficiency of the sugar—amino acid C-1 thiolester bond is presented.     

Isoaurostatin: total synthesis and structural revision

Isoaurostatin, a topoisomerase I inhibitor isolated from Thermomonospora alba has been synthesized for the first time from 2,4-dihydroxyacetophenone via 6-methoxybenzo-2(3H)-furanone in five steps. The E-isomer was converted into Z-isomer, but spectroscopic data of either of these two isomers did not match with those of the natural product. The structure of isoaurostatin has been revised to a known isoflavone, daidzein (2), based on careful analysis of spectroscopic data.     

An efficient approach for total synthesis of aminopropyl functionalized ganglioside GM1b

A highly efficient protocol for the synthesis of aminopropyl functionalized ganglioside GM1b has been described. The full protected ganglioside GM1b was obtained in 71% yield within 5 h. The key feature of the synthetic approach was the use of sialic acid donor that was with a C-5 trichloroacetamide moiety and with a dibenzyl phosphite residue as leaving group at the anomeric carbon. The sialyl donor gave high yields and excellent α-anomeric selectivities with a wide variety of glycosyl acceptors ranging from C-3 or C-6 hydroxyls of galactoside to C-6 hydroxyl of glucosaminoside by using TMSOTf as catalyst in a mixture solution of acetonitrile and methylene chloride.     

Vanchrobactin: absolute configuration and total synthesis

The stereochemistry of vanchrobactin, a siderophore produced by the bacterial fish pathogenVibrio anguillarum serotype O2, was elucidated by chiral capillary electrophoresis analysis and total synthesis as N-[N′-(2,3-dihydroxybenzoyl)-d-arginyl]-l-serine.     

Glycosylated tris-bipyridine ferrous complexes for probing a mechanism behind carbohydrate-carbohydrate interactions: Spatial carbohydrate packing of glycoclusters changes on additions of salts in carbohydrate- and anion-dependent manners

2,2′-Bipyridines containing two β-maltoside, β-lactoside, or β-isomaltoside appendages were prepared and successively complexed with ferrous ion to afford hexavalent glycoclusters having tris-bipyridine ferrous complex cores. Each of these metalloglycoclusters showed unique UV–vis and CD spectral changes upon addition of chloride, nitrate, and sulfate salts in carbohydrate- and anion-dependent manners. The results indicate that spatial carbohydrate packing of the metalloglycoclusters changes upon addition of these anions and that different anions stabilize different carbohydrate packings. Furthermore, the sulfates specifically enhance the rheological properties of aqueous solutions containing the metalloglycocluster containing β-lactoside appendages.     

The first total synthesis of trichostatin D

Trichostatin D and 6-epi-trichostatin D have been stereoselectively synthesized through a remote stereoinduction with a chiral vinylketene silyl N,O-acetal and glycosylation of hydroxyimide under Mitsunobu conditions.     

Efficient stereoselective synthesis of oligosaccharides of Streptococcus pneumoniae serotypes 6A and 6B containing multiple 1,2-cis glycosidic linkages

The synthesis of the repeating units of pneumococcal polysaccharide serotypes 6A and 6B and derivatives thereof is described. Application of S-benzoxazolyl and S-thiazolinyl glycosides allowed rapid oligosaccharide assembly and provided complete stereoselectivity in challenging 1,2-cis glucosylations and galactosylations. The oligosaccharide assembly was accomplished in an efficient manner by selective activation of thioimidoyl leaving groups over thioglycosides.     

The first total synthesis of (±)-4-methoxydecanoic acid: a novel antifungal fatty acid

The hitherto unknown (±)-4-methoxydecanoic acid was synthesized in six steps and in 25% overall yield starting from commercially available 4-penten-1-ol. The title compound demonstrated 17-fold higher antifungal activity (MIC = 1.5 mM) against Candida albicans ATCC 60193 and Cryptococcus neoformans ATCC 66031 when compared to unsubstituted n-decanoic acid. Our results demonstrate that mid-chain methoxylation appears to be a viable strategy for increasing the fungitoxicity of fatty acids.     

Study on the synthesis of novel fluorescent macrocyclic sensors and their sensitive properties for Cu2+ and Fe3+ in aqueous solution

In this work, we synthesised and characterised three novel fluorescence macrocyclic sensors containing optically active dansyl groups. The studies for the interaction of the synthesised compounds with various mental ions (Li⁺, Na⁺, K⁺, Ag⁺, Mg²⁺, Ca²⁺, Ba²⁺, Pb²⁺, Zn²⁺, Co²⁺, Cd²⁺, Hg²⁺, Ni²⁺, Cu²⁺, Mn²⁺, Cr³⁺, Al³⁺, Fe³⁺) were performed by fluorescence titration, Job’s plot, ESI-MS and DFT calculations. The results showed that the sensors 1a–1c displayed selective recognition for Cu²⁺ and Fe³⁺ ions and formed stoichiometry 1:1 complex through PET mechanism in DMSO/H₂O solution (1:1, v/v, pH 7.4 of HEPES). The binding constant (K) and detection limit were calculated.     

