Modulational instability and exact soliton solutions for a twist-opening model of DNA dynamics

We study the nonlinear dynamics of DNA which takes into account the twist-opening interactions due to the helicoidal molecular geometry. The small amplitude dynamics of the model is shown to be governed by a solution of a set of coupled nonlinear Schrödinger equations. We analyze the modulational instability and solitary wave solution in the case. On the basis of this system, we present the condition for modulation instability occurrence and attention is paid to the impact of the backbone elastic constant K. It is shown that high values of K extend the instability region. Through the Jacobian elliptic function method, we derive a set of exact solutions of the twist-opening model of DNA. These solutions include, Jacobian periodic solution as well as kink and kink-bubble solitons.     

Quasilinear theory for the nonlinear Schrödinger equation with periodic coefficients

The nonlinear Schrödinger equation with periodic coefficients is analyzed under the condition of large variation in the local dispersion. The solution after n periods is represented as the sum of the solution to the linear part of the nonlinear Schrödinger equation and the nonlinear first-period correction multiplied by the number of periods n. An algorithm for calculating the quasilinear solution with arbitrary initial conditions is proposed. The nonlinear correction to the solution for a sequence of Gaussian pulses is obtained in the explicit form.     

Integrable discrete static Hamiltonian with a parametric double-well potential

A one-dimensional discrete conservative Hamiltonian with a generalized form of the Schmidt potential, is constructed with the help of a non-integrable discrete Hamiltonian whose parametrized double-well potential can be reduced to the ?⁴ potential. The new conservative Hamiltonian is completely integrable in the discrete static regime, and the associate exact nonlinear solution is shown to coincide with the continuum nonlinear periodic solution of the non-integrable Hamiltonian. Numerical simulations and nonlinear stability analysis suggest that the discrete mapping derived from the completely integrable Hamiltonian undergoes a bifurcation which does not leads to the chaotic phase with randomly pinned states, but instead to a phase where real solutions become rare forming a cluster of periodic points around an elliptic fixed point.     

Qualitative analysis and traveling wave solutions for the perturbed nonlinear Schrödinger's equation with Kerr law nonlinearity

In this Letter, we investigate the perturbed nonlinear Schrödinger's equation (NLSE) with Kerr law nonlinearity. All explicit expressions of the bounded traveling wave solutions for the equation are obtained by using the bifurcation method and qualitative theory of dynamical systems. These solutions contain bell-shaped solitary wave solutions, kink-shaped solitary wave solutions and Jacobi elliptic function periodic solutions. Moreover, we point out the region which these periodic wave solutions lie in. We present the relation between the bounded traveling wave solution and the energy level h. We find that these periodic wave solutions tend to the corresponding solitary wave solutions as h increases or decreases. Finally, for some special selections of the energy level h, it is shown that the exact periodic solutions evolute into solitary wave solution.     

Relativistic Point Dynamics and Einstein Formula as a Property of Localized Solutions of a Nonlinear Klein-Gordon Equation

Einstein’s relation E = Mc ² between the energy E and the mass M is the cornerstone of the relativity theory. This relation is often derived in a context of the relativistic theory for closed systems which do not accelerate. By contrast, the Newtonian approach to the mass is based on an accelerated motion. We study here a particular neoclassical field model of a particle governed by a nonlinear Klein-Gordon (KG) field equation. We prove that if a solution to the nonlinear KG equation and its energy density concentrate at a trajectory, then this trajectory and the energy must satisfy the relativistic version of Newton’s law with the mass satisfying Einstein’s relation. Therefore the internal energy of a localized wave affects its acceleration in an external field as the inertial mass does in Newtonian mechanics. We demonstrate that the “concentration” assumptions hold for a wide class of rectilinear accelerating motions.     

Nonlinear waves in elastic media

We ask about the possible existence of solitary waves in infinite, homogeneous, isotropic, elastic media. Namely, can a nonlinear localized wave packet propagate without altering its shape in such materials? We consider one- dimensional propagation both of body and surface waves. In the first case we show, under rather general assumptions, that if a wave packet propagates without altering its shape it must, of necessity, be a solution of a linear wave equation and in this sense, (body) solitary waves do not exist. Surface solitary waves may however exist: a model equation is derived in which nonlinear and dispersive effects balance each other to allow for waves-both periodic and solitary-of constant shape. It is conceivable they are of some relevance in seismology.     

