Vanadium levels in marine organisms of Onagawa Bay in Japan

Vanadium in marine organisms from Onagawa Bay in Miyagi, Japan, was determined by an instrumental neutron activation analysis (INAA) method using anti-coincidence gamma-ray spectrometry at the Dalhousie University SLOWPOKE-2 Reactor (DUSR) facility in Canada. Seaweeds, cultivated oysters, plankton, and four different species of sea squirt were collected from Onagawa Bay during 2005–2008. Vanadium levels around 20 μg g⁻¹ (dry weight) were found in Japanese tangle and hijiki seaweeds. One species of sea squirt (Ciona savignyi) contained 160–500 ppm of V and it was highest among the four species of sea squirts studied. Protein-bound V species were separated by gel permeation chromatography (GPC) and the element determined by inductively coupled plasma atomic emission spectrometry (ICP-AES).     

Molecularly Imprinted Polymer for Solid‐Phase Extraction of Ecteinascidin 743 from Sea Squirt

Ecteinascidin 743 from sea squirt is one of the most original anti‐tumoral activity compounds, as proven by the Natural Cancer Institute. Ecteinascidin 743 could be obtained with traditional liquid extraction, but it should be purified and separated from the extract. A molecularly imprinted solid‐phase extraction procedure was developed for the selective separation. Ecteinascidin 743 was used as the template and the polymer was synthesized in a methanol environment. Water and n‐hexane as the washing solvents can eliminate most of the interference. Good linearity and low relative standard deviations (less than 4.39%) justify its continuing development.     

The potent anticancer compound ecteinascidin‐743 (ET‐743) as its 2‐propanol disolvate

Single crystals of the title compound, C₃₉H₄₃N₃O₁₁S·2C₃H₈O, have been obtained from 2‐propanol/water solutions. ET‐743 belongs to the group of ecteinascidins (ETs), which is a family of novel marine tetra­hydro­iso­quinoline derivatives characterized by a monobridged pentacyclic skeleton. Three large princi­pal planar groups are observed in the three‐dimensional structure of the ET‐743 mol­ecule, corresponding to three aromatic units which are nearly perpendicular to each other. In the crystal, the methoxy group on the large fused ring system adopts an anti conformation with respect to the S atom, thus presenting the same conformation as that found in solution.     

Isolation of a bacterium from mangrove soil for degradation of sea sludge

Sea sludge, which is sediment of fish excrement and sewage on the sea bottom, continues to be a serious environmental problem. It has the potential to cause eutrophication and red tide, resulting in the death of shellfish and leading to an offensive odor. Soil taken from a mangrove swamp was added to sea sludge, which promoted an initial fermentation of the sludge components. This article reports on the isolation of a bacterium from mangrove soil that is involved in that fermentation. Three bacteria were isolated on a marine agar plate after incubating for 12 h at 60°C. One of these bacteria fermented sea sludge. 16S rDNA of this bacterium was sequenced, and it had a high homology with that of Bacillus fumarioli LMG17489^T (AJ250056).     

Rapid, sensitive and direct analysis of exopolysaccharides from biofilm on aluminum surfaces exposed to sea water using MALDI-TOF MS

Biofilm studies have extensive significance since their results can provide insights into the behavior of bacteria on material surfaces when exposed to natural water. This is the first attempt of using matrix-assisted laser desorption/ionization-mass spectrometry (MALDI-MS) for detecting the polysaccharides formed in a complex biofilm consisting of a mixed consortium of marine microbes. MALDI-MS has been applied to directly analyze exopolysaccharides (EPS) in the biofilm formed on aluminum surfaces exposed to seawater. The optimal conditions for MALDI-MS applied to EPS analysis of biofilm have been described. In addition, microbiologically influenced corrosion of aluminum exposed to sea water by a marine fungus was also observed and the fungus identity established using MALDI-MS analysis of EPS. Rapid, sensitive and direct MALDI-MS analysis on biofilm would dramatically speed up and provide new insights into biofilm studies due to its excellent advantages such as simplicity, high sensitivity, high selectivity and high speed. This study introduces a novel, fast, sensitive and selective platform for biofilm study from natural water without the need of tedious culturing steps or complicated sample pretreatment procedures.     

