Binding Survey of Ionizable Calix[4]‐1,2‐crown‐3 Nano‐baskets by Differential Pulse Voltammetry

Three nano‐baskets of p‐tert‐butylcalix[4]arene‐1,2‐crown‐3 were synthesized and their binding abilities towards alkali and alkaline earth metals as well as some lanthanides were studied using differential pulse voltammetry. The novelty of this study was the investigation of macrocyclic complexes by voltammetric behaviors of two acidic moieties in each scaffold. Their voltammetric behaviors were closely related to the complex formation by entrapment of cation into crown ether cavity and ion‐dipole interaction between cation and acidic moieties in calixcrowns. The results revealed that the sulfur atom in the crown ring as well as the position of crown‐3 ether in 1,2‐alternate instead of cone conformer changed the binding ability of the scaffold to more cations.     

Alkali cation binding of polymers with different sized crown ethers and photodimerizable units

The polymers which have different sized crown ethers as alkali cation binding sites and photodimerizable cinnamoyl units were prepared by the cationic copolymerization of corresponding monomers. The crown–cation complexation ratio (1:1 or 2:1) was investigated by measuring quantum yields ? of the photodimerization of the crown-connected cinnamoyl units in the presence of alkali metal chlorides and also by measuring the shift of λ_max of alkali metal picrates in THF on addition of the crown polymers. A significant 1:2 complex formation of alkali cations with two different sized crown ether units in the side chain of the polymers was confirmed. The alkali metal cation binding ability and selectivity of the polymers, which were studied by a method of picrate salts extraction, were markedly different from those expected from the combination of polymers of same ring-size crown ether units. When irradiated with ultraviolet (UV) light, the cinnamic acid ester groups of the polymers caused dimerization even in dilute solutions. The cation binding ability of the polymers was largely enhanced by the photodimerization of the cinnamoyl moieties with suitable template cations.     

Evaluation of alkali and alkaline earth metal cation selectivities of lariat ether amides by electrospray ionization mass spectrometry

Lariat ethers with pendant amide groups have shown promise as new ion sensors because of their selectivity towards particular metal ions. In this study we report alkali and alkaline earth metal binding selectivities of dibenzo-16-crown-5 and fifteen dibenzo-16-crown-5 lariat ether amides (LEAs) as determined by electrospray ionization mass spectrometry (ESI-MS). Additionally, the influence of the acid/base nature of the solution on metal cation selectivity is investigated. The validity of using ESI-MS for determination of selectivities is established by analogous experiments using hosts with known binding constants for the same metal cations and solvent systems. Collisionally activated dissociation (CAD) is used to evaluate the influence of the alkali metal cation binding on the fragmentation of the LEAs.     

Cation binding properties of photodimerizable polymers bearing benzodiglyme units

The polymers which have glyme units as alkali cation binding sites and photodimerizable cinnamoyl units were prepared by the radical polymerization of corresponding monomers. The alkali cation binding ability and selectivity of the polymers, which were studied by a method of picrate salts extraction, were strongly dependent on the length of glyme chains. When irradiated with ultraviolet light, the cinnamoyl groups caused dimerization in dilute solutions. Although the photodimerization of the polymers with relatively short glyme chains enhanced their cation binding ability, the photodimerization of the polymers bearing long glyme chains reduced their cation binding ability. The use of alkali metal cations as templates emphasized the effect of photodimerization on the cation binding properties. The effect of alkali metal cations on the quantum yields of the photodimerization of the polymers showed that two or more benzodiglyme units took part in the binding of one cation. The polymers bearing benzodiglymes, crown ethers, and cinnamoyl moieties were also prepared by the radical copolymerization of the corresponding monomers. It was found that the crown ether units of the copolymers predominantly participated in the cation binding. The photodimerization of the copolymers with suitable alkali metal cations as templates strongly enhanced their cation binding ability.     

