Vibrational investigation of 1-cyclopentylpiperazine: A combined experimental and theoretical study

FT-IR and Raman spectra of 1-cyclopentylpiperazine(1cppp)have been experimentally examined in the region of 4000–200cm-1.The optimized geometric parameters,conformational equilibria,normal mode frequencies and corresponding vibrational assignments of 1cppp(C9H18N2)are theoretically examined by means of B3LYP hybrid density functional theory(DFT)method together with 6-31++G(d,p)basis set.On the basis of potential energy distribution(PED)reliable vibrational assignments have been made and the thermodynamics functions,highest occupied and lowest unoccupied molecular orbitals(HOMO and LUMO)of 1cppp have been predicted.Calculations are employed for four different conformations in C1 and Cs point groups of 1cppp in gas phase.Comparison between the experimental and theoretical results indicates that B3LYP method is able to provide satisfactory results for predicting vibrational frequencies and the structural parameters,vibrational frequencies and assignments.Furthermore,C1(equatorial-axial)point group has been found as the most stable conformer of 1cppp.     

Ammonia adsorption on the C30B15N15 heterofullerene: DFT study of nuclear magnetic shielding and electric field gradient tensors of N and B nuclei

Ammonia adsorption on the external surface of C₃₀B₁₅N₁₅ heterofullerene was studied using density functional calculations. Three models of the ammonia-attached C₃₀B₁₅N₁₅ together with the perfect model were optimized at the B3LYP/6-31G^? level. The optimization process reveals that dramatic influences occurred for the geometrical structure of C₃₀B₁₅N₁₅ after ammonia adsorption; the B atom relaxes outwardly and consequently the heterofullerene distorts from the spherical form in the adsorption sites. The chemical shielding (CS) tensors and nuclear quadrupole coupling constants of B and N nuclei were calculated at the B3LYP/6-311G^** level. Our calculations reveal that the B atom is chemically bonded to NH₃ molecule. The B atom in the NH₃-attached form has the largest chemical shielding isotropic (CSI) value among the other boron nuclei. The C_Q parameters of B nuclei at the interaction sites are significantly decreased after ammonia adsorption.     

Molecular structure,experimental and theoretical 1H and 13C NMR chemical shift assignment of cyclic and acyclic α,β‐unsaturated esters

The experimental ¹H and ¹³C NMR spectra of 13 phenyl cinnamates and four 4‐methylcoumarins were investigated and their chemical shifts assigned on the basis of the two‐dimensional spectra. For the unsubstituted cinnamic acid phenyl ester, optimized molecular structures were calculated at a B3LYP/6‐311++G(d,p) level of theory. ¹H and ¹³C NMR chemical shifts were also calculated with the GIAO method at the B3LYP/6‐311 + G(2d,p) level of theory. The comparison between experimental and calculated NMR chemical shift suggests that the experimental spectra are formed from the superposition spectra of the two lowest energy conformers of the compound in solution. The most stable s‐cis configuration found in our studies is also the conformation adopted for a related phenyl cinnamate in solid state. The experimental results were analyzed in terms of the substituent effects. Copyright © 2013 John Wiley & Sons, Ltd.     

A simple theoretical treatment of quadrupolar effects on magic-angle-spinning solid-state NMR spectra of spin-1/2 nuclei in the limit of large quadrupole coupling constants

A simple approach is discussed for studying the effect of quadrupolar nuclei on the magic-angle-spinning solid-state NMR lines of spin-1/2 nuclei in the limit of large quadrupole coupling constants. Equations are derived both for the isotropic shifts and the Pake-like powder patterns for any quadrupolar spin and for arbitrary orientations of the internuclear vector with respect to the unique axis of an axially symmetric quadrupole tensor. First-order effects due to a small Zeeman perturbation on these lines are explored, as well as deviations from axial symmetry in the electric field gradient when S = 3/2 quadrupolar nuclei are involved. Spectral parameters likely to be observed in the case of coupling between ³¹P and ²⁰¹Hg are also discussed.     