A low-temperature route for the synthesis of nanocrystalline LaB6

Nanocrystalline lanthanum hexaboride (LaB₆) with mean particle size of 30 nm has been successfully synthesized at 400 °C in an autoclave starting from metallic magnesium powder, NaBH₄ and LaCl₃. In this case, by using B₂O₃ instead of NaBH₄, LaB₆ nanocubes with mean size of ∼200 nm were formed at 500 °C. The X-ray diffraction (XRD) pattern can be indexed as cubic LaB₆ with the lattice constant of a=4.151 Å for LaB₆ nanoparticles and 4.154 Å for LaB₆ nanocubes. An atomic ratio of La and B as 1:5.94 was determined from EDS for LaB₆ nanoparticles. XPS data of LaB₆ nanocubes indicate the atomic ratio of La to B as 1:5.95. Raman spectra indicate the formation of LaB₆.     

Synthesis of the Lewis b pentasaccharide and a HSA-conjugate thereof

Helicobacter pylori, a gastric pathogen, binds to various blood group antigens, including the Lewis types, present in the gastric tissue and a relation between the presentation of the ligands and the overall strength of binding has been assumed. Synthetic Lewis b tetra- and hexasaccharide conjugates are available but not the analogous pentasaccharide. An efficient synthesis of the amino spacer equipped Lewis b pentasaccharide, 3-aminopropyl α-l-fucopyranosyl-(1→2)-β-d-galactopyranosyl-(1→3)-[α-l-fucopyranosyl-(1→4)]-2-acetamido-2-deoxy-β-d-glucopyranosyl-(1→3)-β-d-galactopyranoside, is presented to enable further investigation of the carbohydrate recognition process of H. pylori.     

Thiazole-based chemosensor: synthesis and ratiometric fluorescence sensing of zinc

A new ratiometric and selective fluorescent chemosensor (1), based on thiazole for quantification of zinc ions in aqueous ethanol, was synthesized and investigated. The mechanism of fluorescence was based on the cation-induced inhibition of excited-state intramolecular proton transfer (ESIPT).     

Study of Complex Formation Between Dicyclohexano-18-Crown-6 (DCH18C6) with Mg 2+, Ca2+, Sr 2+, and Ba2+ Cations in Methanol–Water Binary Mixtures Using Conductometric Method

The complexation reactions between Mg²⁺,Ca²⁺,Sr²⁺ and Ba²⁺ metal cations with macrocyclic ligand, dicyclohexano-18-crown-6 (DCH18C6) were studied in methanol (MeOH)–water (H₂O) binary mixtures at different temperatures using conductometric method . In all cases, DCH18C6 forms 1:1 complexes with these metal cations. The values of stability constants of complexes which were obtained from conductometric data show that the stability of complexes is affected by the nature and composition of the mixed solvents. While the variation of stability constants of DCH18C6-Sr ²⁺ and DCH18C6-Ba²⁺versus the composition of MeOH–H₂O mixed solvents is monotonic, an anomalous behavior was observed for variations of stability constants of DCH18C6-Mg²⁺ and DCH18C6-Ca²⁺ versus the composition of the mixed solvents. The values of thermodynamic parameters (ΔH_c°, ΔS_c°) for complexation reactions were obtained from temperature dependence of formation constants of complexes using the van’t Hoff plots. The results show that in most cases, the complexation reactions are enthalpy stabilized but entropy destabilized and the values of thermodynamic parameters are influenced by the nature and composition of the mixed solvents. The obtained results show that the order of selectivity of DCH18C6 ligand for metal cations in different concentrations of methanol in MeOH–H₂O binary system is: Ba²⁺>Sr²⁺>Ca²⁺> Mg²⁺.     

Tb3＋离子与植物辣根过氧化物酶的作用方式探讨

利用紫外可见吸收光谱、红外光谱、荧光光谱、原子吸收及酶分离方法, 首次研究了稀土离子Tb^3＋与植物辣根过氧化物酶(HRP)的相互作用方式. 结果表明, Tb^3＋与HRP作用方式包括: (1) Tb^3＋与肽链上的氨基酸残基作用, 影响酶活性中心的微结构; (2) Tb^3＋能部分取代酶中的Ca^2＋; (3) Tb^3＋能部分剪切肽链上的氨基酸残基, 改变酶的结构. 因此, Tb^3＋与HRP的相互作用可能以一种方式为主, 或几种作用方式同时存在.     

