Exchange of Methyl‐ and Azobenzene‐Terminated Alkanethiols on Polycrystalline Gold Studied by Tip‐Enhanced Raman Mapping

Mixed thiol self‐assembled monolayers (SAMs) presenting methyl and azobenzene head groups were prepared by chemical substitution from the original single‐component n‐decanethiol or [4‐(phenylazo)phenoxy]hexane‐1‐thiol SAMs on polycrystalline gold substrates. Static contact‐angle measurements were carried out to confirm a change in the hydrophobicity of the functionalized surfaces following the exchange reaction. The mixed SAMs presented contact‐angle values between those of the more hydrophobic n‐decanethiol and the more hydrophilic [4‐(phenylazo)phenoxy]hexane‐1‐thiol single‐component SAMs. By means of tip‐enhanced Raman spectroscopy (TERS) mapping experiments, it was possible to highlight that molecular replacement takes place easily and first at grain boundaries: for two different mixed SAM compositions, TERS point‐by‐point maps with <50 nm step sizes showed different spectral signatures in correspondence to the grain boundaries. An example of the substitution extending beyond grain boundaries and affecting flat areas of the gold surface is also shown.     

Modification of Electrode Surfaces by Self‐Assembled Monolayers of Thiol‐Terminated Oligo(Phenyleneethynylene)s

The wire‐like properties of four S‐(4‐{2‐[4‐(2‐phenylethynyl)phenyl]ethynyl}phenyl) thioacetate derivatives, PhC≡CC₆H₄C≡CC₆H₄SAc ( 1 ), H₂NC₆H₄C≡CC₆H₄C≡CC₆H₄SAc ( 2 ), PhC≡CC₆H₂(OMe)₂C≡CC₆H₄SAc ( 3 ) and AcSC₆H₄C≡CC₆H₄C≡CC₆H₄SAc ( 4 ) (Figure 1 ), all of which possess a high degree of conjugation along the oligo(phenyleneethynylene) (OPE) backbone, were investigated as self‐assembled monolayers (SAMs) on gold and platinum electrodes by cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS). The redox probe [Fe(CN)₆]₄^? was used in both the CV and impedance experiments. The results indicate that the thiolates derived from thioacetate‐protected precursor molecules 1 and 2 form well‐ordered monolayers on a gold electrode, whereas SAMs derived from 3 and 4 exhibit randomly distributed pinholes. The electron tunnelling resistance and fractional coverage of SAMs of all four compounds were examined using electron tunnelling theory. The analysis of the results reveal that the well‐ordered SAMs of 1 and 2 exhibit higher charge‐transfer resistance in comparison to the defect‐ridden SAMs of 3 and 4 . The additional steric bulk offered by the methoxy groups in 3 is likely to prevent efficient packing within the SAM, leading to a microelectrode behaviour, when assembled on a gold electrode surface. The protected dithiol derivative 4 probably binds to the surface through both terminal groups which prevents dense packing and leads to the formation of a monolayer with randomly distributed pinholes. Atomic force microscopy (AFM) was used to examine the morphology of the monolayers, and height images gave root‐mean‐square (RMS) roughness′s which are in agreement with the proposed SAM structures.     

Electrochemical Studies of Thiol Self‐Assembled Monolayers at a Heated Gold‐Wire Microelectrode

Mercaptoundecanoic acid (MUA) and glutathione (GSH) self‐assembled monolayers were prepared on gold‐ wire microelectrode. Cyclic voltammetry was used to investigate the influence of temperature on electrochemical behaviors of Fe(CN)₆^3?/4? and Ru(NH₃)₆^3+/2+ at these SAMs modified electrodes in aqueous solution. It is found that temperature shows great influence on electron transfer (ET) and mass transport (MT) for the two SAMs modified electrodes and the influence of temperature depends on the charge properties of the redox couples and terminal groups of SAMs and the structure of the monolayer on gold surface. The temperature can greatly increase MT rate of Fe(CN)₆^3?/4? at both MUA and GSH modified electrodes. However, the increased MT rate doesn't have any effect on the CV's for Fe(CN)₆^3?/4? /MUA system. For Ru(NH₃)₆^3+/2+ , temperature can greatly improve the electrochemical reaction in both MUA and GSH modified electrodes, which is ascribed to temperature‐induced diffusion and convection and the electrostatic interaction between Ru(NH₃)₆^3+/2+ and negatively charged carboxyl groups on the electrode surface.     

