INVESTIGATION OF THE SOLUTION STRUCTURE OF Cu(II) MIXED-LIGAND COMPLEXES OF ADENOSINE 5′-MONOPHOSPHATE AND CYTIDINE 5′-MONOPHOSPHATE AND POLYAMINES

Abstract

The coordination mode of complexes formed in the systems Cu(II)/NMP/PA; (NMP =adenosine 5′-monophosphate, cytidine 5′-monophosphate; PA = 1,4-diaminopropane (putrescine, Put), 1,7-diamino-4-azaheptane (3,3-tri) and 1,11-diamino-4,8-diazaundekane (3,3,3-tet)) was determined on the basis of the equilibrium and spectroscopic studies. The presence of the following mixed complexes was established: Cu(CMP)H(Put), Cu(AMP)H₂(3,3-tri) and Cu(CMP)H₂(3,3-tri), Cu(CMP)H₄(3,3-tri) and coordination compounds of MLL′ type-Cu(CMP)(3,3,3-tet), Cu(AMP)(3,3,3-tet). A significant influence of the polyamine length on the solution structure of the complexes was observed. In mixed-ligand complexes Cu(NMP)(3,3,3-tet) a {N4, O} chromophore is formed, and metallation involves all nitrogen atoms from 3,3,3-tet. In the analogous system with 3,3-tri, protonated complexes occur. Non-covalent intramolecular interaction between the protonated amine groups and donor atoms from the purine ring from the nucleotide results in an increase of complex stability.     

Cadmium(II) and Mercury(II) Complexes in Ternary Systems with Cytidine and Diamines or Triamines

The mode of coordination of complexes formed in the systems Cd(II) or Hg(II)/cytidine/di- or triamine is proposed on the basis of equilibrium and spectroscopic studies. Mercury(II) binds much more strongly to cytidine and polyamine (PA) than cadmium. It was found from equilibrium and 13 C NMR studies that in the Hg(II) and Cd(II)/ Cyd /di- or triamine complexes, metallation mainly involves the N(3) atom of the pyrimidine base of the nucleoside and m NH x + groups from PA. In MLL' complexes of both metals with diamines, all available donor nitrogen atoms of the polyamine are involved in coordination. In analogous systems with triamines, interaction of all nitrogen atoms is observed for Cd(II) systems as well as in the Hg( Cyd )(2,3- tri ) species. Only two nitrogen atoms of the polyamine coordinate in ternary Hg(II) complexes with dien, 3,3-tri and Spd .     

Equilibrium and spectroscopic studies of ternary cadmium(II) and mercury(II) complexes with CMP and triamines

Formation of ternary Cd(II) and Hg(II) complexes with cytidine 5′-monophosphate (CMP) and triamines has been studied. Complexes M(CMP)(H _x PA) and M(CMP)(PA) (M?=?Cd, Hg; PA?=?polyamine) were detected and overall stability constants and equilibrium constants for their formation determined. The mode of coordination in the complexes has been proposed on the basis of the equilibrium and ¹³C, ³¹P NMR and IR studies. In the Hg(II) systems, metalation involves the donor endocyclic N(3) atom, the CMP phosphate group and nitrogen donor atoms of PA. Relative to the Hg/CMP binary systems, the presence of a polyamine in ternary systems does not change the metal–nucleotide mode of coordination. In ternary systems including Hg(II) ions, the occurrence of noncovalent interactions has not been detected. Cd(II) ions form molecular complexes as well as protonated species. Introduction of a polyamine to the Cd/CMP system changes the coordination mode of the nucleotide. The phosphate group of CMP is inactive in binary complexes (metalation by the N(3) atom) but is involved in coordination in heteroligand species. In contrast to other polyamines studied, in the system including 1,7-diamino-4-azaheptane (3,3-tri), the phosphate group of CMP in Cd(CMP)(H3,3-tri) does not participate in metalation but is engaged in intramolecular noncovalent interactions that stabilize the complex.     