Exact solutions of semiclassical non-characteristic Cauchy problems for the sine-Gordon equation

The use of the sine-Gordon equation as a model of magnetic flux propagation in Josephson junctions motivates studying the initial-value problem for this equation in the semiclassical limit in which the dispersion parameter ε tends to zero. Assuming natural initial data having the profile of a moving −2π kink at time zero, we analytically calculate the scattering data of this completely integrable Cauchy problem for all ε>0 sufficiently small, and further we invert the scattering transform to calculate the solution for a sequence of arbitrarily small ε. This sequence of exact solutions is analogous to that of the well-known N-soliton (or higher-order soliton) solutions of the focusing nonlinear Schrödinger equation. We then use plots obtained from a careful numerical implementation of the inverse-scattering algorithm for reflectionless potentials to study the asymptotic behavior of solutions in the semiclassical limit. In the limit ε↓0 one observes the appearance of nonlinear caustics, i.e. curves in space-time that are independent of ε but vary with the initial data and that separate regions in which the solution is expected to have different numbers of nonlinear phases.In the appendices, we give a self-contained account of the Cauchy problem from the perspectives of both inverse scattering and classical analysis (Picard iteration). Specifically, Appendix A contains a complete formulation of the inverse-scattering method for generic L¹-Sobolev initial data, and Appendix B establishes the well-posedness for L^p-Sobolev initial data (which in particular completely justifies the inverse-scattering analysis in Appendix A).     

Justification of the Lattice Equation for a Nonlinear Elliptic Problem with a Periodic Potential

We justify the use of the lattice equation (the discrete nonlinear Schrödinger equation) for the tight-binding approximation of stationary localized solutions in the context of a continuous nonlinear elliptic problem with a periodic potential. We rely on properties of the Floquet band-gap spectrum and the Fourier–Bloch decomposition for a linear Schrödinger operator with a periodic potential. Solutions of the nonlinear elliptic problem are represented in terms of Wannier functions and the problem is reduced, using elliptic theory, to a set of nonlinear algebraic equations solvable with the Implicit Function Theorem. Our analysis is developed for a class of piecewise-constant periodic potentials with disjoint spectral bands, which reduce, in a singular limit, to a periodic sequence of infinite walls of a non-zero width. The discrete nonlinear Schrödinger equation is applied to classify localized solutions of the Gross–Pitaevskii equation with a periodic potential.     

The exact rogue wave recurrence in the NLS periodic setting via matched asymptotic expansions,for 1 and 2 unstable modes

The focusing Nonlinear Schrödinger (NLS) equation is the simplest universal model describing the modulation instability (MI) of quasi monochromatic waves in weakly nonlinear media, the main physical mechanism for the generation of rogue (anomalous) waves (RWs) in Nature. In this paper we investigate the x-periodic Cauchy problem for NLS for a generic periodic initial perturbation of the unstable constant background solution, in the case of $N=1,2$ unstable modes. We use matched asymptotic expansion techniques to show that the solution of this problem describes an exact deterministic alternate recurrence of linear and nonlinear stages of MI, and that the nonlinear RW stages are described by the N-breather solution of Akhmediev type, whose parameters, different at each RW appearance, are always given in terms of the initial data through elementary functions. This paper is motivated by a preceding work of the authors in which a different approach, the finite gap method, was used to investigate periodic Cauchy problems giving rise to RW recurrence.     

Dynamic critical phenomena in two-dimensional fully frustrated Coulomb gas model with disorder

The dynamic critical phenomena near depinning transition in two-dimensional fully frustrated square lattice Coulomb gas model with disorders was studied using Monte Carlo technique. The ground state of the model system with disorder σ=0.3 is a disordered state. The dependence of charge current density J on electric field E was investigated at low temperatures. The nonlinear J-E behavior near critical depinning field can be described by a scaling function proposed for three-dimensional flux line system [M.B. Luo, X. Hu, Phys. Rev. Lett. 98 (2007) 267002]. We evaluated critical exponents and found an Arrhenius creep motion for field region Ec/2<E<Ec. The scaling law of the depinning transition is also obtained from the scaling function.     