Solvent Extraction of Alkali Metal Picrates by Lipophilic Cyclodextrin Derivatives

Lipophilic cyclodextrin (CD) derivatives were prepared to extract alkali metal cations from a water phase into an organic phase. The extraction equilibrium constant, K ex, was determined by the solvent extraction method using UV absorption spectroscopy. Hydroxyl groups at the carbons in the 2,6-positions of CD molecules were dipropylated to add the hydrophobicity for dissolving into organic solvents, and furthermore hydroxyl groups at the carbons in the 3-position of these derivatives were acylated as complexing sites with the alkali metal cations. These CD derivatives formed a 1 : 1 complex with alkali metal cations, except for the case of Li+, and transported the alkali metal cations from a water phase into a benzene phase. The initial concentrations of alkali metal cation and picrate anion in the water phase and that of the CD derivatives in the organic phase strongly influenced the extraction equilibrium. Extraction of the alkali metal cation by the derivative without acyl groups was not detected. K ex values of these CD derivatives are of the same order of magnitude as or larger than those of crown ethers. The order of the K ex values in all cases is Li+ < Na+ < K+ Rb+ Cs+, although these CD derivatives have no special selectivity for the alkali metal cations. The cation extraction mechanism was interpreted by an induced-fit mechanism.     

Synthesis and complexing properties of bis-crown ethers incorporating benzo-15-crown-5 and metallocene

Bis-crown ethers in which the benzo-15-crown-5 units were linked to 1,1′-positions of metallocene (M = Fe or Ru) with amide, ester, or ? C? C? bonds were synthesized. Complexing ability of the compounds with alkali, alkali earth, and transition metal cations were measured by the solvent extraction method. The results showed that these crown ethers had high affinity toward alkali metal cations (Li⁺, Na⁺, K⁺, and Rb⁺) and heavy-metal cations (Ag⁺ and Tl⁺). The difference of complexing ability for metal cations between ferrocene and ruthenocene derivatives could not be detected significantly. The extractability of metallocene-bis-crown ethers for metal cations was more larger than that of the corresponding mono-crown ethers, and irregular increments of extractability were explained by assuming the existence of a mixture of 1:1 and 2:1 complexes.     

Electrochemical investigation of nano-baskets of calix[4]-1,3-crowns-5,6 complexes

Four nano-baskets of calixarene including cone 25,27-di(carboxymethoxy)calix[4]arene-crown-5, 1,3-alternate 25,27-di[carboxymethoxy]-calix[4]arene-crown-5, cone 25,27-bis[carboxymethoxy]calix[4]arene-crown-6 and 1,3-alternate 25,27-di[carboxymethoxy]-calix[4]arene-crown-6 were synthesized and their binding abilities towards alkali and alkaline earth metals as well as some lanthanides were studied using differential pulse voltammetry. The novelty of this study was investigation of those macrocyclic complexes by voltammetric behaviors of two acidic moieties in each scaffold during complexation of crown ether ring. Their voltammetric behaviors were closely related to the complex formation by entrapment of cation into crown ether cavity and ion–dipole interaction between cation and acidic moieties in calixcrowns. The results revealed the selective changes in voltammetric behavior of synthesized scaffolds toward the cations. Moreover, the position of crown ether in 1,3-alternate instead of cone enhanced the domain of binding ability to more cations. Furthermore, it was shown that those carboxylic acid moieties, which were far from the crown ether ring in the 1,3-alternate, did not affected by encapsulated cations in the coordination space of crown ether and showed no voltammetric behavior.     

Structural studies and binding properties of pendant diazacoronands—precursors to macrocyclic compounds of planar chirality

Structural studies of pendant diazacoronands having an N-benzoyl, N-acetyl, O-benzyl or O-benzoyl side arm were performed by means of X-ray and temperature-dependent ¹H NMR experiments. The energies of macroring flipping process were determined for three pendant diazacoronands. The complexation properties of pendant diazacoronands toward the alkali metal cations (Na⁺, K⁺, and Rb⁺) were estimated by ESI-MS experiments.     

