Fat suppression with an improved selective presaturation pulse.

Chemical shift selective (CHESS) imaging is an efficient and easily implemented technique for suppression of the fat component in clinical images. A Gaussian pulse is widely used as the selective presaturation pulse in the CHESS technique. However, a Gaussian pulse hardly performs well even if the magnetic field is very carefully shimmed. In clinical applications, the fat and water peaks are always inhomogeneously broadened. We have analyzed the performance of the Gaussian pulse in the presence of magnetic field inhomogeneities and present a more efficient selective presaturation pulse developed by applying the conjugate gradient method. The resulting pulse performs well without any requirement for magnetic field homogeneity greater than needed for routine diagnostic MR imaging.     

Spectrally-Presaturated Modulation (SPM): An efficient fat suppression technique for STEAM-based cardiac imaging sequences

Stimulated-echo acquisition mode (STEAM) is a key pulse sequences in MRI in general, and in cardiac imaging in particular. Fat suppression is an important feature in cardiac imaging to improve visualization and eliminate off-resonance and chemical-shift artifacts. Nevertheless, fat suppression comes at the expense of reduced temporal resolution and signal-to-noise ratio (SNR). The purpose of this study is to develop an efficient fat suppression method (Spectrally-Presaturated Modulation) for STEAM-based sequences to enable imaging with high temporal-resolution, high SNR, and no increase in scan time. The developed method is based on saturating the fat magnetization prior to applying STEAM modulation; therefore, only the water-content of the tissues is modulated by the sequence, resulting in fat-suppressed images without the need to run the fat suppression module during image acquisition. The potential significance of the proposed method is presented in two STEAM-based cardiac MRI applications: complementary spatial-modulation of magnetization (CSPAMM), and black-blood cine imaging. Phantom and in vivo experiments are conducted to evaluate the developed technique and compare it to the commonly implemented chemical-shift selective (CHESS) and water-excitation using spectral-spatial selective pulses (SSSP) fat suppression techniques. The results from the phantom and in vivo experiments show superior performance of the proposed method compared to the CHESS and SSSP techniques in terms of temporal resolution and SNR. In conclusion, the developed fat suppression technique results in enhanced image quality of STEAM-based images, especially in cardiac applications, where high temporal-resolution is imperative for accurate measurement of functional parameters and improved performance of image analysis algorithms.     

A post-processing method for correction and enhancement of chemical shift images

Chemical shift imaging (CSI) relies on a strong and homogeneous main field. Field homogeneity ensures adequate coherence between the precessions of individual spins within each voxel. Variation of field strength between different voxels causes geometric distortion and intensity variation in chemical shift images, resulting in errors when analyzing the spatial distribution of specific chemical compounds. A post-processing method, based on detection of the spectral peak of water and baseline subtraction with Lorentzian functions, was developed in this study to automatically correct spectra offsets caused by field inhomogeneity, thus enhancing the contrast of the chemical shift images. Because this method does not require prior field plot information, it offers advantages over existing correction methods. Furthermore, the method significantly reduces geometric distortion and enhances signals of chemical compounds even when the water suppression protocol was applied during the CSI data acquisition. The experimental results of the water and glucose phantoms showed a considerable reduction of artifacts in the spectroscopic images when this post-processing method was employed. The significance of this method was also demonstrated by an analysis of the spatial distributions of sugar and water contents in ripe and unripe bananas.     

Frequency-Selective Fat Suppression Radiofrequency Pulse Train to Remove Olefinic Fats

CHESS pulse can suppress the signal originating from aliphatic fat protons but cannot suppress the signal from olefinic fat protons, which is near the resonance frequency of water protons. Adipose tissue contains various fat species; aliphatic fat comprises about 90 % and olefinic fat about 10 % of adipose tissue. Thus, CHESS pulse cannot be used to suppress the signal from adipose tissue completely. The purpose of this study was to find a method to suppress the signal from adipose tissue completely. The Fatsat train pulse, created with an arbitrary flip angle and insensitive to B1 inhomogeneity, was used. Because B1 inhomogeneity is larger on higher field magnetic resonance imaging, the fat suppression radiofrequency pulse needs to be B1-insensitive. To investigate a percentage of olefinic fat in adipose tissues, the excitation frequency of the Fatsat train pulse was varied from ?240 to +400 Hz and the images and fat-suppressed images were obtained. The presence of olefinic fat comprising about 10 % of abdominal adipose tissue was identified. The result agreed with some previous papers. Complete fat suppression could be achieved by partial (10 %) inversion of longitudinal aliphatic fat magnetization and by canceling out the two fat magnetizations. The flip angle was identified to about 95°. In conclusion, the cause that the signal from adipose tissues cannot be suppressed completely has been found. Improved images that signals from adipose tissues were suppressed completely have been demonstrated. This technique can also be applied to several pulse sequences.     

