双标记~(13)C,~(15)N_3-呋喃妥因的制备

以双标记13 C,15 N3-氨基脲为原料,先与苯甲醛缩合,继而与氯乙酸乙酯取代、环化,再经盐酸水解反应后与5-硝基糠醛二乙酯反应,最终制得双标记13 C,15 N3-呋喃妥因.产物经红外光谱、高效液相色谱及质谱表征.结果表明,所选用的合成路线反应条件温和,产物总收率高于60%,且同位素丰度不下降;目标产物的化学纯度>99.0%,13 C同位素丰度>98%,15 N同位素丰度>99%.     

Nitrogen-15 n.m.r. studies of 13C, 15N labeled arginine

¹⁵N n.m.r. spectra of [¹³C-2, 3-¹⁵N₂-guanidino]arginine and [¹³C, ¹⁵N₂] urea were obtained in D₂O and H₂O at a variety of pH values both with and without proton decoupling. The effects of the proton exchange rate are readily observable in the proton coupled ¹⁵N spectra. When the guanidino group is deprotonated (pK = 12.5), the terminal nitrogens give a single resonance 6.6 ppm downfield of the protonated species, indicating a rapid tautomeric exchange. The observed NH and CN couplings are compared with calculated values, and good agreement is found for ¹J(CN) using a Blizzard–Santry type calculation. The ramifications of the proton exchange on ¹⁵N n.m.r. spectra of amino acids and peptides are discussed.     

13C,15N]2-Acetamido-2-deoxy-D-aldohexoses and their methyl glycosides: synthesis and NMR investigations of J-couplings involving 1H, 13C, and 15N

[reaction: see text] A series of 2-amino-2-deoxy-D-[1-13C]aldohexoses and their methyl glycosides was prepared with use of a simplified cyanohydrin reduction route. Four d-aldopentosylamines (arabino, lyxo, ribo, xylo) were prepared from the corresponding D-aldopentoses by reaction with NH3(g) in MeOH solvent, isolated in solid form, and characterized by 13C and 1H NMR. Hydrolysis of beta-D-xylopyranosylamine was studied using 13C-labeled substrates to establish optimal solution conditions for cyanohydrin formation. Major hydrolytic intermediates were observed and identified by time-lapse 1D and 2D NMR analyses of reaction mixtures. The aldopentosylamines were subsequently employed in cyanohydrin reduction reactions with K13CN to yield C2-epimeric [1-13C]2-aminosugars, which were separated by chromatography on ion-exchange columns. N-Acetylation and methyl glycosidation followed by chromatography gave pure 2-acetamido-2-deoxy-D-[1-13C]aldohexopyranosides. J(CH) and J(CC) spin-spin coupling constants involving the labeled anomeric carbon were measured and compared to those observed previously in methyl D-[1-13C]aldohexopyranosides. In parallel studies, theoretical J-couplings were calculated in model N-acetylated aldopyranosides using density functional theory (DFT) to predict the effect of OH vs NHCOCH(3) substitution at C2 on J(CH) and J(CC) values in aldopyranosyl rings. The synthetic method was also modified to accommodate (15)N- and (13)C-labeling within the N-acetyl side-chain, and some J-couplings involving 1H, 13C, and 15N atoms in 2-[1,2-13C2;15N]acetamido-2-deoxy-D-[1-13C]glucose were measured and interpreted.     

1H, 13C and 15N NMR spectra of [1,2-15N2]pyrazole derivatives

The chemical shifts and coupling constants of [1,2-¹⁵N₂]pyrazole, 2-(1-[1,2- ¹⁵N₂]pyrazolyl)-2-[l,3-²H₆]propanol, 1-nitro[1,2¹⁵N₂] and 3-nitro[1,2-¹⁵N₂]pyrazole are reported.     

