Quantitative gas-liquid chromatography of non-protein amino acids.

The quantitative gas--liquid chromatographic analysis of non-protein amino acids, in the presence of protein amino acids, is described. The amino acids were determined as their N-trifluoroacetyl n-butyl esters on an ethylene glycol adipate column. The relative molar responses of 38 amino acids are reported.     

CE methods for the determination of non-protein amino acids in foods

In addition to the 20 amino acids universally distributed as protein constituents in living organisms, there are other amino acids of non-protein origin that can be found in foods. The determination of these non-protein amino acids is interesting since they can be indicative of the quality and safety of foods. This work presents for the first time an updated and comprehensive review devoted to show the possibilities of capillary electrophoresis for the determination of non-protein amino acids in food samples. The results reported have been classified according to the chemical structure of the non-protein amino acid studied. Separation conditions as well as detection systems used have been detailed since most of these amino acidic compounds do not possess chromophore groups detectable by conventional UV-Vis detection, being in this case necessary a previous derivatization step. Finally, the application of microchip electrophoresis to the determination of non-protein amino acids in foodstuffs is also included in this review.     

Resolution of non-protein amino acids via Carica papaya lipase-catalyzed enantioselective transesterification

Carica papaya lipase-catalyzed transesterification of the 2,2,2-trifluoroethyl esters of N-benzyloxycarbonylated dl-amino acids carrying aliphatic side chains proceeded smoothly and, in almost all the cases, enantiospecifically (E = >200), affording the l-methyl esters and leaving the d-trifluoroethyl esters intact.     

Selective racemization of amino acid amides in the presence of amino acids

Conclusions The significant differences in the racemization rates of amino acids and the corresponding amides make it possible to carry out selective racemization of amides in the presence of optically active amino acids.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 7, pp. 1593–1596, July, 1986.     

High resolution capillary gas chromatography and gas chromatography–mass spectrometry of protein and non-protein amino acids,amino alcohols,and hydroxycarboxylic acids as their tert-butyldimethylsilyl derivatives

A simple, single-step derivatization technique is presented for capillary GC-FID and GC-MS separation and identification of common protein and non-protein constituents of natural peptides as their tert-butyldimethylsilyl (TBDMS) derivatives. The tert-butyldimethyl-silylation of more than sixty compounds was accomplished with high yields and a single peak observed for each component. The TBDMS derivatives of both the protein and non-protein substances, moreover, exhibit excellent separation on apolar capillary columns and can be resolved completely using a polydimethylsiloxane or 5 % phenyl polydimethylsiloxane column and, complementarily, a 50 % phenyl polydimethylsiloxane column. Retention data and molar responses of the TBDMS derivatives on the polydimethylsiloxane column are compiled. Direct coupling of the 5 % phenyl polydimethylsiloxane column to an ion trap mass spectrometer enabled fast separation and identification of the investigated components, at nanomole to picomole levels, on the basis of retention and mass spectral data. The general usefulness of the method is demonstrated by research into new biologically active peptides isolated from entomopathogenic fungi.     

Resolution of non-protein amino acids via the microbial protease-catalyzed enantioselective hydrolysis of their N-unprotected esters

In the Aspergillus oryzae protease-catalyzed ester hydrolysis, substitution of N-unprotected amino acid esters for the corresponding N-protected amino acid esters resulted in a large enhancement of the hydrolysis rate, while the enantioselectivity was deteriorated strikingly when the substrates employed were the conventional methyl esters. This difficulty was overcome by employing esters bearing a longer alkyl chain such as the isobutyl ester. Utilizing this ester, amino acids carrying an aromatic side chain were resolved with excellent enantioselectivities (E=50 to >200). With amino acids bearing an aliphatic side chain also, good results in terms of the hydrolysis rate and enantioselectivity were obtained by employing such an ester as the isobutyl ester. Moreover, the enantioselectivity proved to be enhanced further by conducting the reaction at low temperature. This procedure was applicable to the case where the enantioselectivity was not high enough even by the use of the isobutyl ester.     

Statistical mechanical treatment of protein conformation. II. A three-state model for specific-sequence copolymers of amino acids.