Diffusion Measurement in Phantoms and Tissues Using SLIM Localization

A new approach to efficient localized diffusion measurements has been developed and evaluated on phantoms and isolated tissues. The combination of a diffusion-sensitive pulse sequence with SLIM (spectral localization by imaging) makes efficient and accurate localized water and metabolite diffusion measurements possible with a substantial improvement in spatial or time resolution compared to standard methods. Phantom experiments showed that diffusion of substances present in relatively low concentration within small compartments can be measured accurately by this method, suggesting potential applications for diffusion measurements of metabolitesin vivo.Experiments on excised rat uterine horns demonstrated the ability of this method to measure localized diffusion of water within irregularly shaped regions of biological samples. Accurate diffusion measurements were achieved in the localized regions with acquisition times less than would have been required by standard diffusion imaging methods.     

Fast fat-suppressed reduced field-of-view temperature mapping using 2DRF excitation pulses

The purpose of this study is to develop a fast and accurate temperature mapping method capable of both fat suppression and reduced field-of-view (rFOV) imaging, using a two-dimensional spatially-selective RF (2DRF) pulse. Temperature measurement errors caused by fat signals were assessed, through simulations. An 11×1140μs echo-planar 2DRF pulse was developed and incorporated into a gradient-echo sequence. Temperature measurements were obtained during focused ultrasound (FUS) heating of a fat-water phantom. Experiments both with and without the use of a 2DRF pulse were performed at 3T, and the accuracy of the resulting temperature measurements were compared over a range of TE values. Significant inconsistencies in terms of measured temperature values were observed when using a regular slice-selective RF excitation pulse. In contrast, the proposed 2DRF excitation pulse suppressed fat signals by more than 90%, allowing good temperature consistency regardless of TE settings. Temporal resolution was also improved, from 12 frames per minute (fpm) with the regular pulse to 28 frames per minute with the rFOV excitation. This technique appears promising toward the MR monitoring of temperature in moving adipose organs, during thermal therapies.     

Pulse-amplitude equalization by negative impulse modulation for rational harmonic mode locking

We propose a novel technique based on negative impulse modulation for pulse repetition rate multiplication by rational harmonic mode locking with pulse-amplitude-equalized pulses directly from the laser cavity. We have generated a pulse train of 15 GHz with more than 16 dB suppression of unwanted amplitude modulation spurs by using a 1 GHz RF signal. This is the highest suppression ratio for a repetition rate multiplication factor of 15 to our knowledge.     

Velocity selective radiofrequency pulse trains

The incorporation of velocity-encoding gradient pulses in RF-pulse trains is proposed and examined. Velocity selective perturbation is shown to be analogous in many respects to the well established use of trains of short RF-pulses for chemical shift selective perturbation. Velocity selective perturbation is viable in a biomedical setting only if additional RF refocusing pulses are inserted between the individual RF-pulse elements. Aspects of velocity selective excitation saturation and inversion are examined, and new inversion pulse trains proposed. The selective perturbation of both flowing and stationary spins is demonstrated in phantoms and possible biomedical applications of these pulse trains are discussed.     