Analytical solution for the field in photonic structures containing cubic nonlinearity

In this work, we consider the exact solution of the stationary cubic nonlinear equation in a semi-infinite nonlinear medium in contact with a one-dimensional photonic crystal. Two kinds of analytical solutions are found for an arbitrary magnitude of the nonlinearity: a standing-wave-like one containing the inverse elliptic function Eli(?∣m), and a one-wave-type solution for transmitted TE-polarized waves. An approximate two-wave solution is proposed to describe the field propagation through the nonlinear film covering the photonic crystal. It is shown that the problem of a mixed linear-nonlinear structure may be reduced to a transcendental kernel equation determining the field inside the nonlinear part of the medium. The light reflection from a Si/SiO₂ layered structure in contact with an optically nonlinear medium is calculated. The angular-frequency photonic band diagram and power dependency are investigated. Local interface waveguide modes are considered.     

New Integrable and Linearizable Nonlinear Difference Equations

A systematic investigation to derive nonlinear lattice equations governed by partial difference equations (PΔΔE) admitting specific Lax representation is presented. Further it is shown that for a specific value of the parameter the derived nonlinear PΔΔE's can be transformed into a linear PΔΔE's under a global transformation. Also it is demonstrated how to derive higher order ordinary difference equations (OΔE) or mappings in general and linearizable ones in particular from the obtained nonlinear PΔΔE's through periodic reduction. The question of measure preserving property of the obtained OΔE's and the construction of more than one integrals (or invariants) of them is examined wherever possible.     

Initial value problem of the Whitham equations for the Camassa-Holm equation

We study the Whitham equations for the Camassa-Holm equation. The equations are neither strictly hyperbolic nor genuinely nonlinear. We are interested in the initial value problem of the Whitham equations. When the initial values are given by a step function, the Whitham solution is self-similar. When the initial values are given by a smooth function, the Whitham solution exists within a cusp in the x-t plane. On the boundary of the cusp, the Whitham solution matches the Burgers solution, which exists outside the cusp.     

Dynamics of Dirac quasi-particles in lattice vibration and anomalous phonon frequency shift of graphene

By exact solution of time-dependent Schrödinger equation of electron in graphene under interaction with E_2g phonons, we investigate the dynamical behavior of Dirac quasi-particle in the process of lattice vibration. Due to the global geometric phases acquired by electron during lattice vibration, an anomalous shift of the vibration frequency is obtained. We calculate the Fermi energy dependence of frequency shift which is in consistence with experiment in case of small doping density.     

Formation of convective cells by modulational instability of drift Alfvén waves

A model equation describing drift Alfvén wave with E × B nonlinearity is derived. For a special ordering a nonlinear Schrödinger equation is derived, which governs modulational instability of the drift Alfvén wave. Translational invariance is assumed along the magnetic field. The relation between the characteristic scale lengths parallel and perpendicular to the drift flow for the onset of cell formation has been found. The influence of perpendicular ion viscosity is also discussed.     

Brownian system in energy space

The main goal of this article is to present a simple way to describe non-equilibrium systems in energy space and to obtain new spacial solution that complements recent results of B.I. Lev and A.D. Kiselev, Phys. Rev. E 82 , (2010) 031101. The novelty of this presentation is based on the kinetic equation which may be further used to describe the non-equilibrium systems, as Brownian system in the energy space. Starting with the basic kinetic equation and the Fokker-Plank equation for the distribution function of the macroscopic system in the energy space, we obtain steady states and fluctuation relations for the non-equilibrium systems. We further analyze properties of the stationary steady states and describe several nonlinear models of such systems.     

Dark optical solitons with power law nonlinearity using G′/G-expansion

This paper studies the dynamics of dark optical solitons. The G′/G-expansion approach is utilized. The byproduct of this approach is the singular periodic solution of the governing nonlinear Schrödinger's equation for its corresponding parameter regime. The constraint conditions are also in place for the existence of dark solitons.     

Well-Posedness of an Integrable Generalization of the Nonlinear Schr?dinger Equation on the Circle

It is shown that the periodic initial value problem (i.v.p.) for a novel integrable generalization of the nonlinear Schrödinger equation (igNLS) is well-posed in Sobolev spaces with exponent greater than 3/2. The proof is based on a Galerkin-type approximation method. When 1/?? is not an integer, then a mollified version of the i.v.p. is solved first by applying the fundamental ODE theorem in Banach spaces. Then, deriving appropriate energy estimates, it is shown that the family of the approximate solutions thus obtained has a convergent subsequence, which at the limit gives a solution to the igNLS equation. Finally, again using energy estimates, it is shown that this solution is unique and that the data-to-solution map is continuous. When 1/?? is an integer then well-posedness is proved for the nonlocal version of this equation in the corresponding homogeneous Sobolev spaces.