Transglutaminase surface recognition by peptidocalix[4]arene diversomers

A series of N-linked tetrakis(tetrapeptido)calix[4]arene diversomers, 3A-P, has been synthesized by coupling of a cone calix[4]arene tetracarboxylic acid chloride with tetrapeptides 1A-P obtained in a parallel fashion. The inhibition activity of 3A-P towards tissue and microbial transglutaminase was evaluated by in vitro assays with a labeled substrate. Kinetic analysis using one of the most active derivatives (3A) showed a noncompetitive inhibition with respect to the amino acceptor substrate and an uncompetitive inhibition with respect to amino donor substrate. Experimental results are in accordance with an inhibition due to a protein specific surface recognition on a region noncomprising the enzyme active site.     

Complexation of phenols by calix[4]arene Diethers in a low-permittivity solvent. Self-switched complexation by 25,27-Dibenzyloxycalix[4]arene

To improve the selectivity of sensing, the thermodynamics of the complex formation of some calix[4]arene hosts with neutral phenol guests was studied in carbon tetrachloride as nonpolar solvent. The molecular shape of calixarenes was varied by the selective functionalization with tBu and O-CH2-Ph (O-benzyl) or OPr groups at the upper and lower rim, respectively. To vary the electron density on the guest's aromatic rings, the parent phenol was functionalized in the para position with electron-withdrawing Cl, as well as H, and electron-releasing CH3 and tBu groups. To study the interaction between calixarene and the guests, PL and quantum-chemical methods were applied. The results revealed an overall 1:1 complex stoichiometry except for the parent dibenzyloxycalix[4]arene, where 1:2 host-guest stoichiometries were observed irrespective of the quality of phenol. In the latter case, the complex formation shows a self-switched character: the first phenol molecule is included in the calixarene cavity, and only afterward, a second guest molecule is bound by the two benzyloxy aromatics. Although the enthalpy change predicts strong interaction between the host and the guest, the Gibbs free energy change of the complex formation is small, resulting in a relatively low complex stability. The solvent-relaxation measurements support that the unexpected entropy change could be the consequence of the reorientation of solvent molecules around the calixarene building block. The reorientation is assisted by dispersive forces between solute and solvent molecules. IR and RAMAN analysis of the complexes exclude a considerable participation of the phenolic OH group in the stabilization of the complex. This result is in agreement with earlier findings where deterministic role of pi-pi interaction in the complex stability was assumed.     

Calorimetric, NMR, and UV Investigations of Aliphatic l-Amino Acids Complexation by Calix[4]arene Bis-hydroxymethylphosphous Acid

The stability constants, enthalpy ΔH ⁰, entropy ΔS ⁰, and Gibbs energy ΔG ⁰ were determined for the host–guest complexes (1:1) of calix[4]arene bis-hydroxymethylphosphous acid with glycine, l-alanine, l-valine, l-leucine, l-isoleucine residues in methanol solution with the aid of the titration experiments followed by calorimetric and spectroscopic (¹H NMR, UV) methods. The experimental data indicated that the host–guest complexation was under control of the direct electrostatic interaction between negatively charged calixarene phosphoryl group and amino acid residue NH ₃ ⁺ group, modulated by the hydrophobic interaction, which drive the inclusion of the residue alkyl side-chain into the calixarene cavity. The stability of the inclusion complexes was found correlated with the size of the aliphatic amino acid’s side-chain. The experimental data were additionally analyzed in the terms of the three state model corresponding to coexistence of 2:1 and 1:1 complexation equilibria.     

N-linked peptidocalix[4]arene bisureas as enantioselective receptors for amino acid derivatives

Bisurea calix[4]arenes 1 and 2 possessing L-amino acid moieties at the lower rim were synthesized by reaction of the methyl esters of glycine, L-alanine, or L-isoleucine with the appropriate isocyanate (12 or 13), obtained with a safe and efficient Curtius rearrangement from the corresponding carboxylic acid derivatives. The conformational properties of the ligands 1 and 2 were investigated by means of a combined NMR and molecular modeling study which evidences that they are deeply influenced by strong intramolecular H-bonds between the urea NH groups and the vicinal phenolic oxygen atoms or the opposite urea C=O group. Complexation studies performed by ESI-MS and NMR spectroscopy in acetone solution show that the binding ability of these bisurea hosts decreases by increasing the side chain size of the amino acid. Host 2b has a remarkable binding ability for the N-acetyl-D-phenylalaninate anion with an interesting enantioselectivity (KDass/KLass=4.14), which is explained on the basis of a three-point interaction mode of binding.     

