Experimental and Computational Investigations of the Properties of Fluorinated Single‐Walled Carbon Nanotubes

Fluorination of single‐walled carbon nanotubes by reaction with elemental fluorine at elevated temperatures provides fluorinated single‐walled carbon nanotubes (F‐SWNT), which have the highest degree of functionalization (up to F/C=1/2) of any derivatized carbon‐nanotube material reported to date. Also, F‐SWNTs have received more scrutiny than any other functionalized carbon nanotubes. This Minireview covers experimental and computational investigations of F‐SWNTs with a focus on the nature and the strength of the C–F linkage.     

Influence of the Homopolar Dihydrogen Bonding CH⋅⋅⋅HC on Coordination Geometry: Experimental and Theoretical Studies

The reaction of the N‐thiophosphorylated thiourea (HOCH₂)(Me)₂CNHC(S)NHP(S)(OiPr)₂ (HL), deprotonated by the thiophosphorylamide group, with NiCl₂ leads to green needles of the pseudotetrahedral complex [Ni(L‐1,5‐S,S′)₂] ? 0.5 (n‐C₆H₁₄) or pale green blocks of the trans square‐planar complex trans‐[Ni(L‐1,5‐S,S′)₂]. The former complex is stabilized by homopolar dihydrogen C?H???H?C interactions formed by n‐hexane solvent molecules with the [Ni(L‐1,5‐S,S′)₂] unit. Furthermore, the dispersion‐dominated C?H??? H?C interactions are, together with other noncovalent interactions (C?H???N, C?H???Ni, C?H???S), responsible for pseudotetrahedral coordination around the Ni^II center in [Ni(L ‐1,5‐S,S′)₂] ? 0.5 (n‐C₆H₁₄).     

A Combined Experimental and Theoretical Electron Density Study of Intra‐ and Intermolecular Interactions in Thiourea S,S‐Dioxide

The thiourea S,S‐dioxide molecule is recognized as a zwitterion with a high dipole moment and an unusually long C? S bond. The molecule has a most interesting set of intermolecular interactions in the crystalline state—a relatively strong O???H? N hydrogen bond and very weak intermolecular C???S and N???O interactions. The molecule has C_s symmetry, and each oxygen atom is hydrogen‐bonded to two hydrogen atoms with O???H? N distances of 2.837 and 2.826 Å and angles of 176.61 and 158.38°. The electron density distribution is obtained both from Xray diffraction data at 110 K and from a periodic density functional theory (DFT) calculation. Bond characterization is made in terms of the analysis of topological properties. The covalent characters of the C? N, N? H, C? S, and S? O bonds are apparent, and the agreement on the topological properties between experiment and theory is adequate. The features of the Laplacian distributions, bond paths, and atomic domains are comparable. In a systematic approach, DFT calculations are performed based on a monomer, a dimer, a heptamer, and a crystal to see the effect on the electron density distribution due to the intermolecular interactions. The dipole moment of the molecule is enhanced in the solid state. The typical values of ρ_b and H_b of the hydrogen bonds and weak intermolecular C???S and N???O interactions are given. All the interactions are verified by the location of the bond critical point and its associated topological properties. The isovalue surface of Laplacian charge density and the detailed atomic graph around each atomic site reveal the shape of the valence‐shell charge concentration and provide a reasonable interpretation of the bonding of each atom.     