Structural and spectroscopic investigations of the Eu–CDTA system

Two crystal structures of Eu^III complexes with CDTA (trans-1,2-diaminocyclohexane-N,N,N′,N′-tetraacetate), [C(NH₂)₃]₃[Eu₂(CDTA)₂(H₂O)₂]ClO₄ · 7H₂O (I) and [C(NH₂)₃][Eu(CDTA)(H₂O)] · 2.375H₂O (II), are presented. Both structures are polymeric and the central metal ions are eight-coordinate. The first coordination sphere of each Eu^III cation contains five carboxylate oxygen atoms, two nitrogen ones and a water molecule. For I, as well as for water solutions of the Eu^III–CDTA complex at various pH values, the spectroscopic (UV–Vis) properties were investigated.     

Synthesis,structure and spectral studies on mixed ligand copper(II) complexes of diimines and acetylacetonate

Two new mixed ligand complexes of copper(II) with acetylacetonate (acac), 2,2′-bipyridine (bpy) and 1,10-phenanthroline (phen) belonging to the class of cytotoxic and antineoplastic compounds known as CASIOPEINAS^® were synthesized and structurally characterized. Crystals of both complexes [Cu(acac)(bpy)(H₂O)]NO₃ · H₂O (1), [Cu(acac)(phen)Br] (2) contain square pyramidal Cu(II) complex species. In frozen solution both compounds give well resolved EPR spectra with very similar parameters.     

Polymeric Zn(II) and Cu(II) complexes with exobidentate bridging l-tyrosine: Synthesis,structural and spectroscopic properties

A novel zinc(II) polymeric complex of the formula {[Zn(tyr)₂(H₂O)]H₂O}_n (1) containing l-tyrosine (tyr) was prepared in the crystalline form and characterized by X-ray diffraction, NIR–Vis–UV electronic and IR–FIR vibrational spectroscopy methods. Additionally, for the [Cu(tyr)₂]_n (2) polymer, the vibrational, electronic, EPR spectroscopic and magnetic properties were studied. l-tyrosine in coordination polymers acts as a N,O-bidendate ligand and presents exobidentate bridging with a μ-carboxyl group. The μ-carboxyl exobidentate bridging coordination mode leads to a one-dimensional chain structure. The ZnN₂O₃O′ chromophore has an elongated pseudo-octahedral geometry (1), whereas the CuN₂O₂O′ (2) chromophore presents a distorted square-pyramidal environment with τ = 0.19 around the Cu²⁺ ion.     

Synthesis and crystal structure of three new copper(II) complexes with a tridentate amine and its Schiff bases

Three new mononuclear complexes of copper(II), viz. [Cu(L)(N₃)Cl] (1), [Cu(L′)(H₂O)]ClO₄ (2) and [Cu(L″)] (3) where L = N-(3-aminopropyl)-N-methylpropane-1,3-diamine, L′ = 2-(N-{3-[(3-aminopropyl)(methyl)amino]propyl}ethanimidoyl)phenolate ion and L″ = 2,2′-{(methylimino)bis[propane-3,1-diylnitrilo(1E)eth-1-yl-1-ylidene]}diphenolate ion, have been prepared. The synthesis of complex 1 has been achieved by reacting copper chloride with the triamine (L) and sodium azide in a 1:1:1 M ratio. The other two compounds have been synthesized by the reaction of copper perchlorate with the same triamine, L, plus 2-hydroxyacetophenone in a molar ratio of 1:1:1 (for 2) and 1:1:2 (for 3), so that the respective tetradentate and pentadentate Schiff bases HL′ and H₂L″ are formed in situ to bind the copper(II) ions. The complexes have been characterized by microanalytical, spectroscopic and single crystal X-ray diffraction studies. Structural studies reveal that the mononuclear units of all the three complexes adopt a distorted square pyramidal geometry and are held together by either intermolecular H-bonding (in 1 and 2) or C-H?π interactions (in 3) to form supramolecular networks in the solid state.     