Synthesis and Complexation Properties of Novel Biscalixarene Composed of Calix[4]arene and Thiacalix[4]arene Subunits

Biscalixarenes, as examples of higher order molecular architectures than normal calixarene derivatives, were studied extensively in the recent years due to they possess two calixarene cavities which have the potential for complexing with two guests in two…     

Inclusion Complexation of Diphenylamine-4-diazonium Chloride and p-Sulfonatocalix[4]arene

Inclusion complexation of p-sulfonatocalix[4]arene (SC4A) and diphenylamine-4-diazonium chloride (DDC) in aqueous solution was investigated in this study. The inclusion of DDC in the cavity of SC4A leads to ¹H NMR chemical shifts of DDC moving towards higher magnetic field. The complexation of SC4A also results in a bathochromic shift and a decrease in optic intensity of the absorption spectrum of DDC. In the presence of SC4A, the thermal stability of DDC in aqueous solution increases significantly while its photosensitivity still remains high.     

Discrimination of guests encapsulation in large hexameric molecular capsules in solution: pyrogallol[4]arene versus resorcin[4]arene capsules

NMR experiments demonstrate that, although 2b and 3b form hexameric capsules in chloroform solutions and despite the very similar building units of these hexamers, 3b encapsulates only the noncharged trialkylamines while 2b can encapsulate both the noncharged trialkylamines and the respective ammonium salts obtained by the addition of DCl. In fact, it was found that protonation that forms in situ the ammonium salt ejects the guest from the hexameric capsule of 3b. This is a general observation as it was found for guests containing alkyl chains of four, five, six, and eight carbons.     

Complexation of thiacalix[4]arene methylphosphonic and sulphonic acids with amino acids

In this paper, host–guest complexation process of thiacalix[4]arene tetrakis–methylphosphonic and tetrakis–sulphonic acids with amino acids by HPLC and molecular modelling methods has been studied. It was shown that thiacalix[4]arene tetrakis–methylphosphonic acid due to transformability of macrocyclic skeleton and flexibility of methylphosphonic substituents can adopt its conformation for strong multicentre binding of the amino acids with association constant values 530–10,140 M^? 1 in water.     

Complexation of Some Amino Acids and Peptides by p-Sulfonatocalix[4]arene and Hexasodium p-Sulfonatocalix[6]arene in Aqueous Solution

The stability constants (log K), the reaction enthalpy( H) and entropy ( S) of the complexesformed between some amino acids (glycine, L-alanine,L-valine, L-leucine, L-phenylalanine, L-tryptophan,L-threonine, and L-lysine) and peptides (glycyl-glycine,glycyl-L-alanine, glycyl-L-leucine, glycyl-L-phenylalanine,L-leucyl-glycine, L-leucyl-L-alanine, glycyl-L-valine,L-leucyl-glycyl-glycine, and glycyl-glycyl-glycine) withp-sulfonatocalix[4]arene and hexasodiump-sulfonatocalix[6]arene in aqueous solutions by meansof calorimetric titration have been investigated. The reportedresults demonstrate that the amino acids and peptides under studyform complexes with both p-sulfonatocalix[4]areneand hexasodium p-sulfonatocalix[6]arene. In the case of theamino acids and peptides the complexation with water-solublecalixarenes in aqueous solution is favored by enthalpiccontributions and disfavored by entropic contributions. However,no influence of the ring size of the calixarenes upon thecomplexation is observed. By comparison with the reaction ofthe sodium salt of phenol-4-sulfonic acid with amino acids amacrocyclic effect in case of the calixarenes is possible.     

Complexation of amino acids derivatives in water by calix[4]arene phosphonic acids

Series of the calix[4]arene phosphonic acids with various substituents at the lower rim was synthesized. Complexing properties of these receptors towards methyl esters of six amino acids strongly depended on the calix[4]arene conformation flexibility. The complex formation processes were monitored using ¹H NMR spectroscopy (deuterated phosphate buffer at pD 7.3, 22 °C) and association constant values were evaluated. Inherently mobile calix[4]arene molecule 3 occurred in cone conformation in aqueous solution turned out to be more effective in complexation of the basic amino acids methyl esters compared to the rigid 2 and flexible 4. Mixed 1:2 and 2:1 (host–guest) complexes were observed for compound 1 with all amino acids methyl esters.     