Comparison of theoretical and experimental studies of infrared and microwave spectral data for 5- and 6-membered ring heterocycles: The rotation constants, centrifugal distortion and vibration rotation constants

A systematic study of the rotation constants, vibration-rotation constants and quartic centrifugal distortion constants has been performed for furan, pyrrole, thiophene, both oxazoles and thiazoles, 1,2,4- and 1,2,5-oxa- and -thiadiazoles, 1,2,5-selenadiazole, and several 6-membered heterocycles (azines). The main study used cc-pVTZ basis sets. There is a very close correlation between the observed constants above and those calculated, especially using the cc-pVTZ + B3LYP procedures; some trends in these appear on substitution of HC by N in the azoles. This strong correlation between experimental values and this theoretical procedure is also apparent with vibrational differences in rotation constants, all over large numbers of measured values. However, a small number of calculated values do not correlate well with experiment; this may be a result of some of the experimental values being subject to resonance perturbations not included in the calculations. In general, a TZ2P basis set with B3LYP methodology, and cc-pVTZ results with MP2 methodology, lead to correlations of similar quality, but the latter require markedly more computing power. The present study draws attention to a tetrad in the IR spectrum of 1,2,5-oxadiazole, where further analysis is necessary.     

Raman study of a photochromic diarylethene molecule: a combined theoretical and experimental study

In this paper, the photochromic reaction of the 1,2‐bis(5′‐ethoxy‐2′‐(2″‐pyridyl) thiazolyl) compound (named DE) was studied by ultraviolet–visible absorption and various Raman spectroscopies associated with density functional theory calculations. To explain the growth of the visible absorption spectrum when the compound is irradiated with ultraviolet light, we suggest the existence of several conformations of the colored form. We also studied the vibrational spectroscopic properties of DE in different conditions such as powder, thin solid film, or in gold nanorods colloidal solutions. This compound is found photochromic in all these conditions. The theoretical Raman spectra of the open and closed forms reproduce fairly well the experimental data and help the complete assignment of the observed bands. Copyright © 2013 John Wiley & Sons, Ltd.     

Computational studies of the cone and 1,2,3 alternate calix[6]arene bis‐crown‐4 isomers: structures,NMR shifts,atomic charges,and steric compression

The cone and 1,2,3 alternate isomers of calix[6]arene bis‐crown‐4 were investigated computationally. Structural optimizations, energies, bond distances, and Mulliken charges were calculated by the application of the B3LYP/6‐31g(d) method/basis, followed by NMR calculations via both B3LYP/6‐31g(d) and HF/6‐31g(d). Calculations were completed at three different levels of imposed symmetry, and two calculations investigated the chloroform solvent effects. Better NMR results were obtained from HF/6‐31g(d) calculations that did not impose molecular symmetry constraints. Consideration of solvent effects improved ground state energies, but other improvements were minimal and not significant enough to justify the added computational expense of solvent calculations. Overall results are consistent with known experimental assignments and were valuable for assigning previously unknown NMR peaks. Net charges, electrostatic forces, and local dipoles – but not bond lengths – are strongly correlated to spectroscopic manifestations of steric compression. Copyright © 2009 John Wiley & Sons, Ltd.     

NMR study of YP and YPO4 as 2-qubits quantum computers

The ³¹P-NMR experiments in YP and YPO₄ as 2-qubits quantum computers were performed at room temperature under magnetic fields of 6.3 and 11.75 T with a coherent type pulsed FT-NMR spectrometer. The full width at half of the maximum intensity of NMR spectrum for ³¹P is compared with the second moment caused by the dipolar field. The obtained spin–lattice relaxation times T₁ of 1.2 and 320 s for the P nuclei in YP and YPO₄, respectively, suggest both compounds have the advantage of increasing the numbers of quantum computing operations.     