First stereoselective total synthesis of triumfettamide

The first total synthesis of triumfettamide (1) is described. The asymmetric syntheses of two highly functionalized units—α-hydroxylated C17 monounsaturated fatty acid unit (2) and C26 phytosphingosine (3) have been accomplished involving Sharpless asymmetric dihydroxylation, Sharpless kinetic resolution, regioselective epoxide opening, regioselective DIBAL-H reduction of acetal, Wittig olefination as the key steps. Finally N-acylation of phytosphingosine 3 with (2R,6Z)-2-hydroxy-6-heptadecenoic acid 2 followed by DDQ deprotection of PMB, provided target compound 1.     

A short synthesis of morachalcone A

Advanced C-prenylated intermediates for three aromatase inhibitors, including morachalcone A, can be synthesized through a Claisen-Schmidt condensation followed by Florisil^®-catalyzed [1,3]-sigmatropic rearrangement of a prenyl phenyl ether.     

(Oligo)thienyl-imidazo-benzocrown ether derivatives: synthesis, photophysical studies and evaluation of their chemosensory properties

A series of novel (oligo)thienyl-imidazo-benzocrown ethers were synthesised through a simple method and evaluated as fluorimetric chemosensors for transition metal cations. Interaction with Ni²⁺, Pd²⁺, and Hg²⁺ in ACN/DMSO solution (99:1) was studied by absorption and emission spectroscopy. Chemoselectivity studies in the presence of Na⁺ were also carried out and a fluorescence enhancement upon chelation (CHEF) effect was observed following Hg²⁺ complexation. Considering that most systems using fluorescence spectroscopy for detecting Hg²⁺ are based on the complexation enhancement of the fluorescence quenching (CHEQ) effect, the present work represents one of the few examples for sensing of Hg²⁺ based on a CHEF effect.     

Total synthesis of a tetra- and two pentasaccharide fragments of the O-specific polysaccharide of Shigella flexneri serotype 2a

The synthesis of the methyl glycoside of the branched pentasaccharide biological repeating unit of the O-antigen of Shigella flexneri serotype 2a is described together with that of the methyl glycoside of the corresponding tetrasaccharide and frame-shifted linear pentasaccharide. All the strategies disclosed herein involve a key disaccharide corresponding to the branching point and otherwise appropriate monosaccharide building blocks activated as their trichloroacetimidate. Our data suggest partial lack of conformational flexibility at the branched residue.     

Highly efficient total synthesis of Δ-PGJ2, 15-deoxy-Δ-PGJ2, and their analogues

Palladium-catalyzed reaction of TBS ether of 4-cyclopentene-1,3-diol monoacetate (>95% ee) with an anion derived from methyl malonate and a base such as t-BuOK and LDA proceeded highly efficiently and reproducibly. The product obtained in >90% isolated yield was transformed in five steps into the key cyclopentenone possessing the α-chain at the γ position. Aldol reaction of this enone with the ω-chain aldehyde afforded the aldol adduct, and exposure of the derived mesylate to Al₂O₃ furnished the cross-conjugated dienone of the full structure. Finally, functional group manipulation furnished Δ¹²-PGJ₂ efficiently. Similarly, 15-deoxy-Δ^12,14-PGJ₂, 5,6-acetylene analogues, and a 5,6-dihydro analogue were synthesized.     

A kinetic study of the oxidation of hydroxamic acids by compounds I and II of horseradish peroxidase: Effect of transition metal ions

Abstract

Oxidation of hydroxamic acids (HXs) generates HNO, and it is not clear whether it is formed also in the presence of metal ions. The kinetics of the oxidation of HXs, such as acetohydroxamic acid, suberohydroxamic acid, and suberoylanilide hydroxamic acid (SAHA), by compounds I and II of horseradish peroxidase (HRP) at pH 7.0 and 25?°C have been studied using rapid-mixing stopped-flow. The kinetics of these reactions were compared to those observed in the presence of Cu(ClO₄)₂, NiSO₄, or ZnSO₄. The rates decrease upon increasing [Cu^II] at constant [HXs], and no oxidation of HX occurs when [HX]/[Cu^II] ≈ 2, implying that HX oxidation in the presence of Cu^II proceeds through the free ligand since the predominant complex is CuX₂. In the case of Ni^II, the oxidation rate decreases upon increasing the ratio [Ni^II]/[HX] beyond 1, where the predominant complex is Ni^IIX⁺, implying that its oxidation is feasible. The effect of Zn^II could be studied only on the rate of HXs oxidation by compound II demonstrating similar behavior to that of Ni^II. HXs were also oxidized catalytically by HRP/H₂O₂ at pH 7.0, demonstrating that metal ions facilitate the formation of HNO while hardly affecting its yield and the extent of HX oxidation.