σ‐Hole Bond Versus Hydrogen Bond: From Tetravalent to Pentavalent N,P, and As Atoms

Ab initio calculations were performed on complexes of ZH₄⁺ (Z=N, P, As) and their fluoro derivatives, ZFH₃⁺ and ZF₄⁺, with a HCN (or LiCN) molecule acting as the Lewis base through the nitrogen electronegative center. It was found that the complexes are linked by the Z? H???N hydrogen bond or another type of noncovalent interaction in which the tetravalent heavy atom of the cation acts as the Lewis acid center, that is, when the Z???N link exists, which may be classified as the σ‐hole bond. The formation of the latter interaction is usually preferable to the formation of the corresponding hydrogen bond. The Z???N interaction may be also considered as the preliminary stage of the S_N2 reaction. This is supported by the observation that for a short Z???N contact, the corresponding complex geometry coincides with the trigonal‐bipyramidal geometry typical for the transition state of the S_N2 reaction. The Z???N interaction for some of complexes analyzed here possesses characteristics typical for covalent bonds. Numerous interrelations between geometrical, topological and energetic parameters are discussed. The natural bond orbital method as well as the Quantum Theory of “Atoms in Molecules” is applied to characterize interactions in the analyzed complexes. The experimental evidences of the existence of these interactions, based on the Cambridge Structure Database search, are also presented. In addition, it is justified that mechanisms of the formation of the Z???N interactions are similar to the processes occurring for the other noncovalent links. The formation of Z???N interaction as well as of other interactions may be explained with the use of the σ‐hole concept.     

The Strained Sesquiterpene β‐Caryophyllene as a Probe for the Solvent‐Assisted Epoxidation Mechanism

In our attempt to synthesize β‐caryophyllene oxide in food‐compatible conditions, we observed the uncatalyzed and highly selective epoxidation of β‐caryophyllene, a strained bicyclic sesquiterpene, in ethanol with aqueous H₂O₂ under radical‐suppressing conditions without the addition of a catalyst. The unusual reactivity of β‐caryophyllene allowed us to use it as a probe for the mechanism of the solvent‐assisted epoxidation in a wide range of organic solvents. A kinetic study was performed to investigate the epoxidation mechanism; an excellent correlation was found between the observed epoxidation rates in different solvents and the Abraham’s hydrogen bond formation parameters of these solvents. By means of computational analysis, it was found that the main role of the solvent consists of the stabilization of the elongated O?O bond of H₂O₂ in the transition state through hydrogen‐bond donation to the leaving OH moiety of H₂O₂. α‐Humulene was found to possess similar reactivity as β‐caryophyllene whereas isocaryophyllene—the unstrained isomer of β‐caryophyllene—was unreactive.     

Torsional and Electronic Factors Control the C−H⋅⋅⋅O Interaction

The precise role of non‐conventional hydrogen bonds such as the C?H???O interaction in influencing the conformation of small molecules remains unresolved. Here we survey a series of β‐turn mimetics using X‐ray crystallography and NMR spectroscopy in conjunction with quantum calculation, and conclude that favourable torsional and electronic effects are important for the population of states with conformationally influential C?H???O interactions. Our results also highlight the challenge in attempting to deconvolute a myriad of interdependent noncovalent interactions in order to focus on the contribution of a single one. Within a small molecule that is designed to resemble the complexity of the environment within peptides and proteins, the interplay of different steric burdens, hydrogen‐acceptor/‐donor properties and rotational profiles illustrate why unambiguous conclusions based solely on NMR chemical shift data are extremely challenging to rationalize.     

Static and Dynamic Properties of 1,1′‐Bi‐2‐naphthol and Its Conjugated Acids and Bases

Several convergent techniques were used to characterize 1,1′‐bi‐2‐naphthol (BINOL) and some of its properties. Its acidity in the gas‐phase, from neutral species to monoanion, was measured by mass spectrometry. The conformation and structure of BINOL in the gas phase was determined by microwave rotational spectroscopy. NMR experiments in fluorosulfonic acid established that BINOL was monoprotonated on one of the hydroxyl oxygen atoms. The enantiomerization barriers reported in the literature for BINOL under neutral, basic, and acid conditions were analyzed with regard to the species involved. Finally, DFT calculations allowed all of these results to be gathered in a coherent picture of the BINOL structure.     