An electron paramagnetic resonance and density-functional theory study on the methyl isotropic hyperfine coupling constants in gamma-irradiated 2,6-di-tert-butyl-4-methylphenol

Single crystal of gammairradiated 2,6-di-tert-butyl-4-methylphenol (BHT) was investigated using an electron paramagnetic resonance (EPR) technique at different orientations in the magnetic field at room temperatures. Taking into consideration the chemical structure and the experimental spectra of the irradiated single crystal of BHT, we assumed that one phenoxyltype paramagnetic species was produced having an unpaired electron localized at the methyl fragment side of the phenyl ring. Depending on this assumption, one possible radical was modeled using the B3LYP/6-311+G(d) level of density-functional theory. EPR parameters were calculated for these modeled radical using the B3LYP/TZVP and B3LYP/EPR-III level. The averaged value of isotropic hydrogen hyperfine coupling constants of rotating methyl functional group of phenoxyl radical is calculated for the first time. Theoretically calculated values of the modeled radical are in reasonably good agreement with the experimental data determined from the spectra (differences in averaged coupling constant values smaller than 5%, and differences in isotropic g values fall into 1 ppt).     

Molecular interactions in methylimidazolium tetrafluoroborate ionic liquid ([Mim][BF4]): Structures, binding energies, topological properties and NMR one- and two bonds spin-spin coupling constants

Molecular interactions in methylimidazolium tetrafluoroborate ionic liquid ([Mim⁺][BF₄⁻]) have been investigated using B3LYP, B3PW91 and MP2 methods with a wide range of basis sets. Binding energy, topological properties of electron density, charge transfer, nucleus-independent chemical shift (NICS) and NMR one- and two bonds spin-spin coupling constants were calculated. With five preferential binding sites in the vicinity of the Mim⁺ ring, five ion pairs (A-E) with three intermolecular hydrogen bonds were found on the potential energy surface. The most stable ion pairs are formed via N-H and C-H bonds of Mim⁺ and B-F bonds of BF₄⁻. Ion pairs have electronic binding energies (BEs) in the range of − 335.6 to − 402.9 kJ/mol at MP2/6-311++G(2d,2p) level and − 328.1 to − 383.6 kJ/mol at B3LYP/AUG-cc-pVTZ level. NBO analysis confirms that the charge transfer takes place from BF₄⁻ to Mim⁺. The NICS values reveal the aromaticity of imidazole ring. The results show a correlation between absolute value of ^1hJ(H?F) and electron density at H?F bond critical point.     

C, N CPMAS NMR and GIAO DFT calculations of stereoisomeric oxindole alkaloids from Cat's Claw (Uncaria tomentosa)

Oxindole alkaloids, isolated from the bark of Uncaria tomentosa [Willd. ex Schult.] Rubiaceae, are considered to be responsible for the biological activity of this herb. Five pentacyclic and two tetracyclic alkaloids were studied by solid-state NMR and theoretical GIAO DFT methods. The ¹³C and ¹⁵N CPMAS NMR spectra were recorded for mitraphylline, isomitraphylline, pteropodine (uncarine C), isopteropodine (uncarine E), speciophylline (uncarine D), rhynchophylline and isorhynchophylline. Theoretical GIAO DFT calculations of shielding constants provide arguments for identification of asymmetric centers and proper assignment of NMR spectra. These alkaloids are 7R/7S and 20R/20S stereoisomeric pairs. Based on the ¹³C CP MAS chemical shifts the 7S alkaloids (δ C3 70–71 ppm) can be easily and conveniently distinguished from 7R (δC3 74.5–74.9 ppm), also 20R (δC20 41.3–41.7 ppm) from the 20S (δC20 36.3–38.3 ppm). The epiallo-type isomer (3R, 20S) of speciophylline is characterized by a larger ¹⁵N MAS chemical shift of N4 (64.6 ppm) than the allo-type (3S, 20S) of isopteropodine (δN4 53.3 ppm). ¹⁵N MAS chemical shifts of N1–H in pentacyclic alkaloids are within 131.9–140.4 ppm.     