Identifying bryostatins and potential precursors from the bryozoan Bugula neritina

The bryozoan species Bugula neritina contains the anticancer agent bryostatin. Bryostatin has been extracted from these sessile marine invertebrates since the late 1960s from the Gulf of California, Gulf of Mexico, as well as various locations on the eastern and western rims of the Pacific Ocean. In this work we are focusing on animals harvested in the Gulf of Mexico near Alligator Point (Florida). Using Inductively Coupled Plasma-Mass Spectrometry (ICP-MS) we measure the concentration of 70 elements in B. neritina, a sea squirt, and the sediment from the point of harvesting. This data has helped us generate an extraction process for marine natural products. Combining UV/VIS absorbance measurements with Matrix Assisted Laser Desorption Ionization-Time of Flight-Mass Spectrometer (MALDI-TOF-MS), we demonstrated that the specific form of bryostatin extracted is a function of the solvent. A 9.4T Fourier Transform-Ion Cyclotron Resonance (FT-ICR) mass spectrometer, whose sensitivity, mass accuracy, and resolving power allowed the exact empirical formulas of potential precursors of bryostatin to be identified, was employed. Finally we examine extracts of 14 marine species of the Gulf of Mexico, from the sand trout (Cynoscion arenarius) to chicken liver sponge (Chrondrilla nucula), all recently collected, which had shown some medicinal activity thirty years ago in a National Cancer Institute study. By the MALDI-TOF-MS, we were able to identify mass spectral features that correspond to different variations of the basic bryostatin structure, which raises the question if the bryozoans are the original source of bryostatin.     

Mangrove trees growing in a very saline condition but not using seawater

Mangrove trees, which develop along tropical coasts, are known to use saline water uptake. In French Guiana, the high salinity condition is the result of seawater evaporation on mud banks formed from the Amazon sediment flumes. In the back mangrove a few kilometres inland, groundwater, soil water and the xylem sap uptake in the trees remain highly salty, and only very tolerant plants like Avicennia germinans can flourish, whereas the less salt-tolerant Rhizophora mangle is more difficult to find. Curiously, the same Avicennia trees propagate on the seafront. However, stable isotope ratio mass spectrometry (IRMS) measurements and ion analysis (high-performance liquid chromatography (HPLC) and inductively coupled plasma atomic emission (ICP-AES) spectroscopy reveal that the origin of the water in the back mangrove is not seawater. It is freshwater percolating into the sand bars from the inland marshes and rainwater during the wet season that redissolves a marine evaporite and gives a saline groundwater. The absence of barren saltine areas ('tanne') in French Guiana could be explained by this freshwater inflow, the aquifer being no longer linked with the ocean. Copyright (c) 2008 John Wiley & Sons, Ltd.     

Influence of biological activity on <Superscript>65</Superscript>Zn and <Superscript>109</Superscript>Cd removal from tidal water by chronically-polluted mangrove sediments

The biological activity influence on the mangrove sediment capacity to remove ⁶⁵Zn and ¹⁰⁹Cd from tidal water was evaluated in a site chronically polluted. Benthic Activity Indexes (BAI), corresponding to relative estimates of biological impact on radiotracer accumulation, were higher for ¹⁰⁹Cd (~?38%) than for ⁶⁵Zn (~?10%) in the top centimetre of sediment. However, BAI exceeded 96% for deeper sediment layers. This apparent decrease in radiotracer diffusion into deep sediments through biological activity inhibition is stronger than reported for much less polluted mangrove nearby, suggesting that benthic organisms tolerant of chronic metal pollution may affect metal sorption mechanisms.     

New Arctic Marine Sediment Certified Reference Material for Elemental Analysis

A multi-elemental certified reference material (CRM) based on Arctic marine sediment was prepared and labeled GBW 07481. Approximately 4.5?kg of the sediment was collected during the third Chinese Arctic Expedition. The sediment was processed in procedures that included air drying, debris removal, drying, and milling. The final product contained particles that were generally smaller than 74?;m representing 99% of the total mass. The powder was poured into clean 10-mL brown glass vials and a total of 300 vials were obtained. The homogeneity and stability were preliminarily investigated to assess the suitability of the marine sediment as a candidate CRM. The candidate material was demonstrated to be suitable for this purpose; and hence the certification project was accomplished with nine reputable laboratories. More than 10 reliable analytical methods, including inductively coupled plasma-mass spectrometry (ICP-MS), inductively coupled plasma-atomic emission spectrometry (ICP-AES), and x-ray fluorescence (XRF), were used for analyzing the sediment for 68 elements. The results should be useful for assessing the analytical accuracy of major, minor, and trace elements in marine sediments. Therefore, the CRM is expected to play an important role in Arctic geochemical surveys and environmental assessment.     

