Matrix-shimmed ion cyclotron resonance ion trap simultaneously optimized for excitation, detection, quadrupolar axialization, and trapping

A different symmetry is required to optimize each of the three most common Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) electric potentials in a Penning (ICR) ion trap: one-dimensional dipolar ac for excitation (or detection), two-dimensional azimuthal quadrupolar ac excitation for ion axialization, and three-dimensional axial quadrupolar dc potential for ion axial confinement (trapping). Since no single trap shape simultaneously optimizes all three potentials, many trap configurations have been proposed to optimize the tradeoffs between the three requirements for a particular experiment. A more general approach is to divide each electrode into small segments and then apply the appropriate potential to each segment. Here, we extend segmentation to its logical extreme, by constructing a “matrix-shimmed” trap consisting of a cubic trap, with each side divided into a 5 × 5 grid of electrodes for a total of 150 electrodes. Theoretically, only 48 independent voltages need be applied to these 150 electrodes to generate all three desired electric potential fields simultaneously. In practice, it is more convenient to employ 63 independent voltages due to construction constraints. Resistive networks generate the potentials required for optimal quadrupolar trapping and quadrupolar excitation. To avoid resistive loss of excitation amplitude and detected signal, dipolar excitation/detection voltages are generated with a capacitive network. Theoretical Simion 6. 0 simulations confirm the achievement of near-ideal potentials of all three types simultaneously. From a proof-of-principle working model, several experimental benefits are demonstrated, and proposed future improvements are discussed.     

A novel high-performance fourier transform ion cyclotron resonance cell for improved biopolymer characterization

A new trapped ion cell design for use with Fourier transform ion cyclotron resonance mass spectrometry is described. The design employs 15 cylindrical ring electrodes to generate trapping potential wells and 32 separately assignable rod electrodes for excitation and detection. The rod electrodes are positioned internal to the ring electrodes and provide excitation fields that are thereby linearized along the magnetic field over the entire trapped ion volume. The new design also affords flexibility in the shaping of the trapping field using the 15 ring electrodes. Many different trapping well shapes can be generated by applying different voltages to the individual ring electrodes, ranging from quadratic to linearly ramped along the magnetic field axis, to a shape that is nearly flat over the entire trap volume, but rises very steeply near the ends of the trap. This feature should be useful for trapping larger ion populations and extension of the useful range of ion manipulation and dissociation experiments since the number of stages of ion manipulation or dissociation is limited in practice by the initial trapped ion population size. Predicted trapping well shapes for two different ring electrode configurations are presented, and these and several other possible configurations are discussed, as are the predicted excitation fields based on the use of rod electrodes internal to the trapping ring electrodes. Initial results are presented from an implementation of the design using a 3.5 T superconducting magnet. It was found that ions can be successfully trapped and detected with this cell design and that selected ion accumulation can be performed with the utilization of four rods for quadrupolar excitation. The initial results presented here illustrate the feasibility of this cell design and demonstrate differences in observed performance based upon different trapping well shapes.     

Experimental evaluation of a hyperbolic ion trap for fourier transform ion cyclotron resonance mass spectrometry

The Penning ion trap, consisting of hyperbolically curved electrodes arranged as an unbroken ring electrode capped by two end electrodes whose interelectrode axis lies along the direction of an applied static magnetic field, has long been used for single-ion trapping. More recently, it has been used in “parametric” mode for ion cyclotron resonance (lCR) detection of off-axis ions. In this article, we describe and test a Penning trap whose ring electrode has been cut into four equal quadrants for conventional dipolar ICR excitation (on one pair of opposed ring quadrants) and dipolar ICR detection (on the other pair). In direct comparisons to a cubic trap, the present hyperbolic trap offers somewhat improved ICR mass spectral peak shape, higher mass resolving power, and comparable frequency shift as a function of trapping voltage. Mass measurement accuracy over a wide mass range is improved twofold and mass discrimination is somewhat worse than for a cubic trap. The relative advantages of parametric, dipolar, and quadrupole modes are briefly discussed in comparison to screened and unscreened cubic traps.     

Development and Investigation of a Mesh-Electrode Linear Ion Trap (ME-LIT) Mass Analyzer

A mesh-electrode linear ion trap (ME-LIT) mass analyzer was developed and its performance was primarily characterized. In conventional linear ion trap mass analyzers, the trapped ions are mass-selected and then ejected in a radial direction by a slot on a trap electrode. The presence of slots can strongly affect the electric field distribution in the ion trapping region and distort the mass analysis performance. To compensate for detrimental electric field effects, the slot is usually designed and fabricated to be as small as possible, and also has very high mechanical accuracy and symmetry. A ME-LIT with several mesh electrodes was built to compensate for the effects caused by slots. Each mesh electrode was fabricated from a plate electrode with a relatively large slot and the slot was covered with a conductive mesh. Our preliminary experimental results show that the ME-LIT could considerably diminish the detrimental electric field effects caused by slots, and increase the mass resolving power and ion detection efficiency. Even with 4-mm-wide slots, a mass resolution in excess of 600 was obtained using the ME-LIT. Mass resolution could be remarkably improved using mesh electrodes in ion traps with asymmetric electrodes. The stability diagram of the ME-LIT was mapped, and highly efficient tandem mass spectrometry was demonstrated. The ME-LIT was qualified as a LIT mass analyzer. The ME-LIT can improve the mass resolution and decrease the requirements of mechanical accuracy and symmetry of slots, so it shows potential for a wide range of practical uses.