Theoretical Studies on the Hydrogen‐bonding and π‐Stacking Interactions in the m‐Nisoldipine Polymorphism Dimers

The intermolecular interactions in the dimers of m‐nisoldipine polymorphism were studied by B3LYP calculations and quantum theory of "atoms in molecules" (QTAIM) studies. Four geometries of dimers were obtained: dimer I (a‐dimer, O···H? N), dimer II (b‐dimer, O···H? N), dimer III (b‐dimer, π‐stacking‐c), and dimer IV (b‐dimer, π‐stacking‐p). The interaction energies of the four dimers are along the sequence of II>I>III>IV. The intermolecular distance of the interactions follows the order: I (O···H? N)II>III>IV, and the electrostatic character decreases along the sequence: I>II>III>IV.     

Experimental and Computational Studies of the Molybdenum‐Flanking Arene Interaction in Quadruply Bonded Dimolybdenum Complexes with Terphenyl Ligands

To clarify the nature of the Mo?C_arene interaction in terphenyl complexes with quadruple Mo?Mo bonds, ether adducts of composition [Mo₂(Ar′)(I)(O₂CR)₂(OEt₂)] have been prepared and characterized (Ar′=Ar^Xyl₂, R=Me; Ar′=ArMes₂, R=Me; Ar′=Ar^Xyl2, R=CF₃) (Mes=mesityl; Xyl=2,6‐Me₂C₆H₃, from now on xylyl) and their reactivity toward different neutral Lewis bases investigated. PMe₃, P(OMe)₃ and PiPr₃ were chosen as P‐donors and the reactivity studies complemented with the use of the C‐donors CNXyl and CN₂C₂Me₄ (1,3,4,5‐tetramethylimidazol‐2‐ylidene). New compounds of general formula [Mo₂(Ar′)(I)(O₂CR)₂( L )] were obtained, except for the imidazol‐2‐ylidene ligand that yielded a salt‐like compound of composition [Mo₂(Ar^Xyl2)(O₂CMe)₂(CN₂C₂Me₄)₂]I. The Mo?C_arene interaction in these complexes has been analyzed with the aid of X‐ray data and computational studies. This interaction compensates the coordinative and electronic unsaturation of one of the Mo atoms in the above complexes, but it seems to be weak in terms of sharing of electron density between the Mo and C_arene atoms and appears to have no appreciable effect in the length of the Mo?Mo, Mo?X, and Mo? L bonds present in these molecules.     

Self‐Assembly Structures of 1H‐Indazoles in the Solution and Solid Phases: A Vibrational (IR,FIR, Raman,and VCD) Spectroscopy and Computational Study

1H‐indazoles are good candidates for studying the phenomena of molecular association and spontaneous resolution of chiral compounds. Thus, because the 1H‐indazoles can crystallize as dimers, trimers, or catemers, depending on their structure and the phase that they are in, the difficulty in the experimental analysis of the structure of the family of 1H‐indazoles becomes clear. This difficulty leads us to contemplate several questions: How can we determine the presence of different structures of a given molecular species if they change according to the phase? Could these different structures be present in the same phase simultaneously? How can they be determined? To shed light on these questions, we outline a very complete strategy by using various vibrational spectroscopic techniques that are sensitive (VCD) and insensitive (IR, FIR, and Raman) towards the chirality, together with quantum chemical calculations.     

Color Polymorphism: Understanding the Diverse Solid‐State Packing and Color in Dimethyl‐3,6‐dichloro‐2,5‐dihydroxyterephthalate

Dimethyl‐3,6‐dichloro‐2,5‐dihydroxyterephthalate (MCHT) is known to exist in three differently packed crystals having three different colors, namely yellow (Y), light yellow (LY), and white (W). Apart from the difference in their color, the molecules in the crystals also differ in their intramolecular O?H???O and O?H???Cl hydrogen bonds. Time‐dependent DFT calculations reveal the role of the various types of hydrogen bonds in controlling the color of the polymorphs. Mechanistic pathways that lead to such transformations in the crystal are elucidated by solid‐state dispersion‐corrected DFT studies. Relative stabilities of the various polymorphs rationalize the experimentally observed transformations between them. Calculations reveal that the minimum‐energy pathway for the conversion of the Y form to a W form is through stepwise disrotatory motion of the two ?OH groups through a hybrid intermediate having one intramolecular O?H???O and one O?H???Cl bond. The LY form is shown to exist on the higher‐energy pathway involving a concerted Y→W transformation.     