Sequential determination of tin, arsenic, bismuth and antimony in marine sediment material by inductively coupled plasma atomic emission spectrometry using a small concentric hydride generator and L-cysteine as prereductant

A hydride generation system using a small concentric hydride generator combined with inductively coupled plasma atomic emission spectrometry (ICP-AES) was established to determine tin, arsenic, bismuth and antimony in a marine sediment material with L-cysteine as a pre-reductant. Influences of concentrations of three kinds of acids (HCl, HNO₃ and HClO₄), L-cysteine, and sodium tetrahydroborate(III) as well as sodium hydroxide were investigated. The interferences from transition ions were found to be insignificant for determination of the four elements in presence of L-cysteine. Under optimized conditions the detection limits were 0.6 ng/mL for arsenic(III), 0.8 ng/mL for antimony(III), 1.7 ng/mL for tin(IV), and 1.2 ng/mL for bismuth(III). The method was applied to determine the four elements in standard marine sediment materials and the results were in agreement with certified values.     

Absorption spectroscopy and binding constants for first-row transition metal complexes of a DOPA-containing peptide

A diverse array of biological systems incorporate 3,4-dihydroxyphenlyalanine (DOPA) into proteins and small molecules for cross-linking and material generation. Marine worm eggshells, sea squirt wound plugs, and marine mussel adhesives may all be formed by combining DOPA-containing molecules with high levels of metals. In order to provide model systems for characterizing these biomaterials, we carried out a study on metal binding to a DOPA-containing peptide. Ultraviolet-visible absorption spectra are presented for the AdopaTP peptide binding to Fe3+, V3+, VO2+, Mn3+, Ti4+, Cu2+, Co2+, and Ni2+ in mono, bis, and where applicable, tris coordination modes. Association constants were determined for selected metal ions binding to the peptide. In general, the spectroscopic and binding properties of this DOPA-containing peptide were found to be similar to those of catechol.     

Sequential determination of tin, arsenic, bismuth and antimony in marine sediment material by inductively coupled plasma atomic emission spectrometry using a small concentric hydride generator and L-cysteine as prereductant

A hydride generation system using a small concentric hydride generator combined with inductively coupled plasma atomic emission spectrometry (ICP-AES) was established to determine tin, arsenic, bismuth and antimony in a marine sediment material with L-cysteine as a pre-reductant. Influences of concentrations of three kinds of acids (HCl, HNO₃ and HClO₄), L-cysteine, and sodium tetrahydroborate(III) as well as sodium hydroxide were investigated. The interferences from transition ions were found to be insignificant for determination of the four elements in presence of L-cysteine. Under optimized conditions the detection limits were 0.6 ng/mL for arsenic(III), 0.8 ng/mL for antimony(III), 1.7 ng/mL for tin(IV), and 1.2 ng/mL for bismuth(III). The method was applied to determine the four elements in standard marine sediment materials and the results were in agreement with certified values. Received: 4 September 1997 / Revised: 14 October 1997 / Accepted: 7 November 1997     

The determination of selenium in sea water,silicates and marine organisms

Spectrophotometric procedures are described for the determination of selenium in sea water, silicates (especially marine sediments) and marine organisms. Coprecipitation with iron(III) hydroxide at pH 4–6 is used to concentrate selenium and to separate it from many of the commoner elements. Separation from iron and other cations is achieved by ion exchange. Selenium is determined photometrically with diaminobenzidine. Isotope dilution with selenium-75 is used to correct results for the small losses occurring during the analysis. Silicates can be decomposed without loss of selenium by means of a mixture of hydrofluoric and nitric acids. The method of Cummins et al., with sulphuric and perchloric acids in presence of molybdate ion, is highly satisfactory for the decomposition of bio-materials. For sea water, which contains ca. 0.4–0.5 <mg Se/l, a standard deviation of 0.03 μg/l was obtained. A silicate sediment and a sea weed containing ca. 1.5 μg Se/g and 0.8 μg Se/g respectively gave coefficients of variation of 8.0% and 4.7%. The U.S. Geological Survey standard granite G1 was found to contain 2.5 ± 0.1 μg Se/g.     