Experimental and quantum-chemical studies of histamine complexes with copper(II) ion

Histamine-copper(II) complexes have been studied using experimental methods and density functional theory. Preferred coordination centres and possible structures of aqua complexes have been determined. On the basis of equilibrium and spectroscopic studies the endocyclic nitrogen atom has been confirmed to as a coordinating centre in the CuH(Hist), Cu(Hist) and Cu(Hist)(OH) complexes. The involvement of the amino group linked to the aliphatic chain in the Cu(II) coordination has been additionally proven by the detection of the Cu(Hist) and Cu(Hist)(OH) complexes. The computed stabilisation energies demonstrate that the Cu(H₂O)₄(Hist) and Cu(OH)(Hist)(H₂O)₃ chelates as well as the CuH(H₂O)₅(Hist) compounds are the most energetically stable in the media studied. The most stable conformers of the neutral form of the histamine molecule are in the Cu(Hist) and Cu(Hist)(OH) species. These complexes have a gauche structure stabilized by an intramolecular hydrogen bond. The electronic Jahn-Teller effect is mainly responsible for the tetragonal distortion of the octahedral MHL-(H₂O)₅ complex. Strong electrostatic interactions and polarisation effects contribute to the enhanced stability for all of the complexes studied. The results of the computations confirm that histamine is effective in coordinating to the Cu(II) ions in biological systems. The theoretical results fully confirm the coordination modes proposed in the experiment and predict the most reliable geometry and energetic stability of the aqua complexes.     

Temperature dependence on recrystallisation of the magnesium phthalocyanine (MgPc) in triethylamine

Three complexes of magnesium phthalocyaninato(2−) derivatives in the crystalline form, MgPc(H₂O)·(C₂H₅)₃N – (I), MgPc(H₂O)₂·2(C₂H₅)₃N – (II) and MgPc(H₂O)₂ – (III), depending on the thermal recrystallisation conditions were obtained and structurally characterised. In complex I, the Mg center exhibits square-pyramidal (4 + 1) coordination environment, whereas in II and III the Mg center of MgPc the biaxial (4 + 2) coordination. Owing to the interaction of the positively charged Mg center with oppositely charged oxygen atom of water molecule in an axial position in I, the Mg atom is significantly displaced (0.451(2) Å) from the plane defined by four isoindole N atoms and leads to distortion of the planar Pc(2−) macrocycle to the saucer-shape form. In II and III due to the biaxial (4 + 2) coordination of the Mg center of MgPc, the Mg atom lies on a N₄-isoindole plane. The triethylamine solvent molecules in I and II interact with mono or bis(aqua)magnesium phthalocyanine via   O–H?$?$N hydrogen bonds. The axial Mg–O bond in I is significantly shorter than that in the II and III complexes. The strength of the Mg–O bond in these complexes is correlated with their thermal stability. From among the complexes only complex I exhibits an intense near-IR absorption band in the solid-state. The spectra of I, II and III in solution are very similar.     

Weak ferromagnetism in 1D coordination polymers: Syntheses,crystal structures,spectroscopic and magnetic properties of [Cu(L)(Memal)]n (Memal = the dianion of methylmalonic acid,L = 1,10-phenanthroline, 2,2′-bipyridine)

Investigation of the CuCl₂/H₂Memal/L (H₂Memal = methylmalonic acid, L = 1,10-phenanthroline or 2,2′-bipyridine) reaction system in MeOH and various molar ratios has lead to the isolation of two one-dimensional coordination polymers presenting the [Cu(L)(Memal)] repeating unit (1, L = 1,10-phen; 2, L = 2,2′-bpy). The Memal²⁻ ligand adopts the bidentate [chelating] + unidentate coordination mode between the Cu^II ions. Magnetic susceptibility measurements on 1 and 2 indicated the existence of weak ferromagnetic intrachain interactions and X-band EPR spectra from powdered samples of 1 and 2 are consistent with the stereochemistry of the Cu^II ions and with the presence of weak exchange interactions.     