High performance fourier transform ion cyclotron resonance mass spectrometry via a single trap electrode

An open-ended cylindrical cell with a single annular trap electrode located at the center of the excitation and detection region is demonstrated for Fourier transform ion cyclotron resonance mass spectrometry. A trapping well is created by applying a static potential to the trap electrode of polarity opposite the charge of the ion to be trapped, after which conventional dipolar excitation and detection are performed. The annular trap electrode is axially narrow to allow the creation of a potential well without excessively shielding excitation and detection. Trapping is limited to the region of homogeneous excitation at the cell centerline without the use of capacitive coupling. Perfluorotributylamine excitation profiles demonstrate negligible axial ejection throughout the entire excitation voltage range even at an effective centerline potential of only ?0.009 V. High mass resolving power in the single-trap electrode cell is demonstrated by achievement of mass resolving power of 1.45 × 10⁶ for benzene during an experiment in which ions created in a high pressure source cubic cell are transferred to the low pressure analyzer single-trap electrode cell for detection. Such high performance is attributed to the negligible radius dependent radial electric field for ions cooled to the center of the potential well and accelerated to less than 60% of the cell radius. An important distinction of the single-trap electrode geometry from all previous open and closed cell arrangements is exhibition of combined gated and accumulated trapping. Because there is no potential barrier, all ions penetrate into the trapping region regardless of their translational energy as in gated trapping, but additional ions may accumulate over time, as in accumulated trapping. Ions of low translational kinetic energy are demonstrated to be preferentially trapped in the single-trap electrode cell. In a further demonstration of the minimal radial electric field of the single-trap electrode cell, positive voltages can be applied to the annular trap electrode as well as the source cell trap electrode to achieve highly efficient transfer of ions between cells.     

Structure and Performance of Polygonal Electrode Linear Ion Trap

The polygonal electrode linear ion trap (PeLIT) can produce quadrupolar electric field plus some higher order field, which balances the relationship between mass resolution and electrode manufacturing difficulties. The electrodes of PeLIT are relatively simple, but have a good mass resolving power. This study investigated the relationship between the electric field distribution and the ion trap structures, and the performances of PeLIT through theoretical simulation and experimental study. Research results of simulation showed that the polygonal electrode linear ion traps with different structures had different electric field distributions and mass analysis performances. The negative decapole field distorted the performances significantly. The experimental results showed that the mass resolution of reserpine ions (m/z 609) was more than 2500 using a polygonal electrode ion trap. At the same time, mass selective excitation and tandem mass spectrometry experiments were also carried.     

Ion trajectory simulation for electrode configurations with arbitrary geometries

A multi-particle ion trajectory simulation program ITSIM 6.0 is described, which is capable of ion trajectory simulations for electrode configurations with arbitrary geometries. The electrode structures are input from a 3D drawing program AutoCAD and the electric field is calculated using a 3D field solver COMSOL. The program CreatePot acts as interface between the field solver and ITSIM 6.0. It converts the calculated electric field into a field array file readable by ITSIM 6.0 and ion trajectories are calculated by solving Newton's equation using Runge-Kutta integration methods. The accuracy of the field calculation is discussed for the ideal quadrupole ion trap in terms of applied mesh density. Electric fields of several different types of devices with 3D geometry are simulated, including ion transport through an ion optical system as a function of pressure. Ion spatial distributions, including the storage of positively charged ions only and simultaneous storage of positively/negatively charged ions in commercial linear ion traps with various geometries, are investigated using different trapping modes. Inelastic collisions and collision induced dissociation modeled using RRKM theory are studied, with emphasis on the fragmentation of n-butylbenzene inside an ideal quadrupole ion trap. The mass spectrum of 1,3-dichlorobenzene is simulated for the rectilinear ion trap device and good agreement is observed between the simulated and the experimental mass spectra. Collisional cooling using helium at different pressures is found to affect mass resolution in the rectilinear ion trap.     