Complexation Thermodynamics of p-tert-Butylcalix[4]arene Derivatives with Light Lanthanoid Nitrates in Acetonitrile

Abstract

Calorimetric titrations have been performed for the first time in anhydrous acetonitrile at 25°C to give the complex stability constant (K _S) and thermodynamic quantities for the complexation of light lanthanoid(III) nitrates (La-Gd) with 5,11,17,23-tetra-tert-butyl-26,28-bis(cyanomethoxy)-25,27-dihydroxy-calix[4]arene (1) and 5,11,17,23-tetra-tert-butyl-26, 28-bis(2-aminoethoxy)-25,27-dihydroxycalix[4]arene (2). X-ray crystallographic structures of 1 and 2 were also determined and compared. Possessing the cyanomethoxy and aminoethyl substituents, 1 and 2 displayed strikingly different cation binding abilities and selectivity profiles with much higher K _S values for La³⁺ and Ce³⁺, which may be related to the original structures in the solid state. Thus, the binding profile for 2 showed a rapid decrease in K _S with decreasing ionic diameter from La³⁺ to Pr³⁺ and then became flat up to Gd³⁺, while 1 gave a very flat profile which is superimposable with that for 2 between Pr³⁺-Gd³⁺. Thermodynamically, the complexation is driven absolutely by enthalpy which compensates the entropic loss arising from the structural freezing of the calix[4]arene derivatives upon simultaneous binding of lanthanoid ion by the phenolic oxygen and acetonitrile molecule in the cavity. The general validity and the meaning of the compensative enthalpy-entropy relationship observed are discussed.     

A C-linked peptidocalix[4]arene bearing four dansyl groups: a highly selective fluorescence chemosensor for fluoride ions

A new C-linked peptidocalix[4]arene functionalized with four l-alanine and dansyl units at the upper rim has been prepared, which exhibited highly selective recognition towards F⁻ along with weaker complexation to AcO⁻ and H₂PO₄⁻ and no complexation to Cl⁻, Br⁻, I⁻, and HSO₄⁻ by fluorescence spectroscopy and ¹H NMR method.     

杯[4]芳烃黄原酸酯衍生物的合成与阳离子萃取性能

以二氧六环作溶剂, 杯[4]芳烃二甲氧基二羟乙氧基衍生物2与氢氧化钾、二硫化碳作用合成了杯芳烃黄原酸盐衍生物3, 并进一步与碘甲烷或氯化苄反应首次合成了含黄原酸酯基的杯芳烃衍生物4a和4b. 阳离子萃取试验表明该新型杯芳烃衍生物比单硫杂杯芳烃衍生物具有更好的过渡金属离子萃取性能.     

Thermodynamics of Complexation of Alkali Metal Cations by a Lower-Rim Calix[4]arene Amino Acid Derivative

Complexation of alkali metal cations with 5,11,17,23-tetra-tert-butyl-26,28,25,27-tetrakis(O-methyl-d-α-phenylglycylcarbonylmethoxy)calix[4]arene (L) in methanol and acetonitrile was studied by means of direct and competitive microcalorimetric titrations at 25 °C. The thermodynamic parameters of complexation reactions showed that all the reactions investigated were enthalpically controlled. In both solvents the reaction enthalpy was most favorable for Na⁺ binding with L leading to the highest affinity of the examined calix[4]arene derivative towards this cation. The solubilities (and consequently the solution Gibbs energies) of the ligand were determined, as were the corresponding solution enthalpies and entropies. No significant difference was observed between the solution thermodynamic quantities of L in the two solvents, whereas the transfer of complex species from methanol to acetonitrile was found to be quite favorable. The interactions of solvent molecules with the free and the complexed ligand were investigated by ¹H NMR spectroscopy. It was concluded that in both cases inclusion of an acetonitrile molecule into the hydrophobic cavity of L occurred, which significantly affected the cation complexation in this solvent. The thermodynamic data were discussed regarding the structural properties of the ligand, the free and the complexed cations as well as the solvation abilities of the solvents examined. In this respect, the specific solvent-solute interactions and the intramolecular NH⋅⋅⋅O=C hydrogen bonds at the lower rim of L were particularly addressed.     