13C NMR Chemical Shifts and CH Coupling Constants of Substituted 4-Ylidenebutenolides

The ¹³C chemical shifts and CH coupling constants for 6 substituted 4-ylidenebutenolides are reported. The CH coupling constants are useful in helping to determine the stereochemistry of the substituted exocyclic double bond.     

A novel Raman spectroscopic approach to identify polymorphism in leflunomide: a combined experimental and theoretical study

Polymorphism is an important characteristic which affects the activity, solubility and other physical properties of a compound and can be induced by varying temperature, pressure and solvent. The presence and conversion of α to β polymorphic forms of an anti‐rheumatic drug leflunomide have been studied by temperature‐dependent and in situ Raman observations. Both α and β polymorphs were found to co‐exist in the temperature interval 367–372 K. The α form alone exists below 367 K and the β form alone above 373 K. The CO stretching band clearly demonstrates the α → β conversion because of breaking of N–H···O bond and formation of N–H···N bond. On cooling the Raman spectra suggest the irreversibility of this conversion. Thermodynamic stability, crystal parameters and surface morphology of both forms in the leflunomide powder used for the present study have been verified by differential scanning calorimetry, X‐ray powder diffraction and scanning electron microscopy. Copyright © 2015 John Wiley & Sons, Ltd.     

Piperidine‐appended imidazolium ionic liquids as task‐specific catalysts: computational study,synthesis, and multinuclear NMR

Imidazolium ionic liquids (IMILs) with a piperidine moiety appended via variable length methylene spacers (with n = 1–4) were studied computationally to assess their potential to act as internal base for N‐heterocyclic carbene (NHC) generation. Proton transfer energies computed by B3LYP/6‐311+G(2d,p) were least endothermic for the basic‐IL with n = 3, whose optimized structure showed the shortest C₂‐H‐‐‐‐N(piperidine) distance. Inclusion of counter anion (Cl or NTf₂) caused dramatic conformational changes to enable close contact between the acidic C₂‐H and the anions. To examine the prospect for internal C₂‐H‐‐‐‐N coordination, multinuclear NMR data (¹H, ¹⁵N, and ¹³C) were computed by gauge independent atomic orbitals–density functional theory (GIAO‐DFT) in the gas phase and in several solvents by the PCM method for comparison with the experimental NMR data for the basic ILs (with n = 2–4) synthesized in the laboratory. These studies indicate that interactions with solvent and counter ion are dominant forces that could disrupt internal C₂‐H‐‐‐‐N coordination/proton transfer, making carbene generation from these basic‐ILs unlikely without an added external base. Therefore, the piperidine‐appended IMILs appear suitable for application as dual solvent/base in organic/organometallic transformations that require the use of mild base, without the necessity to alkylate at C‐2 to prevent N‐heterocyclic carbene formation. Copyright © 2016 John Wiley & Sons, Ltd.     

The influence of CH … π interaction on coupling constants across N … H–F hydrogen bond in a substituted T-shaped configuration: a theoretical study

For studying the influence of CH?…?π interaction on coupling constants across N?…?H–F hydrogen bond in a substituted T-shaped configuration, X-benzene⊥(FH?…?pyrazine?…?HF) complexes are chosen as a working model. NMR calculations are performed at B3LYP/6-311++G(d,p) and PBE0/6-311++G(d,p) levels. Here, correlations between energetic, geometrical and topological parameters and coupling constants are investigated. The results indicate that direct correlations exist between strength of N?…?H hydrogen bond, electron-donating power of substituents and |^2hJ_N?F|. Also, |^2hJ_N?F| increases as cooperative and synergistic energies become more negative. These behaviours are reversed for ^1hJ_N?H. Due to contradictory behaviours of FC and PSO terms, an irregular trend is observed for ¹J_H?F.     

