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1.
Single- and double-stranded calf thymus DNA and two polynucleotides (0.4 mM) were studied in aqueous solution at pH approximately 7 using pulsed, 20 ns laser excitation at 193 nm. Monophotonic ionization of the nucleic acids is suggested from the linear dependences of the concentration of ejected electrons and the number of single- and double-strand breaks (ssb, dsb, respectively) on laser intensity (IL) in the range (0.2-3) x 10(6) W cm-2. The quantum yields of formation of hydrated electrons (phi e-) and ssb and dsb (phi ssb and phi dsb) are therefore independent of IL. In contrast, under 248 nm excitation these quantum yields increase linearly with IL under otherwise comparable conditions. Nevertheless, several effects and mechanistic implications are analogous using lambda exc = 193 and 248 nm. For polycytidylic acid, poly(C), in Ar-saturated solution for example, the efficiency of ssb per radical cation (eta RC = phi ssb/phi e-) is similar to the efficiency of ssb per OH radical (eta OH). For polyadenylic acid, poly(A), and single- and double-stranded DNA eta RC (lambda exc = 193 nm) is significantly smaller than eta OH. The ratio phi ssb (N2O)/phi ssb (Ar) is approximately 2 for poly(C), approximately 4 for poly(A) approximately 10 for DNA; the conversion of hydrated electrons into OH radicals in N2O-saturated solution and smaller eta RC than eta OH values in the case of DNA account for these results. For double-stranded DNA phi dsb does not depend on IL but increases linearly with the dose, indicating an accumulative effect of two ssb to generate one dsb. The critical distance for this event is 60-85 phosphoric acid diester bonds.  相似文献   

2.
利用纳秒级激光光解动态吸收光谱装置,研究了1,2-和1,4-萘醌中性水溶液的瞬态吸收光谱.发现1,2-萘醌及1,4-萘醌被光电离后形成的阳离子自由基在380nm均有最大吸收,但1,4-萘醌阳离子自由基在衰变过程中又形成了两种新的活性粒子,它们的最大吸收分别位于410和580nm,分析表明:410nm属于1,4-萘醌脱氢自由基的吸收,而580nm很可能归属由于电子转移而形成的瞬态产物.进一步研究发现,1,2-萘醌在中性水溶液中能被248nm激光单光子电离.  相似文献   

3.
With the objective of developing near-infrared fluorescence probes for biological applications, a few squaraine dyes 3a-d, containing amphiphilic substituents, were synthesized and their photophysical properties have been investigated in the presence and absence of the organized media. These dyes exhibited absorption in the range 630-650 nm, with significant absorption coefficients (epsilon = 1-3 x 10(5) M(-1) cm(-1)) in the aqueous medium. The fluorescence spectra of these dyes showed emission maximum from 660 to 675 nm, depending on the nature of substituents. The fluorescence quantum yields were in the range from 0.15 to 0.21 in ethanol, but 10 times lower values were observed (phi(f) = 0.01-0.02) in the aqueous medium. In the presence of micelles such as cetyltrimethylammonium bromide, sodium dodecyl sulfate, and Triton X-100, these dyes showed negligible changes in their absorption properties, whereas a significant enhancement (5-10-folds) in their fluorescence yields was observed. Picosecond time-resolved studies indicated that these dyes show single-exponential decay in ethanol and ethanol-water mixtures; however, they exhibit biexponential decay with longer lifetimes in the presence of the micellar media. The results indicate that these novel amphiphilic squaraine dyes 3a-d, which exhibit favorable photophysical properties, good solubility in the aqueous medium, and interact efficiently with micelles, can have potential biological applications as near-infrared fluorescence sensors.  相似文献   

4.
Release of bases form calf thymus DNA and three polynucleotides, induced by 20 ns excitation at 193 nm in aqueous solution at pH 7, was detected by HPLC. The quantum yields of formation of free bases (phi B) from double-stranded DNA (0.4 mM) are independent of intensity, indicating a one-quantum mechanism of N-glycosidic bond cleavage. The phi B values increase in the order guanine, thymine, adenine, cytosine, the latter being phi C approximately 7 x 10(-4) for double-stranded DNA under Ar and O2. The larger phi B values in N2O-saturated solution, e.g., phi C = 1.2 x 10(-3), are ascribed to additional base release via OH-adduct radicals. The phi B values of homopolynucleotides increase in the order poly(G), poly(A) and poly(C), e.g. phi C = 7 x 10(-3) under Ar, as do the efficiencies for base release per radical cation (eta B). A comparison of the eta B values with the efficiencies of single-strand breakage for poly(C), poly(A) and DNA shows a similar trend; both are markedly larger for pyrimidines than for purines. Pathways to undamaged bases, initiated from base radical cations, are proposed.  相似文献   