Mixed-ligand ternary complexes of potentially pentadentate but functionally tridentate Schiff base chelates

The potentially pentadentate chelate 2,6-diacetylpyridine-bis(N-methyl-S-methyldithiocarbazate) (Nmedapsme) has been synthesized and structurally characterized by X-ray diffraction. Its reactions with nickel(II) salts did not lead to pentadentate coordinated ligand complexes but ternary complexes of general formula, [Ni(Nmedapsme)(nmesme)L]X·H₂O (L = Br⁻, I⁻; X = I⁻, BF₄⁻) where Nmedapsme binds as a tridentate and nmesme = N-methyl-S-methyldithiocarbazate. The related ternary nickel(II) complexes of formula, Ni(Nmedapsme)(nmetsc)Br₂ has also been prepared and characterized. X-ray crystal structures of [Ni(Nmedapsme)(nmesme)I]I·H₂O and [Ni(Nmedapsme)(nmesme)Br]BF₄·H₂O revealed that, in these complexes, the Nmedapsme ligand acts as a tridentate NNN donor while the distal S-donors are not coordinated. The bidentate (NS) ligand, nmesme coordinates to the nickel(II) ion via the amino nitrogen and the thione sulfur atoms, the sixth coordination site is occupied by an anion. In both complexes, the nickel(II) ion adopts a distorted octahedral configuration. The complex [Cu(nmesme)₂(ONO₂)]NO₃ was obtained from an unsuccessful attempt to complex copper(II) with Nmedapsme. Hydrolysis of the parent Schiff base Nmedapsme occurred during complexation. An X-ray crystallographic structure analysis shows that the complex, [Cu(nmesme)₂(ONO₂)]NO₃ has an approximately square-pyramidal geometry with the two nmesme ligands coordinated to the copper(II) ion as NS bidentate chelating agents via the amino nitrogen and thione sulfur atoms and the fifth coordination position of copper(II) is occupied by a monodentate nitrate ligand.     

Ru(II)–DMSO complexes containing aromatic and heterocyclic acid hydrazides: Structure,electrochemistry and biological activity

The reaction of cis-[RuCl₂(DMSO)₄] with a family of aromatic and heterocyclic acid hydrazides yielded new complexes of the general formula trans-[RuCl₂(DMSO)₂(hydrazide)] · nH₂O (n = 0; 1–6; n = 1; 7). The new complexes have been characterized by IR, UV–Vis and ¹H NMR spectroscopic methods. In addition, the structure of one of the complexes, [RuCl₂(DMSO)₂(tcah)] · H₂O (tcah = thiophene-2-carboxylic acid hydrazide), has been determined by single crystal X-ray diffraction. All the studies reveal the neutral bidentate coordination of the hydrazide ligands through the acyl oxygen and amine nitrogen atoms. The electron transfer properties of the complexes were studied by cyclic voltammetry and all the complexes except one show an irreversible/quasi-reversible reduction wave (Ru^II/Ru^I) and an uncoupled oxidation peak (Ru^III/ Ru^II). The preliminary DNA-binding ability of the complexes, studied with herring sperm DNA, shows the binding of the complexes with DNA with a lesser affinity than classical intercalators. The complexes have also been screened for their antibacterial activity against five pathogenic bacteria.     

Synthesis,crystal structure and thermal analysis of supramolecular architectures of copper(II)(2,2′-biimidazole) complexes using dicarboxylate as a coligand

Two new copper(II) complexes {[Cu(H₂biim)(H₂O)(suc)](H₂O)}_n (1) and {[Cu(H₂biim)₂(H₂O)][Cu(H₂biim)₂(glut)](glutH)(NO₃) · 2.5H₂O}_n (2) (H₂biim, 2,2′-biimidazole; suc, succinate dianion; glut, glutarate dianion) have been synthesized and characterized by single crystal X-ray diffraction study and thermal analysis. Complex 1 comprises of 1D zigzag coordination polymers, elongated along the crystallographic b-axis, connected through H-bonding and face-to-face π–π interactions to form a robust 3D network. Whereas complex 2 is built up of bischelated [Cu(II)(H₂biim)₂]²⁺ units, glutarate and nitrate anions and water molecules, held together through an extensive H-bonded system. The resulting 3D supramolecular architecture defines channels which are filled by lattice water molecules and disordered nitrate anions.     

