Malarial parasites accumulate labile zinc pools

The malarial parasite, Plasmodium falciparum, is an intracellular pathogen and partially dependent on nutrient uptake for survival. In this issue of Chemistry & Biology, Marvin et al. demonstrate that zinc is essential for parasite growth and that the parasite maintains substantial labile cytosolic and mitochondrial zinc pools.     

Identification of four novel phosphorylation sites in estrogen receptor α: impact on receptor-dependent gene expression and phosphorylation by protein kinase CK2

Background

Human S100A12 is a member of the S100 family of EF-hand calcium-modulated proteins that are associated with many diseases including cancer, chronic inflammation and neurological disorders. S100A12 is an important factor in host/parasite defenses and in the inflammatory response. Like several other S100 proteins, it binds zinc and copper in addition to calcium. Mechanisms of zinc regulation have been proposed for a number of S100 proteins e.g. S100B, S100A2, S100A7, S100A8/9. The interaction of S100 proteins with their targets is strongly dependent on cellular microenvironment.

Results

The aim of the study was to explore the factors that influence S100A12 oligomerization and target interaction. A comprehensive series of biochemical and biophysical experiments indicated that changes in the concentration of calcium and zinc led to changes in the oligomeric state of S100A12. Surface plasmon resonance confirmed that the presence of both calcium and zinc is essential for the interaction of S100A12 with one of its extracellular targets, RAGE – the Receptor for Advanced Glycation End products. By using a single-molecule approach we have shown that the presence of zinc in tissue culture medium favors both the oligomerization of exogenous S100A12 protein and its interaction with targets on the cell surface.

Conclusion

We have shown that oligomerization and target recognition by S100A12 is regulated by both zinc and calcium. Our present work highlighted the potential role of calcium-binding S100 proteins in zinc metabolism and, in particular, the role of S100A12 in the cross talk between zinc and calcium in cell signaling.     

Reversible Fluorescent Probes for Biological Redox States

The redox chemistry of the cell is key to its function and health, and the development of chemical tools to study redox biology is important. While fluxes in oxidative state are essential for healthy cell function, a chronically elevated oxidative capacity is linked to disease. It is therefore essential that probes of biological redox states distinguish between these two conditions by the reversible sensing of changes over time. In this review, we discuss the current progress towards such probes, and identify key directions for future research in this nascent field of vital biological interest.     

锡酸钾对流动锌酸钾碱液中锌沉积/溶解的影响

研究了在流动的高浓度锌酸钾溶液中锡酸钾添加剂对锌负极沉积/溶解行为的影响. 循环伏安测试结果表明, 扫描速度为1 mV/s时, 随着添加锡酸钾浓度的增加, 阴极分支更早出现沉积, 溶解峰的峰值逐渐减小; 随着扫描速度的增加, 这种规律变得不明显. 利用SEM观测电沉积500 s的沉积物形貌发现, 向基础溶液中添加锡酸钾有利于晶种的产生和晶粒的生长. EDS测试结果表明含锡酸钾的锌酸钾溶液中沉积层含有锌和锡. 自放电测试结果表明, 基础电解液加入锡酸钾后自放电现象得到了明显的改善, 充满电静置12 h后加入0.1 mol/L锡酸钾的电池放电库仑效率从基础溶液的60.0%提高到81.1%.     

Effects of inhibitors of Delta24(25)-sterol methyl transferase on the ultrastructure of epimastigotes of Trypanosoma cruzi.

Trypanosoma cruzi is the ethiological agent of Chagas disease. New compounds are being developed based on the biosynthesis and function of sterols, because T. cruzi has a requirement for specific endogenous sterols for growth and survival. Sterol biosynthesis inhibitors (SBIs) are drugs commonly used against fungal diseases. These drugs act by depleting essential and specific membrane components and/or inducing the accumulation of toxic intermediary or lateral products of the biosynthetic pathway. In this work we present the effects of WSP488, WSP501, and WSP561, specific inhibitors of Delta24(25)-sterol methyl transferase, on the ultrastructure of T. cruzi epimastigotes. All three drugs inhibited parasite multiplication at low concentrations, with IC50 values of 0.48, 0.44, and 0.48 muM, respectively, and induced marked morphological changes including (a) blockage of cell division; (b) swelling of the mitochondrion, with several projections and depressions; (c) swelling of the perinuclear space; (d) presence of autophagosomes and myelin-like figures; (e) enlargement of the flagellar pocket and of a cytoplasmic vacuole located in close association with the flagellar pocket; (f) detachment of the membrane of the cell body; and (g) formation of a vesicle at the surface of the parasite between the flagellar pocket and the cytostome. Our results show that these drugs are potent in vitro inhibitors of growth of T. cruzi.     