Noncovalent Complexation of Monoamine Neurotransmitters and Related Ammonium Ions by Tetramethoxy Tetraglucosylcalix[4]arene

The noncovalent complexation of monoamine neurotransmitters and related ammonium and quaternary ammonium ions by a conformationally flexible tetramethoxy glucosylcalix[4]arene was studied by electrospray ionization Fourier transform ion cyclotron resonance (ESI-FTICR) mass spectrometry. The glucosylcalixarene exhibited highest binding affinity towards serotonin, norepinephrine, epinephrine, and dopamine. Structural properties of the guests, such as the number, location, and type of hydrogen bonding groups, length of the alkyl spacer between the ammonium head-group and the aromatic ring structure, and the degree of nitrogen substitution affected the complexation. Competition experiments and guest-exchange reactions indicated that the hydroxyl groups of guests participate in intermolecular hydrogen bonding with the glucocalixarene.     

Complexation of di-benzyloxy ether derivatives of calix[4]arene with alkali earth metal cations

The synthesis and complexing abilities of 26,28-bis-benzyloxy-25,27-dihydroxy-5,11,17,23-tetra-tertbutyl-calix[4]arene towards alkali earth metal ions Mg²⁺, Ca²⁺, Sr²⁺, and Ba²⁺ in a methanol-chloroform mixture have been evaluated at 25°C, using UV-Vis spectrophotometric techniques. The results showed that the ligand is capable to complex all alkali earth cations by 1:1 metal to ligand ratios. The selectivity presented considering the calculated stability constants are in the order Mg²⁺ > Ca²⁺ > Sr²⁺ > Ba²⁺ towards the ligand.     

Compensation of steric demand by cation-pi interactions,cobaltocenium cations as guests in tetraurea calix[4]arene dimers

The affinities of ferrocene (2) and the cobaltocenium cation (3+), which have roughly the same size and differ in their charge, towards the inner cavity of the dimeric capsule formed by tetraurea calix[4]arene (1) were studied in C2D4Cl2 solutions. While 3+, which occupies more than 75% of the internal volume of the dimer, is readily encapsulated this is not the case for 2. This is probably due to cation-pi interactions, which operate only between 3+ and the aromatic rings of the calix[4]arene dimer. We found that the affinity of the cobaltocenium cation is higher than that of the tropylium cation (4+) and is only 2-3 times less than that of the tetraethylammoniun cation (5+). From the variable temperature 1H NMR spectra of this capsule, the free energy of activation at 298 K (deltaGdouble dagger(298K)) for the reorientation of the hydrogen bonded belt between the two parts of the dimer could be determined by total line shape analysis for the aromatic protons of the calixarene. The value of 14.3 +/- 0.2 kcal mol(-1) for the dimeric capsules of 3+ PF6- is very similar to the free activation energy found for dimeric capsules of 1 with 4+ PF6- and 5+ PF6- in C2D4Cl2. It becomes significantly lower, if PF6- is replaced by BF4-. We also found that ten times more DMSO is needed to disrupt the capsule 1 x 3+ x 1 than the corresponding 1 x 1 dimer containing benzene as guest. This demonstrates again the importance of the cation-pi interactions for the stability of such hydrogen-bonded dimeric capsules.     

硫(硒)杂多杯[4]芳烃合成及其络合性能研究

合成了下缘硫、硒杂杯[4]芳烃, 然后与杯芳烃片段2,6-二(溴甲基)-4-甲氧基-甲苯在NaH存在条件下缩合得到硫、硒杂多杯[4]芳烃5a和5b. 离子萃取实验表明硫、硒杂多杯[4]芳烃显著增加了对Ag＋和Hg2＋重金属离子的萃取效果.     

Recognition of guests bearing donor and acceptor hydrogen bonding groups by heteroditopic calix[4]arene receptors

The synthesis of new hosts specifically designed for the recognition of neutral guests bearing donor-acceptor hydrogen bonding groups is described. These hosts are characterized by the presence of two distinct binding region in close proximity: the rigid π-donor cavity and the H-bond donor N-methylene-N′-phenylureido group inserted onto the upper rim of the calix[4]arene skeleton. The binding abilities of these receptors were investigated toward a series of neutral ditopic organic molecules in CDCl₃ solution by ¹H NMR spectroscopy. The results obtained show that rigidity of the calix[4]arene apolar cavity is the control element in determining efficiency. In fact, compared with the more rigid 2, host 10, where the rigidity of the cone structure is maintained by hydrogen bonding of the OH of the lower rim, a decrease of efficiency of almost one order of magnitude was observed. The cooperative effect of the two binding region of host 2 was verified with different classes of ditopic guests. Good efficiency in the recognition of urea derivatives and dimethylsulfoxide was achieved.