5.
The photochemical processes of aromatic amino acids were investigated in aqueous solution using acetone as photosensitizer by KrF (248 nm) laser flash photolysis. Laser-induced transient species were characterized according to kinetic analysis and quenching experiments. The intermediates recorded were assigned to the excited triplet state of tryptophan, the radicals of tryptophan and tyrosine. The excited triplet state of tryptophan produced via a triplet-triplet excitation transfer and the radicals arising from electron transfer reaction has been identified. Neither electron transfer nor energy transfer between triplet acetone and phenylalanine can occur in photolysis of phenylalanine aqueous solution which contains acetone. Furthermore, triplet acetone-induced radical transformation: Trp/N-Tyr→Trp-Tyr/O was observed directly in photolysis of dipeptide (Trp-Tyr) aqueous solution containing acetone, and the transformation resulting from intramolecular electron transfer was suggested.  相似文献   

6.
Near-infrared dyes can be derivatized with appropriate functional groups for use as analytical probes for numerous applications. A dye derivatized with pH-sensitive functional groups may show spectral changes when the pH of its environment is changed. These dyes are valuable to the researcher since they absorb and fluoresce at long wavelengths where interference is minimal and their absorption maxima permit the use of semiconductor lasers. In this paper we have evaluated the sensitivity to pH of a bis-carboxylic acid derivative of a near infrared dye to illustrate its potential as a probe for determining pH. The dye has an absorption maximum at 795 nm in aqueous solution, a region where several commercially available laser diodes have their output maximum. The analytical utility of near-infrared laser diodes for pH determination has also been evaluated.  相似文献   

7.
Excited states of one-electron-oxidized guanine in DNA are known to induce hole transfer to the sugar moiety and on deprotonation result in neutral sugar radicals that are precursors of DNA strand breaks. This work carried out in a homogeneous aqueous glass (7.5 M LiCl) at low temperatures (77-175 K) shows the extent of photoconversion of one-electron-oxidized guanine and the associated yields of individual sugar radicals are crucially controlled by the photon energy, protonation state, and strandedness of the oligomer. In addition to sugar radical formation, highly oxidizing excited states of one-electron-oxidized guanine are produced with 405 nm light at pH 5 and below that are able to oxidize chloride ion in the surrounding solution to form Cl(2)(?-) via an excited-state hole transfer process. Among the various DNA model systems studied in this work, the maximum amount of Cl(2)(?-) is produced with ds (double-stranded) DNA, where the one-electron-oxidized guanine exists in its cation radical form (G(?+):C). Thus, via excited-state hole transfer, the dsDNA is apparently able to protect itself from cation radical excited states by transfer of damage to the surrounding environment.  相似文献   

8.
The photophysical and photochemical properties of N-phthaloyl-methionine (1), S-methyl-N-phthaloyl-cysteine methyl ester (2) and N-phthaloyltranexamic acid (3) were studied by time-resolved UV/Vis spectroscopy, using laser pulses at 248 or 308 nm. The quantum yield of fluorescence is low (phi(f)< 10(-2)) for 1-3 in fluid and glassy media, whereas that of phosphorescence is large (0.3-0.5) in ethanol at - 196 degrees C. The triplet properties were examined in several solvents, at room temperature and below. The spectra and decay kinetics are similar, but the population of the pi(pi*) triplet state, as measured by T-T absorption, is much lower for 1 and 2 than for 3 or N-methyltrimellitimide (5') at ambient temperatures. The quantum yield (phi(delta)) of singlet molecular oxygen O2(1deltag) formation is substantial for 3 and 5' in several air- or oxygen-saturated solvents at room temperature, but small for 2 and 1. The quantum yield of decomposition is substantial (0.2-0.5) for 3 and small (<0.05) for 2 and 1. It is postulated that photoinduced charge separation in the spectroscopically undetectable 3n,pi* state may account for the cyclization products of 1 and 2. In aqueous solution, this also applies for 3, whereas in organic solvents cyclization involves mainly the lower lying 3pi,(pi*) state. Triplet acetone, acetophenone and xanthone are quenched by 1-3 in acetonitrile; the rate constant is close to the diffusion-controlled limit, but smaller for benzophenone. While the energy transfer from the triplet ketone occurs for 3, a major contribution of electron transfer to the N-phthalimide derivative is suggested for 1 and 2, where the radical anion of benzophenone or 4-carboxybenzophenone is observed in alkaline aqueous solution.  相似文献   