Selective Complexation of S‐block Cations with Nanotubular Silk Type Cyclopeptides: A DFT Study

Density functional theory (DFT) was used to study the interaction of alkali metal cations (Li⁺, Na⁺ and K⁺) with cyclic peptides constructed from silk type macrocycles ( Silk1, Silk2, Silk3, Silk4, Silk5 and Silk6 ). The calculated binding energies were used as a base for investigating the selectivity of the cyclic peptides in biniding to considered metals ions. The highest cation selectivity for Li⁺ compared to the other alkali metal ions was observed. The orbital nature of different interactions between the metal cations and the cyclic peptides was analyzed using NBO analysis. The main types of driving force for host‐guest interactions was investigated and it was found that the electron‐donating O offers lone pair electrons to the contacting LP* of alkali metal cations     

Characterizing the properties of the N7,N9-dimethylguaninium chloride ion pairs: prospecting for the design of a novel ionic liquid

The structures, infrared spectra, and electronic properties of the N7,N9-dimethylguaninium chloride have been studied. The interaction of one cation with one to four Cl anions and one Cl anion with two cations were investigated. Fifteen stable conformers are obtained. It is found that there are four acidic regions in the vicinity of the guaninium cations. In these regions, the cation could H-bond with one to three Cl anions but no more than three nearest anions. One Cl anion could H-bond with two cations. Additionally, evidence of a Cl...pi interaction between the anion and cation is observed. Among these structures, one cation interaction with two anions and two cations interaction with one anion have the larger interaction energies than the other series. Natural bond orbital analyses and molecular orbitals reveal that the charge transfer from anion(s) to the cation(s) occurs mainly through either the Cllp --> sigma C-H, Cllp --> sigma N-H, or Cllp --> pi C8-N7 interactions. The interaction between Cl and sigma (C/N-H) or pi C-N produces a small bond order. This indicates that the Cl...H (Cl...pi) interaction exhibits a weak covalent character and suggests a strong ionic H-bond (Cl...pi bond). What's more, formation of Cl...H/Cl...pi bond decreases the bond order of the associated C/N-H bond or C8-N7 bond. In addition, examination of vibrational spectrum of each conformer explains the origin of H-bonding character.     

Synthesis of cage-type molecules with pi-cavity and selective gas-phase cation complexation

[structure: see text] Cage-type molecules composed of phenyl walls and caps were synthesized as hosts for the binding of ammonium and alkali metal cations through cation-pi interactions. The synthesis involved a key cyclization step, which was markedly dependent on the capping component. Binding studies by electrospray ionization mass spectrometry toward lithium, sodium, potassium, and ammonium cations showed that the cage-type molecules selectively form a 1:1 complex. A competitive binding study showed that cage 3c (R = Et, R' = OMe) has a preference toward lithium cation while cage 4b (R = Me, R' = OMe) has a similar preference toward both lithium and ammonium ion in the presence of others. This selectivity pattern was tentatively explained by the gate size of the cage-type compounds, not by their cavity size.     

Synthesis, Conformational Studies, X-ray Structures, and Complexation Properties of Semirigid Macrocyclic Phosphonamides

The semirigid phosphonamide ligands 1-5 have been synthesized from the macrocyclic precursors 6-9 by reaction with 1,3-propanediol ditosylate or 1,2-dichloroethane. For the thiophosphoryl compounds 1 and 2, and the phosphoryl derivative 5, the reactions were carried out in biphasic aqueous NaOH solutions. The phosphoryl derivatives 3 and 4 were better obtained from NaH in anhydrous tetrahydrofuran. The conformations of the hosts in solution were deduced from low-temperature NMR and NOE difference experiments. Conformational equilibria between exo and endo forms are observed for the 18-membered macrocycles 1 and 3. The exo conformer predominates in solution for the 21-membered macrocycle 2, whereas 4 exists as rapidly exchanging conformers. The X-ray crystal structures of macrocycles 1, 2, and 5 have been determined as well as the complexes 1.Hg(SCN)(2) and 5.LiNO(3). In the Hg(2+) complex the metal ion is located out of the macrocyclic cavity and is coordinated to the thiophosphoryl unit. In 5.LiNO(3)()()the Li(+) cation is located inside the macrocyclic cavity and is coordinated to a tetrahedral array of oxygen donors. Free energies of complexation (DeltaG degrees ) of the phosphorylated ligands 3-5 with alkali metal and ammonium cations were determined in CHCl(3) saturated with H(2)O by picrate extraction experiments. The -DeltaG degrees values are greatest for 4 complexing K(+) and NH(4)(+) (7.3 and 8.0 kcal/mol, respectively). The relationships between structure and binding are discussed.     