Electrochemical Deposition onto Self‐Assembled Monolayers: New Insights into Micro‐ and Nanofabrication

Pattern transfer with high resolution is a frontier topic in the emerging field of nanotechnologies. Electrochemical molding is a possible route for nanopatterning metal, alloys and oxide surfaces with high resolution in a simple and inexpensive way. This method involves electrodeposition onto a conducting master covered by a self‐assembled alkanethiolate monolayer (SAMs). This molecular film enables direct surface–relief pattern transfer from the conducting master to the inner face of the electrodeposit, and also allows an easy release of the electrodeposited film due their excellent anti‐adherent properties. Replicas of the original conductive master can be also obtained by a simple two‐step procedure. SAM quality and stability under electrodeposition conditions combined with the formation of smooth electrodeposits are crucial to obtain high‐quality pattern transfer with sub‐50 nm resolution.     

Molecular Suction Pads: Self‐Assembled Monolayers of Subphthalocyaninatoboron Complexes on Gold

Subphthalocyaninatoboron complexes with six long‐chain alkylthio substituents in their periphery are applicable for the formation of self‐assembled monolayers (SAMs) on gold. Such films are prepared from solution with the axially chlorido‐substituted derivatives and characterised by near‐edge X‐ray absorption fine structure (NEXAFS) spectroscopy, X‐ray photoelectron spectroscopy (XPS) and time‐of‐flight secondary ion mass spectrometry (ToF‐SIMS). The results are in accord with the formation of SAMs assembled by the chemisorption of both covalently bound thiolate‐type as well as coordinatively bound thioether units. The adsorbate molecules adopt an essentially flat adsorption geometry on the substrate, resembling a suction pad on a surface.     

Robust Self‐Assembled Monolayers of RuII and OsII Polypyridines on Gold Surfaces: Exploring New Potentials

Functional monolayers : Ru^II and Os^II bis‐terpyridine complexes have been attached through a piperazine‐supported dithiocarbamate to a gold substrate (see picture). The robust tether, and the favourable reduction in oxidation potential induced by the electron‐rich piperazine result in self‐assembled monolayers with excellent reversible redox behaviour and exceptional stability.

     

Self‐Assembled Selenium Monolayers: From Nanotechnology to Materials Science and Adaptive Catalysis

Self‐assembled monolayers (SAMs) of selenium have emerged into a rapidly developing field of nanotechnology with several promising opportunities in materials chemistry and catalysis. Comparison between sulfur‐based self‐assembled monolayers and newly developed selenium‐based monolayers reveal outstanding complimentary features on surface chemistry and highlighted the key role of the headgroup element. Diverse structural properties and reactivity of organosulfur and organoselenium groups on the surface provide flexible frameworks to create new generations of materials and adaptive catalysts with unprecedented selectivity. Important practical utility of adaptive catalytic systems deals with development of sustainable technologies and industrial processes based on natural resources. Independent development of nanotechnology, materials science and catalysis has led to the discovery of common fundamental principles of the surface chemistry of chalcogen compounds.     

On the Hopping Efficiency of Nanoparticles in the Electron Transfer across Self‐Assembled Monolayers

Redox reactions of solvated molecular species at gold‐electrode surfaces modified by electrochemically inactive self‐assembled molecular monolayers (SAMs) are found to be activated by introducing Au nanoparticles (NPs) covalently bound to the SAM to form a reactive Au–alkanedithiol–NP–molecule hybrid entity. The NP appears to relay long‐range electron transfer (ET) so that the rate of the redox reaction may be as efficient as directly on a bare Au electrode, even though the ET distance is increased by several nanometers. In this study, we have employed a fast redox reaction of surface‐confined 6‐(ferrocenyl) hexanethiol molecules and NPs of Au, Pt and Pd to address the dependence of the rate of ET through the hybrid on the particular NP metal. Cyclic voltammograms show an increasing difference in the peak‐to‐peak separation for NPs in the order Au<Pt<Pd, especially when the length of the alkanedithiol increases from octanedithiol to decanedithiol. The corresponding apparent rate constants, k_app, for decanedithiol are 1170, 360 and 14 s^?1 for NPs of Au, Pt and Pd, respectively, indicating that the efficiency of NP mediation of the ET clearly depends on the nature of the NP. Based on a preliminary analysis rooted in interfacial electrochemical ET theory, combined with a simplified two‐step view of the NP coupling to the electrode and the molecule, this observation is referred to the density of electronic states of the NPs, reflected in a broadening of the molecular electron/NP bridge group levels and energy‐gap differences between the Fermi levels of the different metals.     