Experimental and Theoretical Studies on Arene‐Bridged Metal–Metal‐Bonded Dimolybdenum Complexes

The bis(hydride) dimolybdenum complex, [Mo₂(H)₂{HC(N‐2,6‐iPr₂C₆H₃)₂}₂(thf)₂], 2 , which possesses a quadruply bonded Mo₂^II core, undergoes light‐induced (365 nm) reductive elimination of H₂ and arene coordination in benzene and toluene solutions, with formation of the Mo^I₂ complexes [Mo₂{HC(N‐2,6‐iPr₂C₆H₃)₂}₂(arene)], 3?C₆H₆ and 3?C₆H₅Me , respectively. The analogous C₆H₅OMe, p‐C₆H₄Me₂, C₆H₅F, and p‐C₆H₄F₂ derivatives have also been prepared by thermal or photochemical methods, which nevertheless employ different Mo₂ complex precursors. X‐ray crystallography and solution NMR studies demonstrate that the molecule of the arene bridges the molybdenum atoms of the Mo^I₂ core, coordinating to each in an η² fashion. In solution, the arene rotates fast on the NMR timescale around the Mo₂‐arene axis. For the substituted aromatic hydrocarbons, the NMR data are consistent with the existence of a major rotamer in which the metal atoms are coordinated to the more electron‐rich C?C bonds.     

Highly Efficient Chemical Process To Convert Mucic Acid into Adipic Acid and DFT Studies of the Mechanism of the Rhenium‐Catalyzed Deoxydehydration

The production of bulk chemicals and fuels from renewable bio‐based feedstocks is of significant importance for the sustainability of human society. Adipic acid, as one of the most‐demanded drop‐in chemicals from a bioresource, is used primarily for the large‐volume production of nylon‐6,6 polyamide. It is highly desirable to develop sustainable and environmentally friendly processes for the production of adipic acid from renewable feedstocks. However, currently there is no suitable bio‐adipic acid synthesis process. Demonstrated herein is the highly efficient synthetic protocol for the conversion of mucic acid into adipic acid through the oxorhenium‐complex‐catalyzed deoxydehydration (DODH) reaction and subsequent Pt/C‐catalyzed transfer hydrogenation. Quantitative yields (99 %) were achieved for the conversion of mucic acid into muconic acid and adipic acid either in separate sequences or in a one‐step process.     

Bis(phosphinimino)methanide Borohydride Complexes of the Rare‐Earth Elements as Initiators for the Ring‐Opening Polymerization of ε‐Caprolactone: Combined Experimental and Computational Investigations

Rare‐earth‐metal borohydrides are known to be efficient catalysts for the polymerization of apolar and polar monomers. The bis‐borohydrides [{CH(PPh₂NSiMe₃)₂}La(BH₄)₂(THF)] and [{CH(PPh₂NSiMe₃)₂}Ln(BH₄)₂] (Ln=Y, Lu) have been synthesized by two different synthetic routes. The lanthanum and the lutetium complexes were prepared from [Ln(BH₄)₃(THF)₃] and K{CH(PPh₂NSiMe₃)₂}, whereas the yttrium analogue was obtained from in situ prepared [{CH(PPh₂NSiMe₃)₂}YCl₂]₂ and NaBH₄. All new compounds were characterized by standard analytical/spectroscopic techniques, and the solid‐state structures were established by single‐crystal X‐ray diffraction. The ring‐opening polymerization (ROP) of ε‐caprolactone initiated by [{CH(PPh₂NSiMe₃)₂}La(BH₄)₂(THF)] and [{CH(PPh₂NSiMe₃)₂}Ln(BH₄)₂] (Ln=Y, Lu) was studied. At 0 °C the molar mass distributions determined were the narrowest values (M?_w/M?_n=1.06–1.11) ever obtained for the ROP of ε‐caprolactone initiated by rare‐earth‐metal borohydride species. DFT investigations of the reaction mechanism indicate that this type of complex reacts in an unprecedented manner with the first B? H activation being achieved within two steps. This particularity has been attributed to the metallic fragment based on the natural bond order analysis.     