13C/15N distance determination by CPMAS NMR in uniformly 13C labeled molecules

The REDOR and CPMAS techniques are applied for measuring 13C-15N dipolar coupling constants in glycine. It is shown that the selective CP or SPECIFIC CP technique removes the coherent evolution of the spin system under homonuclear 13C-13C J couplings. While the large coupling constant (approximately 900 Hz) is readily determined because of the presence of large oscillations in the CPMAS dynamics, their absence precludes the measurement of the small coupling constant (approximately 200 Hz). The experimental results and numerical simulations demonstrate that the determination of 13C-15N coupling constants of medium size (<1 kHz) by the CPMAS technique is mainly limited by the strength of the 1H decoupling field and the size of the 13C and 15N chemical shift anisotropies.     

1H, 13C and 15N NMR spectra of ciprofloxacin

1H NMR assignment, including the values of delta(H) and J(H,H) for the cyclopropane moiety, and 13C NMR and 15N NMR spectral data for ciprofloxacin are presented.     

1H, 13C and 15N NMR assignments of phenazopyridine derivatives

Phenazopyridine hydrochloride (1), a drug in clinical use for many decades, and some derivatives were studied by one- and two-dimensional (1)H, (13)C and (15)N NMR methodology. The assignments, combined with DFT calculations, reveal that the preferred protonation site of the drug is the pyridine ring nitrogen atom. The chemoselective acetylation of phenazopyridine (2) and its influence on the polarization of the azo nitrogen atoms were evidenced by the (15)N NMR spectra. Molecular calculations of the phenazopyridines 2-4 show that the pyridine and phenyl groups are oriented in an antiperiplanar conformation with intramolecular hydrogen bonding between the N-b atom and the C-2 amino group preserving the E-azo stereochemistry.     

Structure and dynamics of silk fibroin studied with 13C, 15N and 2H solid state NMR

[1-¹³C]Gly, L-[1-¹³C]Ala, [¹⁵N]Gly, L-[¹⁵N]Ala, [2,2-²H₂]Gly, L-[3,3-²H₂]Ser and [3,3,3-²H₃]Ala labeled silk fibroin fibers from Bombyx mori and Samia cynthia ricini silkworms were prepared in order to analyze structure of backbone and dynamics of side chain. The torsion angles ϕ and Ψ were determined from the angular dependent ¹³C and ¹⁵N solid state NMR spectra for uniaxially oriented fiber samples. In addition, the characteristic side chain dynamics of Ser residue determined from solid state ²H NMR measurements was compared with those of Ala and Gly residues.     

Synthesis,1H,13C,14N,and15N NMR spectra,and cathodic behavior of N-chloro-1,2,4-triazoles

Syntheses are reported for N-chloro-1,2,4-triazoles and the NMR spectra of these compounds were studied. An investigation was also carried out on a platinum electrode in 0.1 N Bu₄ClO₄ in acetonitrile. The reduction proceeds with the transfer of two electrons and the formation of triazole and chloride ions. The half-wave potentials of the reduction of N-chlorotriazoles correlates well with the pK_a values of the corresponding NH-acids. The electrochemical reduction of N-chlorotriazoles is accompanied by the reaction of N-chlorotriazole with the chloride ion formed on the cathode, which leads to the NH form of 1,2,4-triazole through a series of chemical steps.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 12, pp. 2814–2821, December, 1990.     

1H, 13C and 15N NMR spectroscopy and tautomerism of nitrobenzotriazoles

Benzotriazole nitro derivatives were prepared by nitration of the corresponding benzotriazoles and by methylation or cyclization of appropriate nitro‐1,2‐phenylenediamines. Structures and tautomerism of the nitrobenzotriazoles were studied by multinuclear ¹H, ¹³C, ¹⁵N, and 2D NMR spectroscopy and quantum chemistry. Copyright © 2008 John Wiley & Sons, Ltd.     