Self‐assembled Monolayers of Alkylphosphonic Acids on Aluminum Oxide Surfaces – A Theoretical Study

Density‐functional based calculations were used to investigate self‐assembled monolayers of different alkylphosphonic acids on corundum α‐Al₂O₃ (0001), bayerite β‐Al(OH)₃ (001) and boehmite γ‐AlOOH (010) surface models. Mono‐, bi‐, and tridentate adsorption modes were considered. In addition, the organization of single adsorbed molecules was compared to the organization at full surface coverage. The height (thickness) of the self‐assembled monolayers is always shorter than the length of the phosphonic acid molecules due to tilting of the alkyl chains. Tilt angles at full surface coverage are very similar to the tilt angle of a single adsorbed molecule, which indicates that the density of the self‐assembled monolayers is limited by the density of adsorption sites. The lateral interactions between alkyl chains are evidenced by small torsions of the adsorbed molecules, which may serve to minimize the repulsion forces between interchain hydrogen atoms. Similar tilt angles were obtained for mono‐, bi‐, and tridentate adsorptions. Hence, the coordination mode cannot be characterized by the molecule tilting.     

Theoretical Simulation of Vibrational Sum‐Frequency Generation Spectra from Density Functional Theory: Application to p‐Nitrothiophenol and 2,4‐Dinitroaniline

The molecular orientation of adsorbed molecules forming self‐assembled monolayers can be determined by combining vibrational sum‐frequency generation (SFG) measurements with quantum chemical calculations. Herein, we present a theoretical methodology used to simulate the SFG spectra for different combinations of polarizations. These simulations are based on calculations of the IR vectors and Raman tensors, which are obtained from density functional theory computations. The dependency of the SFG vibrational signature with respect to the molecular orientation is presented for the molecules p‐nitrothiophenol and 2,4‐dinitroaniline. It is found that a suitable choice of basis set as well as of exchange‐correlation (XC) functional is mandatory to correctly simulate the SFG intensities and consequently provide an accurate estimation of the adsorbed molecule orientation. Comparison with experimental data shows that calculations performed at the B3LYP/6‐311++G(d,p) level of approximation provide good agreement with experimental frequencies, and with IR and Raman intensities. In particular, it is demonstrated that polarization and diffuse functions are compulsory for reproducing the IR and Raman spectra, and consequently vibrational SFG spectra, of systems such as p‐nitrothiophenol. Moreover, the investigated XC functionals reveal their influence on the relative intensities, which show rather systematic variations with the amount of Hartree–Fock exchange. Finally, further aspects of the modeling are revealed by considering the frequency dependence of the Raman tensors.     

Reversible Unfolding–Refolding of Rubredoxin: A Single‐Molecule Force Spectroscopy Study

In metalloproteins, metal centers serve as active sites for a range of functional purposes and as important structural elements to facilitate protein folding and assembly. It is challenging to observe the reversible unfolding and refolding of metalloproteins because of a loss or decomposition of the metal center. Here, the reversible unfolding–refolding of the iron–sulfur protein rubredoxin was observed directly using single‐molecule force spectroscopy. The results demonstrate that the iron can remain attached to the CXXC motif when rubredoxin is unfolded. Upon relaxation, the unfolded rubredoxin can refold into its native holo state with the reconstituted FeS₄ center. The possible loss of iron from the unfolded protein prevents rubredoxin from refolding into its native holo state. These results demonstrated that unfolding of rubredoxin is reversible, as long as the iron remains attached, and provide experimental evidence for the iron‐priming mechanism for the folding of rubredoxin.