9.
报导了利用纳秒级激光光解瞬态吸收光谱技术研究环苯丙氨酰组氨酰水溶液光解和光敏化作用过程。发现了该环肽在248nm激光的激励下产生光电离和光解离,光电离和光解离过程发生在苯丙氨酸残基上,生成具有320nm和410nm特征吸收的自由基,光解离发生具有320nm特征吸收的苄基自由基。而具有亲电子性的丙酮能在该环肽的苯丙氨酸残基的苯环上抽取电子,形成320nm和410nm的特征吸收峰,求出了自由基的有关动  相似文献   

10.
The absorption and fluorescence spectra, fluorescence quantum yields, lifetimes and time-resolved fluorescence spectra are reported for nine different fluorescent DNA-dyes. The work was initiated in search of a quantitative method to detect the ratio of single-to-double stranded DNA (ssDNA/dsDNA) in solution based on the photophysics of dye-DNA complexes; the result is a comprehensive study providing a vast amount of information for users of DNA strains. The dyes examined were the bisbenzimide or indole-derived stains (Hoechst 33342, Hoechst 33258 and 4',6-diamidino-2-phenylindole), phenanthridinium stains (ethidium bromide and propidium iodide) and cyanine dyes (PicoGreen, YOYO-1 iodide, SYBR Green I and SYBR Gold). All were evaluated under the same experimental conditions in terms of ionic strength, pH and dye-DNA ratio. Among the photophysical properties evaluated only fluorescence lifetimes for the cyanine stilbene dyes allowed a convenient differentiation between ssDNA and dsDNA. The bisbenzimide dyes showed multiexponential decays when bound to either form of DNA, making lifetime-based analysis cumbersome with inherent errors. These dyes also presented biexponential decay when free in aqueous buffered solutions at different pH. A mechanism for their deactivation is proposed based on two different conformers decaying with different kinetics. The phenanthridinium dyes showed monoexponential decays with ssDNA and dsDNA, but there was no discrimination between them. High dye-DNA ratios (e.g. 1:1) resulted in multiexponential decays for cyanine dyes, resulting from energy transfer or self-quenching deactivation. Shifts in both absorption and fluorescence maxima for both ssDNA and dsDNA DNA-cyanine dye complexes were small. Broadening of dye-ssDNA absorption and fluorescence bands for the cyanine dyes relative to dye-dsDNA bands was detected and attributed to higher degrees of rotational freedom in the former.  相似文献   