Relative wavefunctions, vertex functions and coupling constants for the virtual decay of 4He

The d + d, t + p and h + n relative wavefunctions and their asymptotic normalizations are considered in the framework of the generator coordinate method (GCM) and compared with ATMS (amalgamation of two-body correlation into multiple scattering processes) method which used the realistic Reid soft core interaction. The asymptotic normalization of relative wavefunctions provide various coupling constants, the cluster probability amplitude (the so-called Z ^1/2-factor) and matter RMS radii. These wavefunctions are also used to obtain ⁴He − d − d, ⁴He − t − p and ⁴He − h − n vertex functions in the virtual decay of ⁴He. The extrapolation of vertex functions for negative values of q ² upto the corresponding poles provide the vertex constants which are comparable with other estimates. It is noticed that in GCM the coupling constants C ² for ⁴He − d − d vertex is less than 2 as has been obtained in the forward dispersion relation technique.     

Gallium doped in armchair and zigzag models of boron phosphide nanotubes (BPNTs): A NMR study

The electrical properties and NMR parameters of the pristine and Ga-doped structures of two representative (8, 0) zigzag and (4, 4) armchair of boron phosphide nanotubes (BPNTs) have been investigated. The structural geometries of above nanotubes have been allowed to relax by optimization and then the isotropic and anisotropic chemical shielding parameters (CSI and CSA) of ¹¹B and ³¹P have been calculated based on DFT theory. The results reveal that the influence of Ga-doping was more significant on the geometries of the zigzag model than the armchair one. The difference of band gap energies between the pristine and Ga-doped armchair BPNTs was larger than the zigzag model. Significant differences of NMR parameters of those nuclei directly contributed to the Ga-doping atoms have been observed.     

Dynamic 1H NMR investigation along with a theoretical study around the C–C and C = C bonds in a particular phosphorus ylide

In the present work, the dynamic ¹H NMR effects were investigated at variable temperatures within a particular phosphorus ylide involving a 2‐benzoxazolinone around the carbon–carbon single bond and also partial carbon–carbon double bond in two Z‐ and E‐rotational isomers. Activation and kinetic parameters including ΔH^≠, ΔG^≠, ΔS^≠ and E_a were determined in accord with the dynamic ¹H NMR data for three rotational processes. In addition, theoretical studies based upon rotation around the same bonds were investigated using ab initio and DFT methods at the HF/6‐31G(d,p) and B3LYP/6‐31G(d,p) levels of theory. Theoretical activation and kinetic parameters including ΔH^≠, ΔG^≠, ΔS^≠ and E_a were calculated at 298 K and experimental temperatures for five rotational processes. These results (experimental and theoretical), taken together, indicate that the rotational energy barrier around the C = C double bond was considerably high and the observation of the two rotational isomers was impossible (seen as a single isomer) at the high temperatures, in this case rotation around the C = C bond was too fast on the NMR time scale. When the temperature was relatively low, the rate of rotation was sufficiently slow; therefore, observation of the two Z‐ and E‐isomers was possible. In addition, calculations at the HF/6‐31G(d,p) level of theory showed very favorable results in agreement with the experimental data on rotation around the C = C bond. While, B3LYP level using the 6‐31G(d,p) basis set was provided the reasonable data for the restricted rotations around the C–C and C–N single bond. Copyright © 2012 John Wiley & Sons, Ltd.     

H NMR study of N(CH3)4H(ClF2CCOO)2

The proton spin–lattice relaxation times and ¹H NMR second moments were measured over a wide range of temperature. The results were compared with those of the ¹⁹F NMR relaxation that we obtained earlier. For both nuclear species, the evolution of the longitudinal magnetizations with time is observed to be strongly bi-exponential and were in good quantitative agreement with the cross-relaxation theory.