Relative binding affinities of alkali metal cations to

The binding affinity and selectivity of a new ionophore, [1(8)]starand (1), toward alkali metal cations in methanol were examined through NMR titration experiments and free energy perturbation (FEP) and molecular dynamics simulations. The preference was determined to be K(+) > Rb(+) > Cs(+) > Na(+) > Li(+) in both FEP simulations and NMR experiments. The FEP simulation results were able to predict the relative binding free energies with errors less than 0.13 kcal/mol, except for the case between Li(+) and Na(+). The cation selectivity was rationalized by analyzing the radial distribution functions of the M-O and M-C distances of free metal cations in methanol and those of metal-ionophore complexes in methanol.     

Theoretical study of alpha/beta-alanine and their protonated/alkali metal cationized complexes

Density functional theory has been employed to model the structure and the relative stabilities of alpha/beta-alanine conformers and their protonated and alkali metal cationized complexes. In general, we find that the behavior of the beta-alanine (beta-Ala) system is quite similar to that of alpha-alanine (alpha-Ala). However, the presence of the methylene group (-CH2-) at the beta position in beta-Ala leads to a few key differences. First, the intramolecular hydrogen bonding patterns are different between free alpha- and beta-Ala. Second, the stability of zwitterionic species (in either the free ligand or alkali metal cationized complexes) is often enhanced in beta-Ala. Third, the preferred mode of alkali metal cation (M+) binding may also differ in alpha- and beta-Ala. Natural energy decomposition analysis has been applied here to gain further insight into the effects of the ligand, cation size, and mode of binding on the nature of interaction in these M+-Ala complexes.     

The Preorganization Effect of the Calix[4]arene Platform on the Extraction Properties of Acetylhydrazide Groups with Transition Metal Ions

The binding properties of the cone conformer of O,O,O,O-tetrakis[hydrazinocarbonylmethyl]-4-tert-butylcalix[4]arene, the cone and the 1,3-alternate conformers of the corresponding thia analogue have been evaluated by means of liquid–liquid extraction for a large variety of metal ions. The extraction constants and the stoichiometries of the complexes formed have been determined. Comparison of the extraction properties of calix[4]arenes with their acyclic monomeric analogue clearly demonstrated, that the preorganization of acetylhydrazide groups on the calix[4]arene platform is the cause for a significant improvement of its binding properties. The presence of additional “soft” nitrogen binding sites in acetylhydrazide derivatives of calix[4]arenes compared to their amide derivatives leads to a shift from their classical selectivity for alkali and alkaline earth cations to transition metals. The cone conformer of tetrathiacalix[4]arene shows higher selectivity in a series of d-metal ions compared with its “classical” analogue. The 1,3-alternate conformer exhibits an excellent extraction selectivity for Cu²⁺ and Hg²⁺.     

Synthesis of double-armed lariat ethers with pyrene moieties at each end of two sidearms and their fluorescence properties in the presence of alkali metal and alkaline earth metal cations

Two types of double-armed lariat ether derivatives having pyrene moieties at each end of two sidearms, (3x + 1)-crown-x derivatives 1 (x = 5), 2 (x = 6), and 3 (x = 4) (type A) and 3y-crown-y derivatives, 6 (y = 5) and 7 (y = 6) (type B), were synthesized, and their complexation behavior toward alkali metal and alkaline earth metal cations was examined by fluorescence spectroscopy. Pyrene excimer emission decreased accompanied by an increase in monomer emission upon metal ion complexation. This finding is ascribed to the change of the spatial distance of two pyrene rings by movement suppression of both the crown ring and one of the two sidearms based on complexation with the metal cation. The selectivity for alkaline earth metal cations was highly dependent on the fitness of the host cavity and the guest size. Although most of the fluorophores did not respond to alkali metal cations, only trans-7a containing an 18-crown-6 ring showed K(+) selectivity.     