Measuring flux distributions for diffusion in the small-numbers limit

For the classical diffusion of independent particles, Fick's law gives a well-known relationship between the average flux and the average concentration gradient. What has not yet been explored experimentally, however, is the dynamical distribution of diffusion rates in the limit of small particle numbers. Here, we measure the distribution of diffusional fluxes using a microfluidics device filled with a colloidal suspension of a small number of microspheres. Our experiments show that (1) the flux distribution is accurately described by a Gaussian function; (2) Fick's law, that the average flux is proportional to the particle gradient, holds even for particle gradients down to a single particle difference; (3) the variance in the flux is proportional to the sum of the particle numbers; and (4) there are backward flows, where particles flow up a concentration gradient, rather than down it. In addition, in recent years, two key theorems about nonequilibrium systems have been introduced: Evans' fluctuation theorem for the distribution of entropies and Jarzynski's work theorem. Here, we introduce a new fluctuation theorem, for the fluxes, and we find that it is confirmed quantitatively by our experiments.     

Continous monitoring of copper and cadmium in zinc plat electrolyte usinga microprocessor-based batter-operated data acquisition system,multiple ion-selective electrodes and redundancy principles

Monitoring of both copper and cadmium is essential in the electrolytic production of zinc because these elemetns must be removed in order to improve the efficiency of the zinc electro-refining process. A new high-volume flow-through cell with an assembly of four ion-selective electrodes (four copper, four cadmium or two copper and two cadmium electrodes), reference electrode and temperature probe coupled with microprocessor-based instrumentattion can be used for this purpose. Determinations can be done continuously for 72-h periods without maintenance in an on-line mode. when multiple electrode determinations and redundncy principles are implemented. A microcomputer system incorporating low-power CMOS technology with multichannel and multiplexing capabilities is used for data acquisition. The use of the battery-powered data acquisition system provides excellent signal-to-noise ratios, meets the special demands of the harsh industrial environment, and is preferable to conventional mains-powered monitoring systems based on ion-selective electodes.     

Discovering the Intrinsic Causes of Dendrite Formation in Zinc Metal Anodes: Lattice Defects and Residual Stress

Developing a highly stable and dendrite-free zinc anode is essential to the commercial application of zinc metal batteries. However, the understanding of zinc dendrites formation mechanism is still insufficient. Herein, for the first time, we discover that the interfacial heterogeneous deposition induced by lattice defects and epitaxial growth limited by residual stress are intrinsic and critical causes for zinc dendrite formation. Therefore, an annealing reconstruction strategy was proposed to eliminate lattice defects and stresses in zinc crystals, which achieve dense epitaxial electrodeposition of zinc anode. The as-prepared annealed zinc anodes exhibit dendrite-free morphology and enhanced electrochemical cycling stability. This work first proves that lattice defects and residual stresses are also very important factors for epitaxial electrodeposition of zinc in addition to crystal orientation, which can provide a new mechanism for future researches on zinc anode modification.     

Rapid discovery of inhibitors of <Emphasis Type="Italic">Toxoplasma gondii</Emphasis> using hybrid structure-based computational approach