1H, 13C,and 15N NMR spectra of some pyridazine derivatives

¹H, ¹³C, and ¹⁵N NMR chemical shifts for pyridazines 4–22 were measured using 1D and 2D NMR spectroscopic methods including ¹H? ¹H gDQCOSY, ¹H? ¹³C gHMQC, ¹H? ¹³C gHMBC, and ¹H? ¹⁵N CIGAR–HMBC experiments. Copyright © 2010 John Wiley & Sons, Ltd.     

Facile backbone (1H, 15N, 13Ca,and 13C′) assignment of 13C/15N‐labeled proteins using orthogonal projection planes of HNN and HN(C)N experiments and its automation

Recently, we introduced an efficient high‐throughput protocol for backbone assignment of small folded proteins based on two‐dimensional (2D) projections of HN(C)N suite of experiments and its automation [Borkar et al., J. Biomol. NMR 2011, 50(3), 285–297]. This strategy provides complete sequence‐specific assignment of backbone (¹H, ¹⁵N, ¹³C^α, and ¹³C′) resonances in less than a day; thus, it has great implications for high‐throughput structural proteomics. However, in cases when such small folded protein exhibits substantial amide ¹H shift degeneracy (typically seen in alpha‐helical proteins), the strategy may fail or lead to ambiguities. Another limitation is with respect to the identification of checkpoints from the variants of 2D‐hncNH spectrum. For example, a protein with many GG, GA, AA, SS, TS, TT, and TS types of dipeptide stretches along its sequence, thus the identification of NH cross‐peak corresponding to second G, A, S, or T becomes difficult. In this backdrop, we present here two improvements to enhance the utility of the proposed high‐throughput AUTOmatic Backbone Assignment protocol: (i) use of 2D‐hNnH spectrum and its variants that display additional ¹H–¹⁵N correlations and thus help to resolve ambiguities arising because of amide ¹H shift degeneracy and (ii) optimization of the τ_CN delay in the 2D‐hncNH experiment that, when properly adjusted, is observed to help remove ambiguities in the identification of the checkpoints. These improvements have also been incorporated in the automation program AUTOmatic Backbone Assignment. Finally, the performance of the strategy and the automation has been demonstrated using the chicken SH3 domain protein. Copyright © 2012 John Wiley & Sons, Ltd.     

Synthesis of 6-15N and 1-15N labeled adenosine monophosphates

A chemical synthesis of 6-¹⁵N and 1-¹⁵N AMPs from 5'-O-acety1-2',3'-O-isopropylideneinosine is reported.     

1H, 13C and 15N NMR spectral assignments for new triazapentalene derivatives

Mesomeric heteropentalene betaines are conjugated fused polyheterocyclic structures that represent interesting intermediates for organic synthesis. Five such structures, containing at least four nitrogen atoms and various substituents, have been characterized by ¹H, ¹³C and ¹⁵N NMR. We report, apparently for the first time, nitrogen NMR data and coupling information on such systems. Inter‐ring long‐range correlations across five bonds with ¹⁵N (⁵J_HN) and up to seven bonds with ¹³C (⁶J_HC and ⁷J_HC) were observed in HSQC experiments. The incorporation of an electron‐withdrawing substituent such as NO₂ was observed to cause an increase in the magnitude of the remote couplings and deshielding of nearby protons, carbons and on all nitrogen atoms of the structure, including remote ones situated on other cycles. Copyright © 2009 John Wiley & Sons, Ltd.     

Synthesis of 13C and 15N labelled (S)-Tryptophan

(R,S)-serine-1-¹³C was incubated in a culture of $\text{Escherichia}$$\text{coli}$ cells to produce (S)-trytophan-1-¹³C. Bromoacetyl bromide-2-¹³C was converted to bromoacetanilide and cyclization of the anilide, followed by reduction and dehydrogenation furnished indole-3-¹³C. Indole-¹⁵N was synthesized by known sequences. These ¹³C and ¹⁵N isotomers of indole were converted by commercially available, lyophilized $\text{E}$. $\text{coli}$ to furnish (S)-tryptophan-γ-¹³C and (S)-tryptophan-indole-¹⁵N, respectively.