Copper(I) complexes of a thioether-functionalized short-bite aminobis(phosphonite), [PhN{P(–OC10H6(μ-S)C10H6O–)}2]

Copper(I) complexes of short-bite aminobis(phosphonite), PhN{P(–OC₁₀H₆(μ-S)C₁₀H₆O–)}₂ (1) have been synthesized. Reactions of 1 with an excess of CuX (X = Cl, Br, and I) afforded the ligand-bridged binuclear complexes, [PhN(PR-κP)₂{Cu(μ-X)(MeCN)}₂] (2, X = Cl; 3, X = Br; 4, X = I; R = –OC₁₀H₆(μ-S)C₁₀H₆O–), whereas treatment with 0.5 equiv. of [Cu(MeCN)₄]PF₆ produces the mononuclear bischelated cationic complex, [{PhN(PR-κP)₂}₂Cu](PF₆) (5). Single crystal X-ray structures of complexes 3 and 4 are reported. Complex 3 shows strong π–π stacking interactions between the naphthyl moieties, whereas complex 4 shows ligand-supported Cu?Cu metallophilic interactions.     

Hetero-metallic frameworks of [Pd(CN)4] and Cu(II) with triamines: A rare example of a tetracyanometallate bridged 2D coordination polymer

Four cyano bridged Cu(II)–Pd(II) heterometallic complexes, [Cu(dpt)Pd(CN)₄]_n (1), {[Cu₂(medpt)₂Pd(CN)₄](ClO₄)₂ · 3H₂O}_n (2), {[Cu₂(dien)₂Pd(CN)₄](ClO₄)₂ · 2CH₃OH}_n (3) and {[Cu₂(iPrdien)₂Pd(CN)₄](ClO₄)₂ · 2H₂O}_n (4) [dpt = 3,3′-iminobispropylamine; medpt = 3,3′-diamino-N-methyldipropylamine; dien = diethylenetriamine and iprdien = N′-isopropyldiethylenetriamine] have been synthesized and characterized by single crystal X-ray diffraction analysis, magnetic measurement and thermal study. Complexes 1, 2 and 3 are 1D coordination polymers, while 4 presents a 2D network. In 1, the cis-directed cyanide ligands of [Pd(CN)₄]²⁻ anions link two Cu(dpt) units to form a neutral coordination polymer, whereas in 2, 3 and 4, all the cyanide groups of [Pd(CN)₄]²⁻ take part in bonding with four adjacent Cu(II) ions, resulting in cationic coordination polymers counterbalanced by perchlorate anions. The structures are compared with those of analogous [Ni(CN)₄]²⁻ derivatives. The magnetic behavior shows antiferromagnetic interactions in all the complexes.     

Revision of iron(III)–citrate speciation in aqueous solution. Voltammetric and spectrophotometric studies