Toxoplasma (T.) gondii, the causative agent of toxoplasmosis, is a ubiquitous opportunistic pathogen that infects individuals worldwide, and is a leading cause of severe congenital neurologic and ocular disease in humans. No vaccine to protect humans is available, and hypersensitivity and toxicity limit the use of the few available medicines. Therefore, safer and more effective medicines to treat toxoplasmosis are urgently needed. Using the Hybrid Structure Based (HSB) method, we have previously identified small molecule inhibitors of P. falciparum that seem to target a novel protein–protein interaction between the Myosin tail interacting protein and myosin light chain. This pathway has been hypothesized to be involved in invasion of host erythrocytes by the parasite and is broadly conserved among the apicomplexans. Guided by similar computational drug design approaches, we investigated this series of small molecules as potential inhibitors of T. gondii. Compound C3-21, identified as the most active inhibitor in this series, exhibited an IC₅₀ value ~500 nM against T. gondii. Among the 16 structural analogs of C3-21 tested thus far, nine additional compounds were identified with IC₅₀ values <10.0 μM. In vitro assays have revealed that C3-21 markedly limits intracellular growth of T. gondii tachyzoites, but has no effect on host cell human foreskin fibroblasts (HFF) at concentrations more than a log greater than the concentration that inhibits the parasites.     

Chemogenomics and parasitology: small molecules and cell-based assays to study infectious processes

Infectious diseases caused by protozoan parasites--malaria, sleeping sickness, leishmaniasis, Chagas' disease, toxoplasmosis--remain chronic problems for humanity. We lack vaccines and have limited drug options effective against protozoa. Research into anti-protozoan drugs has accelerated with improved in vitro cultivation methods, enhanced genetic accessibility, completed genome sequences for key protozoa, and increased prominence of protozoan diseases on the agendas of well-resourced public figures and foundations. Concurrent advances in high-throughput screening (HTS) technologies and availability of diverse small molecule libraries offer the promise of accelerated discovery of new drug targets and new drugs that will reduce disease burdens imposed on humanity by parasitic protozoa. We provide a status report on HTS technologies in hand and cell-based assays under development for biological investigations and drug discovery directed toward the three best-characterized parasitic protozoa: Trypanosoma brucei, Plasmodium falciparum, and Toxoplasma gondii. We emphasize cell growth assays and new insights into parasite cell biology speeding development of better cell-based assays, useful in primary screens for anti-protozoan drug leads and secondary screens to decipher mechanisms of action of leads identified in growth assays. Small molecules that interfere with specific aspects of protozoan biology, identified in such screens, will be valuable tools for dissecting parasite cell biology and developing anti-protozoan drugs. We discuss potential impacts on drug development of new consortia among academic, corporate, and public partners committed to discovery of new, effective anti-protozoan drugs.     

The Effects of Photosensitizing Dyes Fagopyrin and Hypericin on Planktonic Growth and Multicellular Life in Budding Yeast

Naphthodianthrones such as fagopyrin and hypericin found mainly in buckwheat (Fagopyrum spp.) and St. John’s wort (SJW) (Hypericum perforatum L.) are natural photosensitizers inside the cell. The effect of photosensitizers was studied under dark conditions on growth, morphogenesis and induction of death in Saccharomyces cerevisiae. Fagopyrin and hypericin induced a biphasic and triphasic dose response in cellular growth, respectively, over a 10-fold concentration change. In fagopyrin-treated cells, disruptions in the normal cell cycle progression were evident by microscopy. DAPI staining revealed several cells that underwent premature mitosis without budding, a striking morphological abnormality. Flow Cytometric (FC) analysis using a concentration of 100 µM showed reduced cell viability by 41% in fagopyrin-treated cells and by 15% in hypericin-treated cells. FC revealed the development of a secondary population of G1 cells in photosensitizer-treated cultures characterized by small size and dense structures. Further, we show that fagopyrin and the closely related hypericin altered the shape and the associated fluorescence of biofilm-like structures. Colonies grown on solid medium containing photosensitizer had restricted growth, while cell-to-cell adherence within the colony was also affected. In conclusion, the photosensitizers under dark conditions affected culture growth, caused toxicity, and disrupted multicellular growth, albeit with different efficiencies.     

一闪一闪亮晶晶,我们身体需要锌

Although their contents in the human body are extremely low, even less than 0.01 wt%, trace elements are essential for the human body. As a kind of trace element, zinc plays an important role in human growth and development, reproductive inheritance, immunity, endocrine and other important physiological processes. At the same time, zinc deficiency is also a common phenomenon among Chinese children. Through the fictional experience of the fictional Zinc Gu Cheng, this article uses the anthropomorphic approach to popularize the role of zinc. Finally, the story ends with a little girl's dream. We hope that through this short story, people can understand the importance of zinc to the human body and realize the indispensable role of trace elements.     