Design and optimization for variable rate selective excitation using an analytic RF scaling function

At higher B(0) fields, specific absorption rate (SAR) deposition increases. Due to maximum SAR limitation, slice coverage decreases and/or scan time increases. Conventional selective RF pulses are played out in conjunction with a time independent field gradient. Variable rate selective excitation (VERSE) is a technique that modifies the original RF and gradient waveforms such that slice profile is unchanged. The drawback is that the slice profile for off-resonance spins is distorted. A new VERSE algorithm based on modeling the scaled waveforms as a Fermi function is introduced. It ensures that system related constraints of maximum gradient amplitude and slew rate are not exceeded. The algorithm can be used to preserve the original RF pulse duration while minimizing SAR and peak b1 or to minimize the RF pulse duration. The design is general and can be applied to any symmetrical or asymmetrical RF waveform. The algorithm is demonstrated by using it to (a) minimize the SAR of a linear phase RF pulse, (b) minimize SAR of a hyperbolic secant RF pulse, and (c) minimize the duration of a linear phase RF pulse. Images with a T1-FLAIR (T1 FLuid Attenuated Inversion Recovery) sequence using a conventional and VERSE adiabatic inversion RF pulse are presented. Comparison of images and scan parameters for different anatomies and coils shows increased scan coverage and decreased SAR with the VERSE inversion RF pulse, while image quality is preserved.     

Fat-water selective excitation in balanced steady-state free precession using short spatial-spectral RF pulses

Fat suppression is important but challenging in balanced steady-state free precession (bSSFP) acquisitions, for a number of clinical applications. In the present work, the practicality of performing fat-water selective excitations using spatial-spectral (SPSP) RF pulses in bSSFP sequence is examined. With careful pulse design, the overall duration of these SPSP pulses was kept short to minimize detrimental effects on TR, scan time and banding artifact content. Fat-water selective excitation using SPSP pulses was demonstrated in both phantom and human bSSFP imaging at 3T, and compared to results obtained using a two-point Dixon method. The sequence with SPSP pulses performed better than the two-point Dixon method, in terms of scan time and suppression performance. Overall, it is concluded here that SPSP RF pulses do represent a viable option for fat-suppressed bSSFP imaging.     

A novel power spectrum calculation method using phase-compensation and weighted averaging for the estimation of ultrasound attenuation

An estimation of ultrasound attenuation in soft tissues is critical in the quantitative ultrasound analysis since it is not only related to the estimations of other ultrasound parameters, such as speed of sound, integrated scatterers, or scatterer size, but also provides pathological information of the scanned tissue. However, estimation performances of ultrasound attenuation are intimately tied to the accurate extraction of spectral information from the backscattered radiofrequency (RF) signals. In this paper, we propose two novel techniques for calculating a block power spectrum from the backscattered ultrasound signals. These are based on the phase-compensation of each RF segment using the normalized cross-correlation to minimize estimation errors due to phase variations, and the weighted averaging technique to maximize the signal-to-noise ratio (SNR). The simulation results with uniform numerical phantoms demonstrate that the proposed method estimates local attenuation coefficients within 1.57% of the actual values while the conventional methods estimate those within 2.96%. The proposed method is especially effective when we deal with the signal reflected from the deeper depth where the SNR level is lower or when the gated window contains a small number of signal samples. Experimental results, performed at 5 MHz, were obtained with a one-dimensional 128 elements array, using the tissue-mimicking phantoms also show that the proposed method provides better estimation results (within 3.04% of the actual value) with smaller estimation variances compared to the conventional methods (within 5.93%) for all cases considered.     

Time and frequency parameters of bottlenose dolphin whistles as predictors of surface behavior in the Mississippi Sound

In this study, an algorithm previously developed for estimating the total ultrasonic attenuation along the propagation path from the surface of the transducer to a region of interest (ROI) in tissue, was modified to make it more practical for use in clinical settings. Specifically, the algorithm was re-derived for when a tissue mimicking phantom rather than a planar reflector is used to obtain the reference power spectrum. The reference power spectrum is needed to compensate for the transfer function of the transmitted pulse, the transfer function of transducer, and the diffraction effects that result from focusing/beam forming. The modified algorithm was tested on simulated radio frequency (RF) echo lines obtained from two samples that have different scatterer sizes and different attenuation coefficient slopes, one of which was used as a reference. The mean and standard deviation of the percent errors in the attenuation coefficient estimates (ACEs) were less than 5% and 10%, respectively, for ROIs that contain more than 10 pulse lengths and more than 25 independent echo lines. The proposed algorithm was also tested on two tissue mimicking phantoms that have attenuation coefficient slopes of 0.7 dB/cm-MHz and 0.5 dB/cm-MHz respectively, the latter being the reference phantom. When a single element spherically focused source was used, the mean and standard deviation of the percent errors in the ACEs were less than 5% and 10% respectively for windows that contain more than 10 pulse lengths and more than 17 independent echo lines. When a clinical array transducer was used, the mean and standard deviation of the percent errors in the ACEs were less than 5% and 25%, respectively, for windows that contain more than 12 pulse lengths and more than 45 independent echo lines.     