11.
The reactions of SO4.- with 2'-deoxycytidine 1a and cytidine 1b lead to very different intermediates (base radicals with 1a, sugar radicals with 1b). The present study provides spectral and kinetic data for the various intermediates by pulse radiolysis as well as information on final product yields (free cytosine). Taking these and literature data into account allows us to substantiate but also modify in essential aspects the current mechanistic concept (H. Catterall, M. J. Davies and B. C. Gilbert, J. Chem. Soc., Perkin Trans. 2, 1992, 1379). SO4.- radicals have been generated radiolytically in the reaction of peroxodisulfate with the hydrated electron (and the H. atom). In the reaction of SO4.- with 1a (k = 1.6 x 10(9) dm3 mol-1 s-1), a transient (lambda max = 400 nm, shifted to 450 nm at pH 3) is observed. This absorption is due to two intermediates. The major component (lambda max approximately 385 nm) does not react with O2 and has been attributed to an N-centered radical 4a formed upon sulfate release and deprotonation at nitrogen. The minor component, rapidly wiped out by O2, must be due to C-centered OH-adduct radical(s) 6a and/or 7a suggested to be formed by a water-induced nucleophilic replacement. These radicals decay by second-order kinetics. Free cytosine is only formed in low yields (G = 0.14 x 10(-7) mol J-1 upon electron-beam irradiation). In contrast, 1b gives rise to an intermediate absorbing at lambda max = 530 nm (shifted to 600 nm in acid solution) which rapidly decays (k = 6 x 10(4) s-1). In the presence of O2, the decay is much faster (k approximately 1.3 x 10(9) dm3 mol-1 s-1) indicating that this species must be a C-centered radical. This has been attributed to the C(5)-yl radical 8 formed upon the reaction of the C(2')-OH group with the cytidine SO4(.-)-adduct radical 2b. This reaction competes very effectively with the corresponding reaction of water and the release of sulfate and a proton generating the N-centered radical. Upon the decay of 8, sugar radical 11 is formed with the release of cytosine. The latter is formed with a G value of 2.8 x 10(-7) mol J-1 (85% of primary SO4.-) at high dose rates (electron beam irradiation). At low dose rates (gamma-radiolysis) its yield is increased to 7 x 10(-7) mol J-1 due to a chain reaction involving peroxodisulfate and reducing free radicals. Phosphate buffer prevents the formation of the sugar radical at the SO4(.-)-adduct stage by enhancing the rate of sulfate release by deprotonation of 2b and also by speeding up the decay of the C(5)-yl radical into another (base) radical. Cytosine release in cytidine is mechanistically related to strand breakage in poly(C). Literature data on the effect of dioxygen on strand breakage yields in poly(C) induced by SO4.- (suppressed) and upon photoionisation (unaltered) lead us to conclude that in poly(C) and also in the present system free radical cations are not involved to a major extent. This conclusion modifies an essential aspect of the current mechanistic concept.  相似文献   

12.
The interactions of triplet acetone with polyadenylic acid (Poly[A]), polyguanylic acid (Poly[G]), polyadenylic-guanylic acid (Poly[A,G]) and single-stranded DNA (ssDNA) were investigated in neutral aqueous solution using KrF (248 nm) laser flash photolysis. The transient absorption spectra and kinetics of DNA and polynucleotides obtained under acetone sensitization demonstrated that the predominant transient species was guanine radical. These novel findings have offered time-resolved evidence for photochemical modification of DNA and Poly[A,G] at guanine moiety.  相似文献   

13.
Taketatsu T  Toriumi N 《Talanta》1970,17(6):465-473
The absorption spectra of neodymium, holmium and erbium Tiron complexes in aqueous solution have been measured from 340 to 650 nm. The absorbance at the wavelength of maximum absorption band of an aqueous medium containing neodymium (pH 4.5), neodymium (pH 12.0), holmium (pH 5.0) and erbium (pH 5.0) Tiron complexes was about 4 (at 578 nm), 9 (at 571 nm), 9 (at 450 nm) and 5 (at 376 nm) times greater, respectively, than for the same quantities of the corresponding chlorides. The spectrophotometric determination of these elements has been investigated. Combining ratios of Tiron to rare earth have been found to be 3:2 and 2:1.  相似文献   

14.
Laser flash photolysis with excitation at 248 nm was used to study photochemically derived changes of carboxymethylcellulose (CMC) in aqueous solutions. Transient absorption spectra of solutions after photolysis revealed a broad band with a maximum of approximately 720 nm, which could be ascribed to the signal of the hydrated electron. The interaction of the hydrated electron with CMC was slow (<107 dm3 mol?1 s?1), but the OH radical, formed by the decomposition of H2O2, reacted with CMC at a high rate constant (9.5–11.0 × 108 dm3 mol?1 s?1). The rate constant of the reactions of CMC with hydroxyl radicals depended on the conformation of the macromolecules, which was determined by the pH of the solution. Transient absorption was recorded at a wavelength shorter than 370 nm for CMC solutions photolyzed in the presence of H2O2. As a result of OH attack, long‐lived radicals were formed on CMC. The recombination of macroradicals led to the formation of crosslinking bonds between side‐chain groups, and as a result of it an insoluble gel arose in low‐pH solutions. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 43: 505–518, 2005  相似文献   