The effect of zinc(II) on the growth of <Emphasis Type="Italic">E . coli</Emphasis> studied by microcalorimetry

By using an LKB2277 Bioactivity Monitor, stop-flow mode, the power-time curves of E . coli at 37°C effected by zinc(II) were determined. Some parameters, such as growth rate constants k, inhibitory ratio I, the maximum heat production rate P _max heat output Q and the time in the maximum heat production t _max were obtained. According these parameters, we found that a low concentration of zinc(II) had a promoting action on the growth of E. coli, but a high concentration of zinc(II) had an inhibitory action. The toxicity of zinc(II) can also be expressed as half inhibitory concentration IC ₅₀ of zinc(II), i.e., 50% effective in this inhibition. The value of IC ₅₀ of zinc(II) on E. coliis 28.09 µg mL^-1. The assay is quantitative, inexpensive and versatile.     

Light‐Induced Retinal Degeneration Is Prevented by Zinc,a Component in the Age‐related Eye Disease Study Formulation†

Mineral supplements are often included in multivitamin preparations because of their beneficial effects on metabolism. In this study, we used an animal model of light‐induced retinal degeneration to test for photoreceptor cell protection by the essential trace element zinc. Rats were treated with various doses of zinc oxide and then exposed to intense visible light for as long as 8 h. Zinc treatment effectively prevented retinal light damage as determined by rhodopsin and retinal DNA recovery, histology and electrophoretic analysis of DNA damage and oxidized retinal proteins. Zinc oxide was particularly effective when given before light exposure and at doses two‐ to four‐fold higher than recommended by the age‐related eye disease study group. Treated rats exhibited higher serum and retinal pigment epithelial zinc levels and an altered retinal gene expression profile. Using an Ingenuity database, 512 genes with known functional annotations were found to be responsive to zinc supplementation, with 45% of these falling into a network related to cellular growth, proliferation, cell cycle and death. Although these data suggest an integrated and extensive regulatory response, zinc induced changes in gene expression also appear to enhance antioxidative capacity in retina and reduce oxidative damage arising from intense light exposure.     

锌酶的计算模拟:挑战与最新进展

锌酶在人体中分布非常广泛,种类繁多,是当前最受关注的金属酶之一。由于在锌配位结构上的多样性以及Zn²⁺饱和的d轨道带来的“光谱寂静”性,导致许多实验研究手段受限。计算模拟在锌酶的研究中发挥着越来越重要的作用,已经成为不可或缺的研究工具。现代量子化学计算模拟方法,特别是被视为研究生物大分子体系非常有效的QM/MM组合方法,目前已经被广泛应用于探讨复杂多变的锌配位结构以及锌酶催化反应机理。通过在QM/MM水平下开展的分子动力学模拟,可以揭示锌酶体系中结构与功能间的相互关系。此外,分子力场方法在锌酶研究中同样发挥了不可替代的作用,由于传统力场普遍无法正确描述锌配位结构,因此,锌酶分子力场的开发具有迫切的现实意义。本文总结了近年来锌酶计算模拟领域的最新进展,提出了锌酶计算研究中还有待解决的一些问题。     

Controlled growth of well-aligned ZnO nanorod array using a novel solution method

A simple method of synthesizing nanomaterials and the ability to control the size and position of them are crucial for fabricating nanodevices. In this work, we developed a novel ammonia aqueous solution method for growing well-aligned ZnO nanorod arrays on a silicon substrate. For ZnO nanorod growth, a thin zinc metal seed layer was deposited on a silicon substrate by thermal evaporation. Uniform ZnO nanorods were grown on the zinc-coated silicon substrate in aqueous solution containing zinc nitrate and ammonia water. The growth temperature was as low as 60-90 degrees C and a 4-in. wafer size scale up was possible. The morphology of a zinc metal seed layer, pH, growth temperature, and concentration of zinc salt in aqueous solution were important parameters to determine growth characteristics such as average diameters and lengths of ZnO nanorods. We could demonstrate the discrete controlled growth of ZnO nanorods using sequential, tailored growth steps. By combining our novel solution method and general photolithography, we selectively grew ZnO nanorod arrays on a patterned silicon substrate. Our concepts on controlled ZnO nanorod growth using a simple solution method would be applicable for various nanodevice fabrications.     