Examination of the charge-sensitive vibrational modes in bis(ethylenedithio)tetrathiafulvalene

We reinvestigated the two C=C stretching modes of the five-membered rings of ET (ET = bis(ethylenedithio)tetrathiafulvalene), namely, nu(2) (in-phase mode) and nu(27) (out-of-phase mode). The frequency of the nu(27) mode of ET(+) was corrected to be approximately 1400 cm(-1), which was identified from the polarized infrared reflectance spectra of (ET)(ClO(4)), (ET)(AuBr(2)Cl(2)), and the deuterium- or (13)C-substituted compounds of (ET)(AuBr(2)Cl(2)). It was clarified from DFT calculations that the frequency of the nu(27) mode of the flat ET(0) molecule was significantly different from that of the boat-shaped ET(0) molecule. We obtained the linear relationship between the frequency and the charge on the molecule, rho, for the flat ET molecule, which was shown to be nu(27)(rho) = 1398 + 140(1 - rho) cm(-1). The frequency shift due to oxidation is remarkably larger than that reported in previous studies. The fractional charges of several ET salts in a charge-ordered state can be successfully estimated by applying this relationship. Therefore, the nu(27) mode is an efficient probe to detect rho in the charge-transfer salts of ET. Similarly, a linear relationship for the nu(2) mode was obtained as nu(2)(rho) = 1447 + 120(1 - rho). This relationship was successfully applied to the charge-poor molecule of theta-type ET salts in the charge-ordered state but could not be applied to the charge-rich molecule. This discrepancy was semiquantitatively explained by the hybridization between the nu(2) and nu(3) modes.     

Inhibitory Effects of Vanadium-Binding Proteins Purified from the Sea Squirt Halocynthia roretzi on Adipogenesis in 3T3-L1 Adipocytes

Applied Biochemistry and Biotechnology - The inhibitory effects of vanadium-binding proteins (VBPs) from the blood plasma and the intestine of sea squirt on adipogenesis in 3T3-L1 adipocytes were...     

Vanadium biomonitoring by using <Emphasis Type="Italic">Perna perna</Emphasis> (Linnaeus, 1758) mussels transplanted in the coast of the State of São Paulo,Brazil

The increased pollution in the aquatic ecosystem has led to the investigation of toxic elements in sea water by using marine organisms to assess marine pollution from human activities. Among these organisms, the mollusks bivalves have been used as biomonitors since they can accumulate trace elements and other substances, without the occurrence of their death. In this study, Perna perna mussels were transplanted from a mussel farm (reference region) to four sites located in coastal regions of São Paulo State, Brazil, close to anthropic discharge areas. Vanadium was determined in mussel tissues by instrumental neutron activation analysis (INAA). Quality control of V analysis was checked by analyzing biological reference materials and the results obtained were precise and in good agreement with the certified values. Comparisons between the V concentrations obtained in transplanted mussels indicated that those from São Sebastião region, close to an oil terminal presented the highest concentration of this element, during spring.     

Kinetic studies of reactions of the nitrate radical (NO3) with peroxy radicals (RO2): an indirect source of OH at night?

A discharge-flow system, coupled to cavity-enhanced absorption spectroscopy (CEAS) detection systems for NO3 at lambda=662 nm and NO2 at lambda=404 nm, was used to investigate the kinetics of the reactions of NO3 with eight peroxy radicals at P approximately 5 Torr and T approximately 295 K. Values of the rate constants obtained were (k/10(-12) cm3 molecule-1 s-1): CH3O2 (1.1+/-0.5), C2H5O2 (2.3+/-0.7), CH2FO2 (1.4+/-0.9), CH2ClO2 (3.8(+1.4)(-2.6)), c-C5H9O2 (1.2(+1.1)(-0.5)), c-C6H11O2 (1.9+/-0.7), CF3O2 (0.62+/-0.17) and CF3CFO2CF3 (0.24+/-0.13). We explore possible relationships between k and the orbital energies of the reactants. We also provide a brief discussion of the potential impact of the reactions of NO3 with RO2 on the chemistry of the night-time atmosphere.     

Differential rates of reversibility of ecteinascidin 743-DNA covalent adducts from different sequences lead to migration to favored bonding sites.

