Synthesis,characterization and X-ray crystallographic investigation of 2-D hybrid hydrogen bonded and rectangular grid networks in Cu(II) and Co(II) metal complexes

Two copper/cobalt metal complexes, [Cu(l-cys)(2,2′-bpy)(H₂O)] (1) and {[Co(l-cys)(4,4′-bpy)(H₂O)]·H₂O}_n (2), with the N-donor ligands 2,2′-bipyridyl/4,4′-bipyridyl and the l-cysteate dianion (l-cys) have been synthesized by different reaction methods and structurally characterized. Compound 1 exists as a discrete monomeric unit in which the metal ions possess a distorted square-pyramidal coordination environment provided by nitrogen atoms from the 2,2′-bpy ligand and the amino-carboxylate group of l-cys in a chelated coordination, constituting the square base, and with a water molecule occupying the axial coordination site to complete the penta coordination. Packing and hydrogen bonding interactions of 1 reveal that the screw related monomeric units are involved in intermolecular hydrogen bonding with the formation of helical bilayers via O–H?O and N–H?O interactions. These hydrogen bonded bilayered helical nets are involved in stacking and C–H?O interactions which generate a two dimensional hydrogen bonded network in the bc-plane. Complex 2 is a two dimensional coordination polymer which is insoluble in common polar and non-polar solvents. The coordination around the metal center possesses a distorted octahedral geometry. The adjacent metal centers are bridged via the carboxylate group of the l-cys moiety in a syn–anti fashion, generating a one dimensional helical network along the b-axis. Adjacent helical chains are further pillared by the 4,4′-bpy ligand through the terminal nitrogen atoms, generating a two dimensional square grid type coordination network. Both the complexes are characterized well by various physico-chemical techniques such as CHN analysis, IR spectroscopy, PXRD and CD analysis.     

Copper(II)-saccharinato complexes with piperazine and N-(2-aminoethyl)piperazine ligands

Two copper(II) complexes of the saccharinate anion (sac) with piperazine (ppz) and N-(2-aminoethyl)piperazine (aeppz), namely [Cu(sac)₂(ppz)(H₂O)]_n (1) and trans-[Cu(sac)₂(aeppz)₂] (2), have been synthesized and characterized by elemental analyses, UV–Vis, FT-IR, TGA/DTA, X-ray diffraction and magnetic measurements. The ppz ligands in 1 bridge the copper(II) centers through both nitrogen atoms to form a 1D helical chain structure and the distorted trigonal-bipyramidal coordination geometry at each copper center is completed by an aqua and a pair of N-bonded sac ligands. The helical chains are linked by Ow–H?O hydrogen bonds to build a 2-D network. In complex 2, copper(II) ions are octahedrally coordinated by two sac anions and two neutral aeppz ligands, displaying a distorted octahedral coordination. Sac is O-bonded via the carbonyl group, while ppzea acts as a N,N′-bidentate chelating ligand. The molecules are connected by N–H?N and N–H?O hydrogen bonds, forming a linear chain. In the thermal decomposition of both complexes, the removal of the aqua and ppz or aeppz ligand takes place endothermically in the first stages and the sac moiety undergoes highly exothermic decomposition at higher temperatures to give CuO.     

Decavanadates with [Et3NH] and [Me2HN(CH2)2NHMe2]: Variation in protonation state and self-assembly

Synthesis, thermal behaviour and crystal structures of [Et₃NH]₄[V₁₀O₂₆(OH)₂] (1) and [Me₂HN(CH₂)₂NHMe₂]₃[V₁₀O₂₈] · 4H₂O (2) are reported. In the crystal lattice of 1, the anions form discrete dimers via O–H···O hydrogen bonds and the cations are connected to the respective anions through N–H···O hydrogen bonds. On the other hand, 2 forms a complex three-dimensional network due to involvement of the cations, the anions and the lattice water in O–H···O and N–H···O hydrogen bonds.     

Bis­(acetato‐O)­tetrakis­(imidazole‐N3)­nickel(II)

In the title compound, [Ni(C₂H₃O)₂(C₃H₄N₂)₄], the Ni atom is coordinated centrosymmetrically by four N and two O atoms in an octahedral coordination [Ni—N = 1.986 (3) and 2.054 (3) Å; Ni—O = 2.697 (3) Å]. The O atoms of the acetate anions form hydrogen bonds to adjacent imidazole moieties, with the free O atom forming a somewhat shorter bond [N?O = 2.679 (3) and 2.870 (4) Å]. The hydrogen bonds give rise to a two‐dimensional layer structure.     