Kinetic Stabilization and Reactivity of π Single‐Bonded Species: Effect of the Alkoxy Group on the Lifetime of Singlet 2,2‐Dialkoxy‐1,3‐diphenyloctahydropentalene‐1,3‐diyls

Kinetic stabilization and reactivity of π single‐bonded species have been investigated in detail by generating a series of singlet 2,2‐dialkoxy‐1,3‐diphenyloctahydropentalene‐1,3‐diyls ( DR s). The lifetime at 293 K in benzene was found to increase when the carbon chain length of the alkoxy groups was increased; 292 ns ( DRb ; OR=OR′=OCH₃) <880 ns ( DRc ; OR=OR′=OC₂H₅) <1899 ns ( DRd ; OR=OR′=OC₃H₇) ≈2292 ns ( DRe ; OR=OR′=OC₆H₁₃) ≈2146 ns ( DRf ; OR=OR′=OC₁₀H₂₁). DRh (OR=OC₃H₇, OR′=OCH₃; 935 ns) with the mixed‐acetal moiety is a longer‐lived species than another diastereomer DRg (OR=OCH₃, OR′=OC₃H₇; 516 ns). Activation parameters determined for the first‐order decay process reveal that the enthalpy factor plays a crucial role in determining the energy barrier of the ring‐closing reaction, that is, from the π‐bonding to the σ‐bonding compounds. Computational studies using density functional theory provided more insight into the structures of the singlet species with π single‐bonded character and the transition states for the ring‐closing reaction, thereby clarifying the role of the alkoxy group on the lifetime and the stereoselectivity of the ring‐closing reaction.     

1,4‐Addition of Bis(iodozincio)methane to α,β‐Unsaturated Ketones: Chemical and Theoretical/Computational Studies

1,4‐Addition of bis(iodozincio)methane to simple α,β‐unsaturated ketones does not proceed well; the reaction is slightly endothermic according to DFT calculations. In the presence of chlorotrimethylsilane, the reaction proceeded efficiently to afford a silyl enol ether of β‐zinciomethyl ketone. The C? Zn bond of the silyl enol ether could be used in a cross‐coupling reaction to form another C? C bond in a one‐pot reaction. In contrast, 1,4‐addition of the dizinc reagent to enones carrying an acyloxy group proceeded very efficiently without any additive. In this case, the product was a 1,3‐diketone, which was generated in a novel tandem reaction. A theoretical/computational study indicates that the whole reaction pathway is exothermic, and that two zinc atoms of bis(iodozincio)methane accelerate each step cooperatively as effective Lewis acids.     

A computational study of substituent effects on the stability and geometry of carbazole‐pyridine complexes

Hydrogen bonding between carbazole and pyridine is known to quench fluorescence emission of carbazole. Three carbazolopyridinophanes—compounds composed of carbazole and pyridine subunits such that an intramolecular hydrogen bond may exist between them—have been pursued as reversible fluorescent sensors that detect given analytes through fluorescence restoration. However, these sensors exhibit background fluorescence believed to be related to the proportion of non‐hydrogen‐bonded conformers present. In this computational investigation, the potential energy surfaces of various hydrogen‐bonded carbazole:pyridine complexes are investigated using density functional theory with the intent of explaining the observed background fluorescence for the carbazolopyridinophanes. The results indicate carbazolopyridinophane conformers most resembling the geometry of their corresponding free carbazole:pyridine complexes exhibit the least background fluorescence.     