15.
Transients of uracil and a series of 17 correlated pyrimidines, e.g. methylated bases, nucleosides, nucleotides, and polyuridylic acid [poly(U)] were studied after 248 nm excitation by 20 ns laser pulses. The transient absorption spectra in aqueous solution at room temperature reveal the triplet state and the hydrated electron (e-aq), while the corresponding radical cation could not be observed at pH 6-7. Fast loss of the chromophore in the 260-290 nm range within 0.1 microsecond was observed in aqueous solution in some cases [e.g. poly(U), 5'-UMP, uridine, uracil] and in others (thymine, thymidine) virtually not. This photobleaching is assigned to formation of the photohydrate. The concentration of e-aq shows a quadratic dependence on the laser pulse intensity (IL) in the range (0.2-2) x 10(7) W cm-2 and the quantum yield of electron ejection (phi c-) thus depends linearly on IL. This behaviour, suggesting that the photoionization involves a two-step absorption process, was found for poly(U) and all pyrimidine monomers examined. At a constant IL value of 2 x 10(7) W cm-2, phi c- ranges from 3 x 10(-3) for 1,3-dimethylthymine to 4 x 10(-2) for poly(U). The triplet state shows a much larger transient absorbance (delta A, typically in a broad range, e.g. 290-500 nm) than that of the neutral radical resulting from the radical cation. The triplet state in organic solvents (acetonitrile and ethanol) shows generally a significantly larger delta A value than in aqueous solution. The estimated quantum yields of intersystem crossing at room temperature are compared with those of phosphorescence at -196 degrees C.  相似文献   

16.
Double-stranded (ds) calf thymus DNA (0.4 mM), excited by 20 ns laser pulses at 248 nm, was studied in deoxygenated aqueous solution at room temperature and pH 6.7 in the presence of a sodium salt (10 mM). The quantum yields for the formation of hydrated electrons (phi c-), single-strand breaks (phi ssb) and double-strand breaks (phi dsb) were determined for various laser pulse intensities (IL). phi c- and phi ssb increase linearly with increasing IL; however, phi ssb has a tendency to reach saturation at high IL (greater than 5 X 10(6) Wcm-2). The ratio phi ssb/phi c-, representing the number of ssb per radical cation, is about 0.08 at IL less than or equal to 5 X 10(6) Wcm-2. For comparison, the number of ssb per OH radical reacting with dsDNA is 0.22. On going from argon to N2O saturation, phi ssb and phi dsb become larger by factors of approximately 5 and 10-15, respectively. This enhancement is produced by attack on DNA bases by OH radicals generated by N2O-scavenging of the photoelectrons. While phi ssb is essentially independent of the dose (Etot), phi dsb depends linearly on Etot in both argon- and N2O-saturated solutions. The linear dependence of phi dsb implies a square dependence of the number of dsb on Etot. This portion of dsb formation is explained by the occurrence of two random ssb, generated within a critical distance (h) in opposite strands. For both argon- and N2O-saturated solutions h was found to be of the order of 40-70 phosphoric acid diester bonds. On addition of electron scavengers such as 2-chloroethanol (or N2O plus t-butanol), phi dsb is similar to that in neat, argon-saturated solutions. Thus, hydrated electrons are not involved in the chemical pathway leading to laser-pulse-induced dsb of DNA.  相似文献   

17.
The reactions of e aq, H-atoms, OH radicals and some one electron oxidants and reductants were studied with dithio-oxamide (DTO) in aqueous solutions using pulse radiolysis technique. The transient species formed by the reaction of e aq with DTO at pH 6.8 has an absorption band with λ max at 380 nm and is reducing in nature. H-atom reaction with DTO at pH 6.8 also produced the same transient species. The semi-reduced species was found to be neutral indicating that the electron adduct gets protonated quickly. However at pH 1, the species produced by H-atom reaction had a different spectrum with λ max at 360 and 520 nm. Reaction of acetone ketyl radicals and CO2 radicals with DTO at pH 6.8 gave transient spectra which were identical to that obtained by e aq reaction. However at pH 1, the spectrum obtained by the reaction of acetone ketyl radicals with DTO was similar to that obtained by H-atom reaction at that pH. The transient species formed by OH radical reaction with DTO in the pH range 1–9.2 also has two absorption maxima at 360 and 520 nm. This spectrum was identical with the spectrum obtained by H-atom reaction at pH 1. This means that all these radicals viz. OH, H-atom and (CH3)2COH radicals react with DTO at pH 1 by H-abstraction mechanism. The transient species produced was found to be sensitive to the presence of oxygen. One-electron oxidizing radicals such as Br2 −· and SO4 −· radicals reacted with DTO at neutral pH to give the same species as produced by OH radical reaction having absorption maxima at 360 to 520 nm. At acidic pHs, only Br2 −· and Cl2 −· radicals were able to oxidize DTO to give the same species as produced by OH radical reaction. The semioxidized species is a resonance stabilized species with the electron delocalized over the-N-C-S bond. This species was found to be neutral and non-oxidizing in nature.  相似文献   