(R)‐1‐Phenyl­ethyl­ammonium 6‐amino‐5‐nitro­pyrimidine‐2,4(1H,3H)‐dionate (R)‐1‐phenyl­ethyl­amine hemisolvate: hydrogen‐bonded sheets of ions with pendent solvent mol­ecules

In the title compound, 2C₈H₁₂N⁺·2C₄H₃N₄O₄⁻·C₈H₁₁N, the anions are linked by paired N—H⋯N hydrogen bonds [H⋯N = 2.07 and 2.11 Å, N⋯N = 2.942 (3) and 2.978 (3) Å and N—H⋯N = 173 and 170°] and by paired N—H⋯O hydrogen bonds [H⋯O = 1.98 and 2.05 Å, N⋯O = 2.855 (3) and 2.917 (3) Å, and N—H⋯O = 173 and 167°] into chains of rings. These chains are linked into sheets by further N—H⋯O hydrogen bonds in which all of the donors are provided by the cations [H⋯O = 1.83–2.17 Å, N⋯O = 2.747 (3)–2.965 (3) Å and N—H⋯O = 141–168°]. The neutral amine molecule is pendent from the sheet and is linked to it by a single N—H⋯N hydrogen bond [H⋯N = 2.00 Å, N⋯N = 2.901 (3) Å and N—H⋯N = 175°].     

Synthesis and characterization of two new coordination supramolecular structures from a versatile unsymmetric 5-(4-pyridyl)-1,3,4-oxadiazole-2-thione (Hpot) ligand

Two new inorganic–organic coordination networks based on a versatile and unsymmetric building block 5-(4-pyridyl)-1,3,4-oxadiazole-2-thione (Hpot) and inorganic Co^II and Cd^II salts have been synthesized in mixed solvent media and structurally characterized by single-crystal X-ray diffraction analysis. Crystal Hpot (1) was obtained from methanol solution. Reaction of Co(NO₃)₂ · 6H₂O with Hpot afforded a neutral two-dimensional (2-D) porous coordination polymer {[Co(pot)₂] · 6H₂O}_n (2) with a (4,4) network, which shows a 3-D supramolecular network through O–H?O weak interactions. While substituting the transition metal ions used in 2 with Cd(NO₃)₂ · 6H₂O, a neutral 2-D coordination polymer [Cd₂(pot)₄]_n (3) with a (6,3) network which further extended to a 3-D supramolecular structure through versatile hydrogen bonds C–H?X (X = O, N and S) was obtained. It is remarkable that the building block “pot” anion exhibits versatile coordination modes in complexes 2 and 3. These results indicate that the versatile nature of this rigid unsymmetric ligand, together with the coordination preferences of the metal centers, plays a critical role in construction of novel coordination polymers. The properties of gas absorption, magnetism and luminescence of 2 and 3 have been investigated and discussed in detail.     

Four divalent metal thiocyanate coordination compounds containing a rigid functional pyridine ligand

A series of new coordination compounds Zn(SCN)₂L₂ (1), Co(SCN)₂L₂ (2), [Cd(SCN)₂L₂·2L]_n (3) and [CdHg(SCN)₄L₂]_n (4) have been prepared by self-assembly of a rigid functional pyridine ligand, trans-4-[4′-(N-methyl-N-hydroxyethyl)amimo]styryl pyridine (abbreviated as L) with M(SCN)_x (M: Zn, Co, Cd, CdHg; x: 2, 4). The crystal structures indicate that 1 and 2 are mononuclear compounds while 3 and 4 are coordination polymers. O–H?N, C–H?O, O–H?π and C–H?π hydrogen bonds play significant roles in the final crystal structures. The solid-state luminescence properties have been measured. The results indicate that the photoluminescence spectra of all the compounds can be changed by the frameworks and introducing of different metal ions.     

Interaction of [acacRh(CO) n ]+ ions (n=0–2) with aromatic nitro compounds in the gas phase

Summary The mass-spectrometry method has been applied to a study of the interaction of [acacRh(CO)₂]⁺ with aromatic nitro compounds in the gas phase and the reactivity order of these compounds has been determined. The coordination mechanism has been found to depend upon the nature of the nitro compound and its ability to replace carbonyl ligands increases with increasing electron-donor ability of substituents. Specific reactions leading to dissociation of C–H, N–O, and O–H bonds are discussed.     