Ecteinascidin 743 (Et 743), one of a series of structurally related antitumor antibiotics isolated from a marine tunicate, is currently in phase II clinical trials. Et 743 alkylates guanine N2 through the minor groove of DNA. Hydrogen-bonding networks that associate the drug with a three base pair DNA recognition site have been proposed to contribute to both the reactivity and the stability of the Et 743-DNA adduct. Here, we report that the reaction of Et 743 with DNA is reversible under nondenaturing conditions and that the rate of this reverse reaction depends critically upon the DNA-modified sequence. Quite unexpectedly, it was found that although the rates of alkylation are similar for the 5'-AGT and 5'-AGC sequences, reversal from the 5'-AGT sequence occurs faster than from the 5'-AGC sequence. Consequently, it is the differences in the rate of the reverse reaction that dictate the sequence selectivity of Et 743 toward its favored target sequence. As a direct consequence of the reversible nature of Et 743 with DNA, Et 743 can migrate from the nonfavored bonding sequence (e.g., 5'-AGT) to the favored DNA target site (e.g., 5'-AGC). The data suggest that the observed differences in the rate of reversibility arise from differences in the stability of the Et 743-DNA adduct at the 5'-AGT and 5'-AGC target sequences. On the basis of gel electrophoresis and (1)H NMR experiments, the Et 743-AGT adduct is less stable, has more dynamic motion, and produces different conformational changes in the DNA than the more stable Et 743-AGC adduct. The shuffling of Et 743-DNA adducts to the more stable alkylation sites has important implications for understanding the underlying relationship between the structural modification of DNA by Et 743 and its biological potency and efficacy in tumor cells.     

Rare Earth Elements and Bioavailability in Northern and Southern Central Red Sea Mangroves,Saudi Arabia

Different hypotheses have been tested about the fractionation and bioavailability of rare earth elements (REE) in mangrove ecosystems. Rare earth elements and bioavailability in the mangrove ecosystem have been of significant concern and are recognized globally as emerging pollutants. Bioavailability and fractionation of rare earth elements were assessed in Jazan and AlWajah mangrove ecosystems. Comparisons between rare earth elements, multi-elemental ratios, geo-accumulation index (Igeo), and bio-concentration factor (BCF) for the two mangroves and the influence of sediment grain size types on concentrations of rare earth elements were carried out. A substantial difference in mean concentrations (mg/kg) of REE (La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, and Lu) was established, except for mean concentrations of Eu, Gd, Tb, Tm, and Lu. In addition, concentrations of REEs were higher in the Jazan mangrove ecosystem. However, REE composition in the two mangroves was dominated by the lighter REE (LREE and MREE), and formed the major contribution to the total sum of REE at 10.2–78.4%, which was greater than the HREE contribution of 11.3–12.9%. The Post Archean Australian Shale (PAAS) normalized values revealed that lighter REE (LREE and MREE) were steadily enriched above heavy REE. More so, low and negative values of R_(H/M) were recorded in the Al Wajah mangrove, indicating higher HREE depletion there. The values of BCF for REEs were less than 1 for all the REEs determined; the recorded BCF for Lu (0.33) and Tm (0.32) were the highest, while the lowest BCF recorded was for Nd (0.09). There is a need for periodic monitoring of REE concentrations in the mangroves to keep track of the sources of this metal contamination and develop conservation and control strategies for these important ecosystems.     

Synthesis and characterization of mesoporous silica from selectively acid-treated saponite as the precursors

Mesoporous silicas were synthesized by hydrothermal treatment of selectively acid-treated saponite (an ideal structural formula: Na(1/3)Mg(3)(Si(11/3)Al(1/3))O(10)(OH)(2)), having a 2:1 type layered structure as the silica source and its porous properties were examined and compared with that from kaolinite (an ideal structural formula: Al(2)Si(2)O(5)(OH)(4)), having a 1:1 type layered structure. Synthetic saponite was selectively leached in H(2)SO(4) solutions with various concentrations (0.05-1 M) at 70 degrees C for 0.5 h. The resulting products (precursors) were mixed with cetyltrimethylammonium bromide (CTABr), NaOH and H(2)O, hydrothermally treated at 110 degrees C and removed the CTABr by calcining at 560 degrees C. A hexagonal mesoporous phase was obtained with higher Si/(Al(+Mg)) ratios of the resulting precursors. The XRD patterns of these products show the peaks assigned by a hexagonal lattice with a(0)=4.0-4.6 nm and the crystallinity becomes higher with higher Si/(Al(+Mg)) ratios of the precursors. The specific surface area (S(BET)) values of the present mesoporous silicas range from 800 to 1100 m(2)/g at CTABr/precursor=0.1 and although they are not as high as those from precursors prepared from calcining and acid-treatment of kaolinite (1420 m(2)/g), they are increased to 1400-1500 m(2)/g by increasing the ratio CTABr/precursor 0.2. The reason for the difference in the optimum preparation conditions between saponite and kaolinite may be attributed to the difference in the linkage of the SiO(4) tetrahedra in these precursors (i.e. layered or framework structures), which result in great differences in the selective leaching rates and structures of the resulting silica-rich products.