Synthesis,structure, and complexation properties of tetraamide derivatives of thiacalix[4]arene in different conformations

The interaction of p-tert-butylthiacalix[4]arene with N,N-diethylchloroacetamide was studied in the presence of alkali metal carbonates in acetone. Three stereoisomers, viz., cone, partial cone, and 1,3-alternate, of the tetraamide derivative of thiacalixarene substituted at the lower rim were synthesized selectively using the template effect of alkali metal cations, as well as a complex of the 1,3-alternate stereoisomer with potassium chloride. The structures of the compounds synthesized were studied by 2D NMR spectroscopy. A high extraction ability of the compounds toward alkali metal cations was demonstrated. Dedicated to Academician A. L. Buchachenko on the occasion of his 70th birthday. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 2041–2049, September, 2005.     

Infrared multiple photon dissociation spectroscopy of cationized histidine: effects of metal cation size on gas-phase conformation

The gas phase structures of cationized histidine (His), including complexes with Li(+), Na(+), K(+), Rb(+), and Cs(+), are examined by infrared multiple photon dissociation (IRMPD) action spectroscopy utilizing light generated by a free electron laser, in conjunction with quantum chemical calculations. To identify the structures present in the experimental studies, measured IRMPD spectra are compared to spectra calculated at B3LYP/6-311+G(d,p) (Li(+), Na(+), and K(+) complexes) and B3LYP/HW*/6-311+G(d,p) (Rb(+) and Cs(+) complexes) levels of theory, where HW* indicates that the Hay-Wadt effective core potential with additional polarization functions was used on the metals. Single point energy calculations were carried out at the B3LYP, B3P86, and MP2(full) levels using the 6-311+G(2d,2p) basis set. On the basis of these experiments and calculations, the only conformation that reproduces the IRMPD action spectra for the complexes of the smaller alkali metal cations, Li(+)(His) and Na(+)(His), is a charge-solvated, tridentate structure where the metal cation binds to the backbone carbonyl oxygen, backbone amino nitrogen, and nitrogen atom of the imidazole side chain, [CO,N(α),N(1)], in agreement with the predicted ground states of these complexes. Spectra of the larger alkali metal cation complexes, K(+)(His), Rb(+)(His), and Cs(+)(His), have very similar spectral features that are considerably more complex than the IRMPD spectra of Li(+)(His) and Na(+)(His). For these complexes, the bidentate [CO,N(1)] conformer in which the metal cation binds to the backbone carbonyl oxygen and nitrogen atom of the imidazole side chain is a dominant contributor, although features associated with the tridentate [CO,N(α),N(1)] conformer remain, and those for the [COOH] conformer are also clearly present. Theoretical results for Rb(+)(His) and Cs(+)(His) indicate that both [CO,N(1)] and [COOH] conformers are low-energy structures, with different levels of theory predicting different ground conformers.     

Potentiometric Selectivities of Dibenzo-16-crown-5 Compounds for Alkali and Alkaline Earth Metal Cations and Ammonium Ions

Potentiometric selectivities toward alkali and alkaline earth metal cations and ammonium ions are utilized to probe the complexation of these cationic species by dibenzo-16-crown-5 lariat ethers. Attachment of one or two pendant groups to the central carbon of the three-carbon bridge in dibenzo-16-crown-5 markedly alters the potentiometric responses of the ionophores when incorporated in solvent polymeric membrane electrodes. Results obtained for dibenzo-16-crown-5 compounds with coordinating side arms containing ether, carboxylic acid, ester, and amide groups provide insight into the role of the side arm in metal ion complexation by lariat ether compounds.     

A halogen-bonding-based heteroditopic receptor for alkali metal halides

A new heteroditopic receptor for alkali metal halides has been designed and synthesized. It is comprised of a well-established motif for cation binding and a motif for halogen-bonding-based anion recognition processes. The single-crystal X-ray structure of the complex between the heteroditopic receptor and sodium iodide is reported. Thanks to the cooperativity of metal coordination and the strong I-...I halogen bonding, the ion pair is fully separated. The boosting effect of the binding of the anion through halogen bonding on the coordination of the cation by the receptor has been proved also in solution by NMR experiments. The selectivity of the new heterotopic receptor toward different alkali metal halides has been tested by ESI mass experiments.