Synthesis and structural characterization of copper–molybdenum–sulfur and copper–tungsten–sulfur cluster complexes (n-Bu4N)[OMS3Cu3Br2L2] with heterocyclic thiones as ligands

Reaction of (NH₄)₂[WOS₃] or (NH₄)₂[MoO₂S₂], n-Bu₄NBr, CuCl and Imt in acetone solvent afforded air- and moisture-stable clusters (n-Bu₄N)[MOS₃Cu₃(Imt)₂Br₂] (M = W or Mo, Imt = imidazolidine-2-thione). These compounds have been characterized by IR, UV–Vis, ¹H and ¹³C NMR spectra and single-crystal X-ray diffraction. They are crystallographically isostructural, with Imt and [MOS₃]²⁻ acting as monodentate and bidentate S-donor ligands, respectively. In the anions, the three Cu atoms have different coordination environments, one being distorted tetrahedral with Imt and Br as terminal ligands, the other two being approximately trigonal planar with Imt as a terminal ligand for one and Br as a terminal ligand for the other. W and Mo have approximately tetrahedral coordination geometry, with a terminal O and three triply-bridging S atoms. The NH groups of the Imt ligands serve as donors in intramolecular N–H?Br and in intermolecular N–H?Br and N–H?O hydrogen bonds, linking the anions to form layers with the cations in cavities.     

Bis­[3‐(salicyl­idene­amino‐O,N)propanolato]manganese(III) perchlorate

In the complex [Mn(C₁₀H₁₂NO₂)₂]ClO₄, the Mn atom lies on an inversion centre and the Cl of the perchlorate is on a twofold axis. In the cation, the Mn atom has distorted octahedral coordination with Mn—N 2.206 (3), Mn—O(phenolato) 1.871 (2) and Mn—O(propanolato) 2.300 (2) Å. In the crystal structure, the ions are linked by O—H?O hydrogen bonds [O?O 2.826 (4) Å] between the propanolato O—H group and a perchlorate O atom to form infinite chains. This is not what was proposed from a previous spectroscopic study.     

Two-dimensional supramolecular assembly of phenylmercury(II) and cadmium(II) complexes with a tridentate thiohydrazone NNS donor ligand: Synthesis,coordination behavior and crystal structure

The reaction of phenylmercury(II) acetate and cadmium(II) acetate with a refluxed solution of diacetylmonoxime and morpholine N-thiohydrazide formed a novel phenylmercury(II) complex, [PhHg(Hdammthiol)] (1) and a cadmium(II) complex, [Cd(Hdammthiol)₂] (2), respectively (where H₂dammthiol is the thiol form of diacetylmonoximemorpholine N-thiohydrazone (Hdammth) formed by the condensation of diacetylmonoxime and morpholine N-thiohydrazide in the presence of phenylmercury(II) and cadmium(II) ions). The complexes were characterised by elemental analyses and spectral data (electronic, infrared and ¹H NMR) and also by X-ray crystal structure analysis. The X-ray crystallography shows that the phenylmercury(II) complex attained a tricoordinated distorted T-shaped structure, while the cadmium(II) complex attained a trapezoidal bipyramidal geometry. The phenylmercury(II) complex forms a two-dimensional sheet via C–H?O and O–H?N hydrogen bonding and also forms a two-dimensional supramolecular dimer, having C–H?π synthons. Intermolecular C–H?O and O–H?O hydrogen bonding of the cadmium(II) complex forms a two-dimensional supramolecular sheet along the bc plane and posses an impressively short intermolecular C(sp³)?O(sp³) contact.     

Structure and magnetic properties of a double out-of-plane carboxylato-bridged Cu(II) compound with pyridine-2-carboxylate

The spectroscopic and magnetic properties, and crystal structure of dark-blue [Cu(2-pca)₂]_n (1), (2-pca = pyridine-2-carboxylate ion) are described. The copper(II) ions are in strongly tetragonally distorted octahedral environments. They are sequentially bridged by a double out-of-plane carboxylate bridge, resulting in the formation of an infinite chain (1D). The equatorial Cu–O bonds (1.957(3) Å) are significantly shorter than the axial bonds (2.737(4) Å). The crystal structure of the compound is stabilized by interchain hydrogen bonds of the C–H?O type. The intrachain copper–copper separation is 5.178(3) Å, whereas the shortest interchain copper–copper distance is 7.614(6) Å. The magnetic properties, investigated in the temperature range 1.8–300 K, revealed the occurrence of a weak intrachain antiferromagnetic coupling, J = −1.04 cm⁻¹, and an interchain exchange interaction, zJ′ = 0.34 cm⁻¹. The title compound appears to be a polymorphic form of the blue-violet compound (2) of identical stoichiometry, the X-ray structure of which was recently reported. Magneto-structural correlations in 1 have been made considering both the carboxylato bridging group and the existence of interchain hydrogen bonds. The structure and magnetic properties of 1 are compared with those of the polymorphic form 2.     