18.
Pulse radiolysis technique has been employed to study the reactions of oxidizing (OH, N3) and reducing radicals (eaq, CO2√−, acetone ketyl radical) with 2-hydroxy-3-methoxybenzaldehyde (o-vanillin) at different pH. Hydroxyl radicals react mostly by addition reaction forming radical adducts (λmax=420 nm) and the oxidation is only a minor process even in the alkaline region. The reaction with azide radicals produced phenoxyl radicals (λmax=340 nm), which are formed on fast deprotonation of solute radical cation. Using PMZ√+/PMZ and ABTS√−/ABTS2− as the reference couple, different methods are employed to determine the one-electron reduction potential of o-vanillin and the average value is estimated to be 1.076±0.004 V vs. NHE at pH 6. The phenoxyl radicals of o-vanillin were able to oxidize ABTS2− quantitatively. The eaq is observed to react with o-vanillin with rate constant value of 2×1010 dm3 mol−1 s−1. CO2√− and acetone ketyl radical are also observed to react with o-vanillin by electron transfer mechanism and showed the formation of transient absorption bands with λmax at 350 and 390 nm at pH 4.5 and 9.7, respectively. The pKa of the one-electron reduced species was determined to be 8.1. The results indicate that the aldehydic group is the most preferred site for electron addition.  相似文献   

19.
pH异常变化与癌症和神经退行性等各种疾病相关,监测p H的变化对研究病理状况至关重要。本文设计合成了一种新型的p H荧光探针MC-p H。该探针最大发射波长在近红外区,可有效避免生物样品自身荧光。探针MC-p H中亚胺基团的质子化与非质子化是荧光开关的关键。在酸性溶液中,MC-p H以亚胺离子形式存在,最大吸收波长为617 nm,最大荧光发射波长为663 nm。随着p H逐渐升高,探针MC-p H主要以亚胺形式存在,617 nm处的特征吸收峰强度逐渐降低,并在467 nm处出现新的吸收峰,且663 nm处的荧光强度急剧降低直至消失。探针MC-p H可以监测溶液中p H的变化,线性范围为p H 3.0~8.0,不受其他常见干扰物的影响,且具有良好的细胞渗透性,可监测He La细胞内p H的变化。  相似文献   

20.
The photophysical properties of the fluoroquinolone antibiotic sarafloxacin (SFX) were investigated in aqueous media. SFX in water, at pH 7.4, shows intense absorption with peaks at 272, 322 and 335 nm, (? = 36800 and 17000 dm3 mol?1 cm?1, respectively). Both the absorption and emission properties of SFX are pH‐dependent; pKa values for the protonation equilibria of both the ground (5.8 and 9.1) and excited singlet states (5.7 and 9.0) of SFX were determined spectroscopically. SFX fluoresces weakly, the quantum yield for fluorescence emission being maximum (0.07) at pH 8. Laser flash photolysis and pulse radiolysis studies have been carried out in order to characterize the transient species of SFX in aqueous solution. Triplet–triplet absorption has a maximum at 610 nm with a molar absorption coefficient of 17,000 ± 1000 dm3 mol?1 cm?1. The quantum yield of triplet formation has been determined to be 0.35 ± 0.05. In the presence of oxygen, the triplet reacts to form excited singlet oxygen with quantum yield of 0.10. The initial triplet (3A*) was found to react with phosphate buffer to form triplet 3B* with lower energy and longer lifetime and having an absorption band centered at 700 nm. SFX triplet was also found to oxidize tryptophan to its radical with concomitant formation of the anion radical of SFX. Hence the photosensitivity of SFX could be initiated by the oxygen radicals and/or by SFX radicals acting as haptens.  相似文献   

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