Synthesis of Aqueous CdTe Nanocrystals with High Efficient Blue‐Green Emission of Exciton

As one of the most popular nanocrystals (NCs), aqueous CdTe NCs have very weak green emission under conventional synthesis conditions. In this work, we report the first example of blue‐emitting CdTe NCs directly synthesized in aqueous solution by slowing down the growth rate after nucleation. The key for the synthesis is the optimization of NC growth conditions, namely pH range of 7.5 to 8.5, TGA/Cd ratio of 3.6, Cd/Te ratio of 10, and Te concentration of 2×10^?5 mol/L, to get a slow growth rate after nucleation. The as‐prepared blue‐emitting CdTe NCs have small size (as small as 1.9 nm) and bright emission [with 4% photoluminescence quantum yield (PL QY) at 486 nm and 17% PLQY at 500 nm]. Transmission electron microscopy (TEM) images of the as‐prepared CdTe show monodispersed NCs which exhibit cubic zinc blend structure. Moreover, time‐resolved PL decay and X‐ray photoelectron spectroscopy (XPS) results show the as‐prepared NCs have better surface modification by ligand, which makes these luminescent small CdTe NCs have higher photoluminescence quantum yield, compared with NCs synthesized under conventional conditions.     

Gelation Kinetics and Mechanical Properties of Thiol-Tetrazole Methylsulfone Hydrogels Designed for Cell Encapsulation

Hydrogel precursors that crosslink within minutes are essential for the development of cell encapsulation matrices and their implementation in automated systems. Such timescales allow sufficient mixing of cells and hydrogel precursors under low shear forces and the achievement of homogeneous networks and cell distributions in the 3D cell culture. The previous work showed that the thiol-tetrazole methylsulfone (TzMS) reaction crosslinks star-poly(ethylene glycol) (PEG) hydrogels within minutes at around physiological pH and can be accelerated or slowed down with small pH changes. The resulting hydrogels are cytocompatible and stable in cell culture conditions. Here, the gelation kinetics and mechanical properties of PEG-based hydrogels formed by thiol-TzMS crosslinking as a function of buffer, crosslinker structure and degree of TzMS functionality are reported. Crosslinkers of different architecture, length and chemical nature (PEG versus peptide) are tested, and degree of TzMS functionality is modified by inclusion of RGD cell-adhesive ligand, all at concentration ranges typically used in cell culture. These studies corroborate that thiol/PEG-4TzMS hydrogels show gelation times and stiffnesses that are suitable for 3D cell encapsulation and tunable through changes in hydrogel composition. The results of this study guide formulation of encapsulating hydrogels for manual and automated 3D cell culture.     

Synthesis and Characterization of Zinc Oxide Nano-particles by Solid State Chemical Reaction Method

Several important synthetic parameters such as precursor concentration, reaction time are found to determine the growth of ZnO nanostructures. These reaction parameters can be tuned to produce a variety size of nanostructures. In this work we show the importance of these parameters on the size of synthesized zinc oxide nano-powders. ZnO nanoparticles are synthesized by the solid-state reaction using ZnSO₄·7H₂O and NaOH as the reagents. In this method Zn(OH)₂ is the intermediate product of the reaction, we show that by adjusting the molar ratio of the reagents and grinding time, we can be removed this unwanted component in the final product so for obtaining pure ZnO nanostructures the calcinations process is not necessary, also we can tune the size of ZnO nanoparticles. XRD spectra of the nanoparticles demonstrate typical diffraction peaks of a well-crystalline Wurtzite ZnO structure transmission electron microscopic observations show that these nanoparticles are of hexagonal phase ZnO mostly in round shapes and he composition analysis by EDX indicate that final product is pure ZnO. In the optimum conditions by XRD analysis we see that the mean grain size of synthesized zinc oxide nano-particles is about 44 nm.