A new chromium (III) complex containing N-(2-pyridylmethyl)-2-pyrazinecarboxamide, (NPyPzCa): Synthesis,molecular and crystal structure and theoretical electron density analysis

The chromium (III) complex [Cr(NPyPzCa)Cl₂(H₂O)].(CH₃)₂O (1) (NPyPzCa stands for N-(2-pyridylmethyl)-2-pyrazinecarboxamide) has been synthesized and characterized by single crystal X-ray diffraction. The Cr(III) atom exhibits an octahedral geometry due to the coordination of three donor atoms from carboxamide ligand, two chlorine atoms and one water molecule. There is O–H?O hydrogen bonds and also π–π interactions between adjacent pyridine and ?pyrazine rings that seem to be effective in the stabilization of the crystal packing. The ?topological and energetic properties of the electron density distribution of all the metal–ligand ?bonding interactions in this complex have also been calculated and studied at ? several DFT levels. According to the results, metal–ligand bonding interactions belong (from the topological and energetic point of view) to new interactions that represent a mix of closed-shell (ionic) and shared (covalent) characters.     

Hydrogen-bonded supramolecular motifs in crystal structures of trimethoprim barbiturate monohydrate (I) and 2-amino-4,6-dimethylpyrimidinium barbiturate trihydrate (II)

In the present study, we report the crystal structures of two organic salts, namely 2,4-diamino-5-(3′,4′,5′-trimethoxybenzyl)pyrimidinium (TMP) barbiturate monohydrate (TMPBAR) (I), 2-amino-4,6-dimethylpyrimidinium (AMPY) barbiturate trihydrate (AMPYBAR) (II). In both complexes, one ring nitrogen of TMP and AMPY are protonated as a result of proton transfer from the−CH₂ group of barbituric acid. In compound (I), the TMP cation and barbiturate anion are paired through twoN−H···O and one N−H···N hydrogen bonds. This pair further self-organizes through N−H···O hydrogen bonds to generate an array of six hydrogen bonds. These arrays are further cross-linked by N−H···O hydrogen bonds forming a sheet-like structure. The water molecule is also embedded in the sheet via O−H···O and C−H···O hydrogen bonds, forming a rosette-like supramolecular motif. TMP cations are also bridged by alternating water molecules via C−H···O and O−H···N hydrogen bonds. In compound (II), the symmetrical barbiturate anions self-organize on both sides through N−H···O hydrogen bonds generating a supramolecular chain. These chains are cross-linked by the three water molecules. A pair of barbiturate anions and two water molecules constitute an array of four hydrogen bonds (DADA quadruple array). These arrays are cross-linked by another water molecule. 2-Amino-4,6-dimethylpyrimidine cations are paired through N−H···N hydrogen bonds. These pairs are bridged by three water molecules generating a supramolecular ribbon. The barbiturate chains and base pairs are arranged in an alternate manner via N−H···O and O−H···O hydrogen bonds to generate a 3-D network.     

trans-Bis(3-aminoflavone-κ2N,O)bis(perchlorato-κO)copper(II), a new potential antitumour agent

The title compound, trans-bis(3-amino-2-phenyl-4H-1-benzopyran-4-one-κ²N,O⁴)bis(perchlorato-κO)copper(II), [Cu(ClO₄)₂(C₁₅H₁₁NO₂)₂], is composed of mononuclear units wherein the central Cu^II cation occupies a crystallographic inversion centre. The cation is coordinated by two bidentate 3-aminoflavone ligands occupying the equatorial sites and by two perchlorate anions in the apical positions, thereby giving rise to a markedly elongated octahedral coordination geometry. Two symmetry-related intermolecular N—H...O hydrogen bonds link the molecules into chains of rings running parallel to the [100] direction, while intramolecular N—H...O hydrogen bonds help to determine the orientation of the apical perchlorate anions.     