Spectroscopic and Computational Insight into the Intermolecular Interactions between Zwitter‐Type Ionic Liquids and Water Molecules

Geometric and conformational changes of zwitter‐type ionic liquids (ZILs) due to hydrogen‐bonding interactions with water molecules are investigated by density functional theory (DFT), two‐dimensional IR correlation spectroscopy (2D IR COS), and pulsed‐gradient spin‐echo NMR (PGSE NMR). Simulation results indicate that molecular structures in the optimized states are strongly influenced by hydrogen bonding of water molecules with the sulfonate group or imidazolium and pyrrolidinium rings of 3‐(1‐methyl‐3‐imidazolio)propanesulfonate ( 1 ) and 3‐(1‐methyl‐1‐pyrrolidinio)propanesulfonate ( 2 ), respectively. Concentration‐dependent 2D IR COS reveals kinetic conformational changes of the two ZIL–H₂O systems attributable to intermolecular interactions, as well as the interactions of sulfonate groups and imidazolium or pyrrolidinium rings with water molecules. The dramatic changes in the ¹H self‐diffusion coefficients elucidate the formation of proton‐conduction pathways consisting of ZIL networks. In ZIL domains, protons are transferred by a Grotthuss‐type mechanism through formation, breaking, and restructuring of bonds between ZILs and H₂O, leading to an energetically favorable state. The simulation and experimental investigations delineated herein provide a perspective to understanding the interactions with water from an academic point of view as well as to designing ILs with desired properties from the viewpoint of applications.     

Preorganized Anion Traps for Exploiting Anion–π Interactions: An Experimental and Computational Study

1,3‐Bis(pentafluorophenyl‐imino)isoindoline (A^F) and 3,6‐di‐tert‐butyl‐1,8‐bis(pentafluorophenyl)‐9H‐carbazole (B^F) have been designed as preorganized anion receptors that exploit anion–π interactions, and their ability to bind chloride and bromide in various solvents has been evaluated. Both receptors A^F and B^F are neutral but provide a central NH hydrogen bond that directs the halide anion into a preorganized clamp of the two electron‐deficient appended arenes. Crystal structures of host–guest complexes of A^F with DMSO, Cl^?, or Br^? (A^F:DMSO, A^F:Cl^?, and ${{\rm A}{{{\rm F}\hfill \atop 2\hfill}}}$ :Br^?) reveal that in all cases the guest is located in the cleft between the perfluorinated flaps, but NMR spectroscopy shows a more complex situation in solution because of E,Z/Z,Z isomerism of the host. In the case of the more rigid receptor B^F, Job plots evidence 1:1 complex formation with Cl^? and Br^?, and association constants up to 960 M ^?1 have been determined depending on the solvent. Crystal structures of B^F and B^F:DMSO visualize the distinct preorganization of the host for anion–π interactions. The reference compounds 1,3‐bis(2‐pyrimidylimino)isoindoline (A^N) and 3,6‐di‐tert‐butyl‐1,8‐diphenyl‐9H‐carbazole (B^H), which lack the perfluorinated flaps, do not show any indication of anion binding under the same conditions. A detailed computational analysis of the receptors A^F and B^F and their host–guest complexes with Cl^? or Br^? was carried out to quantify the interactions in play. Local correlation methods were applied, allowing for a decomposition of the ring–anion interactions. The latter were found to contribute significantly to the stabilization of these complexes (about half of the total energy). Compounds A^F and B^F represent rare examples of neutral receptors that are well preorganized for exploiting anion–π interactions, and rare examples of receptors for which the individual contributions to the binding energy have been quantified.