Suppression of spectral interferences due to water-vapor rotational transitions in terahertz time-domain spectroscopy

Absorption lines of atmospheric water vapor are commonly present in terahertz spectra measured in ambient air. These spectral interferences are caused by the rotational transitions of water molecules. In this study, we develop an effective method for suppression of the water-vapor effects by modeling the absorption lines using Lorentzian line shape and spectroscopic parameters extracted from the HITRAN database and then subtracting them iteratively in the frequency domain. The free-space terahertz pulse and the absorbance spectrum of an explosive material are restored successfully in the experimental verification.     

Optimization of the Water-PRESS Pulse Sequence and Its Integration into Pulse Sequences for Studying Biological Macromolecules

In this paper, the recently developed “Water-PRESS” method of water suppression [W. S. Price and Y. Arata (1996),J. Magn. Reson. B112,190] in which homospoil pulses are used to manipulate the effects of radiation damping on the water resonance and thereby selectively alter the effective relaxation times of the water resonance with respect to the solute (e.g., biological macromolecules) resonances is further developed and applied. In the present work, methods for optimization in terms of degree of water suppression and in temporal terms (important for the application of Water-PRESS to multidimensional experiments) are considered so that recycle delays of less than 2.3 s (including the acquisition time) are possible. Also, a simple modification which allows the observation of solute resonances with relaxation times similar to that of the water resonance is presented. Finally, the inclusion into more complicated pulse sequences is also discussed. Experimental examples using aqueous samples of lysozyme and immunoglobulin are given. Compared to most other NMR water suppression techniques, this method is extremely simple to implement and optimize and does not require accurately calibrated RF pulses or perfect lineshape.     

Investigation of the effect of a variety of pulse errors on spin I=1 quadrupolar alignment echo spectroscopy

We report on an analysis of a well known three-pulse sequence for generating and detecting spin I=1 quadrupolar order when various pulse errors are taken into account. In the situation of a single quadrupolar frequency, such as the case found in a single crystal, we studied the potential leakage of single and/or double quantum coherence when a pulse flip error, finite pulse width effect, RF transient or a resonance offset is present. Our analysis demonstrates that the four-step phase cycling scheme studied is robust in suppressing unwanted double and single quantum coherence as well as Zeeman order that arise from the experimental artifacts, allowing for an unbiased measurement of the quadrupolar alignment relaxation time, T(1Q). This work also reports on distortions in quadrupolar alignment echo spectra in the presence of experimental artifacts in the situation of a powdered sample, by simulation. Using our simulation tool, it is demonstrated that the spectral distortions associated with the pulse artifacts may be minimized, to some extent, by optimally choosing the time between the first two pulses. We highlight experimental results acquired on perdeuterated hexamethylbenzene and polyethylene that demonstrate the efficacy of the phase cycling scheme for suppressing unwanted quantum coherence when measuring T(1Q). It is suggested that one employ two separate pulse sequences when measuring T(1Q) to properly analyze the short time behavior of quadrupolar alignment relaxation data.     

Hyperspectral image fusion based on sparse constraint NMF

The spatial resolution of hyperspectral image is often low due to the limitation of the imaging spectrometer. Fusing the original hyperspectral image with high-spatial-resolution panchromatic image is an effective approach to enhance the resolution of hyperspectral image. However, it is hard to preserve the spectral information at the same time of enhancing the resolution by the traditional fusion methods. In this paper, we proposed a fusion method based on the spectral unmixing model called sparse constraint nonnegative matrix factorization (SCNMF). This method has a superior balance of the spectral preservation and the spatial enhancement over some traditional fusion methods. In addition, the added sparse prior and NMF based unmixing model make the fusion more stable and physically reasonable. This method first decomposes the hyperspectral image into an endmember-matrix and an abundance-matrix, then sharpens the abundance-matrix with the panchromatic image, finally obtains the fused image by solving the spectral constraint optimization problem. The experiments on both synthetic and real data show the effectiveness of the proposed method.     