A detailed study of iron (III)–citrate speciation in aqueous solution (θ = 25 °C, I_c = 0.7 mol L⁻¹) was carried out by voltammetric and UV–vis spectrophotometric measurements and the obtained data were used for reconciled characterization of iron (III)–citrate complexes. Four different redox processes were registered in the voltammograms: at 0.1 V (pH = 5.5) which corresponded to the reduction of iron(III)–monocitrate species (Fe:cit = 1:1), at about −0.1 V (pH = 5.5) that was related to the reduction of FeL₂⁵⁻, FeL₂H⁴⁻ and FeL₂H₂³⁻ complexes, at −0.28 V (pH = 5.5) which corresponded to the reduction of polynuclear iron(III)–citrate complex(es), and at −0.4 V (pH = 7.5) which was probably a consequence of Fe(cit)₂(OH)_x species reduction. Reversible redox process at −0.1 V allowed for the determination of iron(III)–citrate species and their stability constants by analyzing E_p vs. pH and E_p vs. [L⁴⁻] dependence. The UV–vis spectra recorded at varied pH revealed four different spectrally active species: FeLH (log β = 25.69), FeL₂H₂³⁻ (log β = 48.06), FeL₂H⁴⁻ (log β = 44.60), and FeL₂⁵⁻ (log β = 38.85). The stability constants obtained by spectrophotometry were in agreement with those determined electrochemically. The UV–vis spectra recorded at various citrate concentrations (pH = 2.0) supported the results of spectrophotometric–potentiometric titration.     

Transition metal complexes of N,N-dimethylthreonine: Stability and UV/Vis spectra

Summary Acidity (dehydronation) constants of N,N-dimethylthreonine (DMT) and stability constants of its complexes with Cu⁺², Ni⁺², and Co⁺² were determined in aqueous solution by means of potentiometric titration. UV/Vis spectra were also taken during the titration. It is suggested thatDMT acts as a bidentate ligand toward copper(II) by engaging either (a) amino and carboxyl groups (in [Cu(DMT)] and [Cu(DMT)₂]), or, (b) upon dehydronation, amino and hydroxyl groups (in [Cu(DMT)H_–1], [Cu(DMT)₂H_–1], and [Cu(DMT)₂H_–2]). It is suggested that the coordination in threoninato andallo-threoninato complexes is similar to that described under (a).Based upon Master of Science thesis submitted to the University of Zagreb, Croatia byB. Blagovi     

Synthesis,crystal, molecular and electronic structures of thiocyanate hydrido-carbonyl ruthenium(II) complexes with imidazole derivatives ligands

[RuH(CO)(SCN)(PPh₃)₃] and [RuH(CO){SCN}(PPh₃)₂(L)]{SCN} complexes (where L = benzimidazole, 2-(2-pyridyl)benzimidazole and 2,2′-bis(4,5-dimethylimidazolyl)) have been prepared and studied by IR, NMR, UV–Vis spectroscopy and X-ray crystallography. Electronic structures and bonding of the obtained complexes were defined on the basis of DFT method. Values of the ligand field parameter 10Dq and Racah’s parameters were estimated for the studied compounds, and the luminescence properties were determined.     

Investigation on coordination modes of organotin(IV) complexes with 6-thiopurine and related ligands

The organotin(IV) complexes R₂Sn(tpu)₂ · L [L = 2MeOH, R = Me (1); L = 0: R = n-Bu (2), Ph (3), PhCH₂ (4)], R₃Sn(Hthpu) [R = Me (5), n-Bu (6), Ph (7), PhCH₂ (8)] and (R₂SnCl)₂ (dtpu) · L [L = H₂O, R = Me (9); L = 0: R = n-Bu (10), Ph (11), PhCH₂ (12)] have been synthesized, where tpu, Hthpu and dtpu are the anions of 6-thiopurine (Htpu), 2-thio-6-hydroxypurine (H₂thpu) and 2,6-dithiopurine (H₂dtpu), respectively. All the complexes 1-12 have been characterized by elemental, IR, ¹H, ¹³C and ¹¹⁹Sn NMR spectra analyses. And complexes 1, 2, 7 and 9 have also been determined by X-ray crystallography, complexes 1 and 2 are both six-coordinated with R₂Sn coordinated to the thiol/thione S and heterocyclic N atoms but the coordination modes differed. As for complex 7 and 9, the geometries of Sn atoms are distorted trigonal bipyramidal. Moreover, the packing of complexes 1, 2, 7 and 9 are stabilized by the hydrogen bonding and weak interactions.