A novel three‐dimensional copper(II) network via hydrogen bonds: diaquabis[bis(pyrazol‐1‐yl‐κN2)methane]copper(II) diperchlorate

The crystal structure of the title complex, [Cu(C₇H₈N₄)₂(H₂O)₂](ClO₄)₂, consists of a discrete centrosymmetric [Cu(C₇H₈N₄)₂(H₂O)₂]²⁺ cation and two perchlorate anions. The Cu^II centre is six‐coordinated by four N donors from the two pyrazole rings [Cu—N 1.998 (2) and 2.032 (3) Å] and two O atoms from the water mol­ecules occupying the apical sites [Cu—O 2.459 (3) Å]. The coordination geometry of the complex can be described as octahedral. There is a unique three‐dimensional network in which the perchlorate units are linked by a combination of strong O—H?O and weak C—H?O hydrogen bonds.     

Synthesis,characterization and X-ray crystal structures of two non-molecular coordination polymers of manganese(II) and copper(II) with <Emphasis Type="Italic">N</Emphasis>-(2-pyridylmethyl)-<Emphasis Type="SmallCaps">l</Emphasis>-alanine and isothiocyanato ligands

The reduced Schiff base, N-(2-pyridylmethyl)-l-alanine (Pyala), has been prepared and used as a ligand for the synthesis of two new non-centrosymmetrical isothiocyanate mixed-ligand coordination polymers, [MnPyalaSCN] _n and [CuPyalaSCN] _n . Pyala and the metal complexes were characterized by physico-chemical and spectroscopic methods. The single-crystal X-ray structures of the complexes reveal both compounds to be non-molecular coordination polymers which crystallize in the orthorhombic system. The ligand acts as a bridge between two metal centres in both compounds, forming two six-membered rings around each Mn atom and two five-membered rings around each Cu centre. The 1D chains are assembled via N–H?O, N–H?S hydrogen bonds and S–S interactions building 3D helical supramolecular networks in both compounds. Packing of the polymers of both compounds along the b-axis gives chiral channels.     

Bis(saccharinato)palladium(II) and platinum(II) complexes with 2,2′-bipyridine: Syntheses,structures, spectroscopic,fluorescent and thermal properties

New palladium(II) and platinum(II) complexes, cis-[Pd(bpy)(sac)₂] (1) and cis-[Pt(bpy)(sac)₂] (2), where sac = saccharinate, bpy = 2,2′-bipyridine, have been synthesized and characterized by elemental analysis, UV–Vis, IR, ¹H NMR and ¹³C NMR. The structures of the DMSO solvated complexes are determined by X-ray diffraction. Both complexes are isomorphous and the metal ions are coordinated by two N-bonded sac ligands, and two nitrogen atoms of pyridyl groups of bpy in a cis fashion. The mononuclear species interact each other through weak intermolecular C–H?O hydrogen bonds, C–H?π and π?π interactions leading to three-dimensional supramolecular networks. All complexes exhibit a high thermal stability in the solid state, and are fluorescent in the solution.     

μ‐1,4‐Benzenedicarboxylato‐bis[trans‐aqua(1,4,8,11‐tetraazacyclotetradecane)nickel(II)] diperchlorate forms a three‐dimensional hydrogen‐bonded framework

The title compound, [Ni₂(C₈H₄O₄)(C₁₀H₂₄N₄)₂(H₂O)₂](ClO₄)₂, contains two independent octahedral Ni^II centres with trans‐NiN₄O₂ chromophores. The bridging benzene­dicarboxyl­ate ligand is bonded to the two Ni atoms, each via one O atom of each carboxyl­ate, while the other O atom participates in an intramolecular N—H?O hydrogen bond, forming an S(6) motif. The cations are linked to the perchlorate anions via O—H?O and N—H?O hydrogen bonds [O?O 2.904 (6) and 2.898 (6) Å; O—H?O 158 (6) and 165 (6)°; N?O 3.175 (7) and 3.116 (7) Å; N—H?O 168 and 166°] to form molecular ladders. These ladders are linked by further O—H?O and N—H?O hydrogen bonds [O?O 2.717 (6) and 2.730 (5) Å; O—H?O 170 (4) and 163 (6)°; N?O 3.373 (7) and 3.253 (7) Å; N—H?O 163 and 167°] to form a continuous three‐dimensional framework. The perchlorate anions both participate in three hydrogen bonds, and both are thus fully ordered.