SOGGY: solvent-optimized double gradient spectroscopy for water suppression. A comparison with some existing techniques

Excitation sculpting, a general method to suppress unwanted magnetization while controlling the phase of the retained signal [T.L. Hwang, A.J. Shaka, Water suppression that works. Excitation sculpting using arbitrary waveforms and pulsed field gradients, J. Magn. Reson. Ser. A 112 (1995) 275-279] is a highly effective method of water suppression for both biological and small molecule NMR spectroscopy. In excitation sculpting, a double pulsed field gradient spin echo forms the core of the sequence and pairing a low-power soft 180 degrees (-x) pulse with a high-power 180 degrees (x) all resonances except the water are flipped and retained, while the water peak is attenuated. By replacing the hard 180 degrees pulse in the double echo with a new phase-alternating composite pulse, broadband and adjustable excitation of large bandwidths with simultaneous high water suppression is obtained. This "Solvent-Optimized Gradient-Gradient Spectroscopy" (SOGGY) sequence is a reliable workhorse method for a wide range of practical situations in NMR spectroscopy, optimizing both solute sensitivity and water suppression.     

基于特征约束的谱线自动提取

已有的谱线自动提取方法均采用整体阈值约束或局部阈值约束进行谱线识别,因而谱线提取结果中普遍存在谱线遗失或伪谱线过多的缺点。文章在谱线识别时加入了2个特征约束,第1个特征约束是： 谱线线心的强度必须大于局部阈值和整体下阈值,并且如果某一点的强度大于整体上阈值,则可认为在该点存在谱线;第2个特征约束是： 谱线的起始波长和终止波长处的强度必须小于谱线线心的强度。这2个特征约束使得该文的谱线提取效果较之已有方法有显著的提高。通过实验对该文方法和已有的方法进行了比较,实验结果充分体现了该文方法的优势。     

Cascaded z-filters for efficient single-scan suppression of zero-quantum coherence

A simple and robust method to suppress zero-quantum coherence (ZQC) in NMR experiments, in a single scan and with very high suppression ratio, is described. It is an appreciable improvement on a previous technique by Thrippleton and Keeler [Angew. Chem. Int. Ed. 42 (2003) 3938]. The method, called a z-filter cascade, preserves longitudinal, or z-magnetization, with high efficiency. Losses depend mostly on T1 relaxation but not T2 relaxation mechanisms. At the same time, suppression of ZQC can be essentially complete in a single scan. The time duration of the z-filter cascade scales inversely to representative chemical shift differences between the coupled spins, and is typically a few tens of milliseconds. The high efficiency of the zero-quantum suppression and excellent retention of the desired z-magnetization, in a single scan without resort to phase cycling or difference spectroscopy, makes the z-filter cascade a useful new pulse sequence building block for a whole range of NMR experiments. In cases where unwanted residual ZQC may have previously contributed to baseline " t1-noise" in two-dimensional NMR spectra, the z-filter cascade can deliver a noteworthy improvement in spectral quality.     

Low-power water suppression by hyperbolic secant pulses with controlled offsets and delays (WASHCODE)

A class of chemical-shift-selective (CHESS) water suppression (WS) schemes is presented in which the characteristic frequency-domain excitation profiles of "adiabatic" full-passage (AFP) RF pulses are utilized for frequency-selective excitation of the water resonance. In the proposed WS schemes, dubbed WASHCODE, hyperbolic secant (HS) pulses were used as the AFP pulses. Besides the high immunity of WS efficiency toward B(1) inhomogeneity, these sequences also exhibit extraordinary insensitivity to the dispersion of the water T(1) relaxation times. The actual performance of the proposed WS schemes was achieved in particular by optimizing the frequency offsets of WS HS pulses and the time intervals between them. To reduce the RF power requirements of these WS sequences for in vivo applications, HS pulses with the minimum possible frequency bandwidths were employed, which also substantially reduced the adverse effects on the observed proton MR spectra. The proposed WS schemes were evaluated by simulations based on the Bloch equations. Several WS sequences which looked particularly promising were verified experimentally on the human brain on a 3 T MR scanner using very short echo-time STEAM for volume selection and a standard single-loop surface coil for both signal transmission and reception. Routinely, water-suppression factors ranging from 2000 to 4000 were achieved in vivo without additional adjustment of parameters for individual subjects and without violating legal safety limits.