A one-dimensional three-state Ising model [involving alpha-helical (alpha), extended (epsilon), and coil (or other) (c) states] for specific-sequence copolymers of amino acids ahs been formulated in order to treat the conformational states of proteins. This model involves four parameters (wh,iota, vh, iota, v episilon, iota, and uc, iota), and requires a 4 X 4 matrix for generating statistical weights. Some problems in applying this model to a specific-sequence copolymer of amino acids are discussed. A nearest-neighbor approximation for treating this three-state model is also formulated; it requires a 3 X 3 matrix, in which the same four parameters appear, but (as with the 4 X 4 matrix treatment) only three parameters (wh, uh, and v epsilon) are required if relative statistical weights are used. The relationship between the present three-state model (3 X 3 matrix treatment) and models of the helix--coil transition is discussed. Then, the three-state model (3 X 3 matrix treatment) is incorporated into an earlier (Tanaka--Scheraga) model of the helix-coil transition, in which asymmetric nucleation of helical sequences is taken into account. A method for calculating molecular averages and conformational-sequence probabilities, P(iota/eta/(rho)), i.e., the probability of finding a sequence of eta residues in a specific conformational state (rho), starting at the iotath position of the chain, is described. Two alternative methods for calculating P(iota/eta/(rho)), that can be applied to a model involving any number of states, are proposed and presented; one is the direct matrix-multiplication method, and the other uses a first-order a priori probability and a conditional probability. In this paper, these calculations are performed with the nearest-neighbor model, and without the feature of asymmetric nucleation. Finally, it is indicated how the three-state model and the methods for computing P(iota/eta/(rho)) can be applied to predict protein conformation.     

Chemistry of dithiocarbamate derivatives of amino acids. Part II. Complexes of nickel(II) with derivatives of branched and cyclic amino acids

Summary Barium salts of the dithiocarbamate derivates of the amino acids: DL-valine, L-valine, DL-leucine, DL-isoleucine and L-proline have been synthesized. The anions have been used to obtain the corresponding nickel(II) complexes in acid form. The complexes are diamagnetic, and coordination takes place in a near-square planar geometry around the nickel(II) ion through the sulphur atoms of the dithiocarbamate moiety, the structure being confirmed by i.r.,¹H n.m.r., u.v.-vis spectros copies and by chemical analysis.No significant difference has been found between the physicochemical properties (i.r. and 'H n.m.r. spectra and magnetic properties) of the complexes prepared from the dithiocarbamate derivatives of DL- and L-valine, but d-d bands in the u.v.-vis spectra show a slight different intensity.     

非蛋白氨基酸对生物活性多肽的修饰及其构效关系的研究进展

简述了非蛋白氨基酸的结构特征和生理活性。介绍了某些天然存在的含非蛋白氨基酸的生物活性肽及非蛋白氨基酸残基在相应活性肽中的重要作用。着重总结了非蛋白氨基酸对生物活性肽进行修饰的方式和构效关系研究的进展。     

One-electron reduction of excited NMN and NADP in the presence of amino acids

Excitation of oxidized forms of nicotinamide coenzymes (NADP⁺, NMN⁺) at 254 nm under anaerobic conditions in the presence of EDTA, lysine, serine, glycine leads, in the initial stage of irradiation, to photoreduction of coenzyme. Formation of the photoreduction products was observed by polarographic, spectrophotometric and enzymatic methods. Quantum yields for NMN⁺ and NADP⁺ photoreduction have been calculated and a mechanism proposed. No photoreduction was observed with histidine. Long-term irradiation leads to further reduction of the nicotinamide ring to tetrahydroderivatives absorbing at 280–290 nm. The photochemically generated dimers undergo phototransformation to the parent monomers on irradiation at 365 nm either in the presence or absence of oxygen. The biological significance of the results is discussed.     

N-phosphoryl amino acids and peptides. Part II: Fast atom bombardment mass spectrometry of N-di-isopropyloxyphosphoryl and N-dibutyloxyphosphoryl amino acids

The positive ion fast atom bombardment mass spectra of N-di-isopropyloxyphosphoryl (Dipp) and N-dibutyloxyphosphoryl (Dbp) amino acids or amino acid methyl esters are presented; and according to the observation of the metastable ions and the high-resolution accurate mass measurement their fragmentation patterns are postulated. Both types of compounds were found to undergo similar fragmentations to produce (HO)₂P(O)N?CH? R + H⁺, in most cases as the most abundant fragment ion of structural significance. An intrinsical difference between the two types of compounds is that N-Dippamino acids appear to favour the successive losses of two molecules of propylene, while the loss of HCOOH seems to be preferred by the Dbp amino acids. For those compounds containing an extra functional group on the side chain of amino acids such as serine or glutamic acid some other type of fragmentation was observed besides the normal phenomenon.