Characteristics of electrical field and ion motion in surface‐electrode ion traps

In this article, we calculated the potential function of the surface‐electrode ion trap (SEIT) by using Green's function method, optimized trap size, obtained the coefficients of the multipoles and analyzed ion trajectories in the RF potential. The optimized SEIT not only increases its trapping well depth by a factor of about 15, but also has relatively good linearity of the field (or large quadrupole component). The current design of SEIT can work well either as the ion guide for ion transmission or as the ion trap for ion confinement. Our research can be used to calculate the potential function in the SEIT with different device parameters, understand ion motions in the traps and optimize instrument performance. The method for calculating potential function can be expanded to planar and halo ion traps. Copyright © 2012 John Wiley & Sons, Ltd.     

Electrode surface ratio optimization for thermal performance in 3-D dielectrophoretic single-cell traps

We present a systematic numerical analysis of the thermal properties of dielectrophoretic single-cell traps. The influence of the thermal conductivity of the wall material is investigated, as well as the influence of the electrical conductivity of the liquid and the applied potential. We also explore the effect of the electrode geometry on the thermal properties of the trap. We show that substrates with thermal conductivities smaller than 100 W/mK can affect significantly the temperature increase inside the traps. Our results also show, for the first time, that for flat electrodes there is an optimum electrode to trap surface area ratio for which the ratio of temperature increase in the liquid to dielectrophoretic force on a particle can be minimized. This result will be useful in the future development of optimized dielectrophoretic traps.     

稳定图的测定与矩形离子阱质谱性能分析

从理论上讲, 离子阱质谱仪的性能是由阱内电场分布决定的,而电场分布又是由组成离子阱的电极几何结构和离子阱工作电压决定的. 对于矩形离子阱, 即使不考虑其几何结构的偏差, 其阱内的电场分布一般也很复杂. 在矩形离子阱内, 除四极电场外, 还包含多种成分的其他各种高阶场, 它们直接影响离子在阱内的运动轨迹和离子阱质谱的性能. 由于各种电场成分对离子阱内离子运动的影响非常复杂, 还很难从数学上给出精确的解析解, 使得目前从理论上还无法预测高阶场成分对质谱性能的影响. 本工作通过测定不同几何结构的矩形离子阱的稳定图, 从实验上比较了不同场半径, 即不同电场分布条件下的离子阱质谱性能的差别. 实验中, 通过改变离子阱的几何比例结构, 详细测定了不同结构的矩形离子阱的稳定图特征, 并与实验测得的质谱分析结果进行比较. 同时, 我们还详细介绍了矩形离子阱质谱的稳定图的测定方法, 并根据得到的不同情况下的稳定图结构分析了离子阱的质谱性能. 研究结果表明： 可以通过比较试验得到的稳定图结构来判断其离子阱质谱仪的性能如质量分辨能力等. 此外, 实验结果还发现： 对于y方向拉伸结构的矩形离子阱, 其实验绘制得到的是不完整的稳定图. 但根据稳定图边界的特点, 通过采用四极直流电压调制的方法, 可以对y方向拉伸结构的矩形离子阱的性能进行改善, 极大地提高了阱的质量分辨能力.     

Multiple Mass Analysis Using an Ion Trap Array (ITA) Mass Analyzer

A novel ion trap array (ITA) mass analyzer with six ion trapping and analyzing channels was investigated. It is capable of analyzing multiple samples simultaneously. The ITA was built with several planar electrodes made of stainless steel and 12 identical parallel zirconia ceramic substrates plated with conductive metal layers. Each two of the opposing ceramic electrode plates formed a boundary of an ion trap channel and six identical ion trapping and analyzing channels were placed in parallel without physical electrode between any two adjacent channels. The electric field distribution inside each channel was studied with simulation. The new design took the advantage of high precision machining attributable to the rigidity of ceramic, and the convenience of surface patterning technique. The ITA system was tested by using a two-channel electrospray ionization source, a multichannel simultaneous quadruple ion guide, and two detectors. The simultaneous analysis of two different samples with two adjacent ITA channels was achieved and independent mass spectra were obtained. For each channel, the mass resolution was tested. Additional ion trap functions such as mass-selected ion isolation and collision-induced dissociation (CID) were also tested. The results show that one ITA is well suited for multiple simultaneous mass analyses.      

Performance of a Halo Ion Trap Mass Analyzer with Exit Slits for Axial Ejection

The halo ion trap (IT) was modified to allow for axial ion ejection through slits machined in the ceramic electrode plates rather than ejecting ions radially to a center hole in the plates. This was done to preserve a more uniform electric field for ion analysis. An in-depth evaluation of the higher-order electric field components in the trap was also performed to improve resolution. The linear, cubic and quintic (5th order) electric field components for each electrode ring inside the IT were calculated using SIMION (SIMION version 8, Scientific Instrument Services, Ringoes, NJ, USA) simulations. The preferred electric fields with higher-order components were implemented experimentally by first calculating the potential on each electrode ring of the halo IT and then soldering appropriate capacitors between rings without changing the original trapping plate design. The performance of the halo IT was evaluated for 1% to 7% cubic electric field (A ₄/A ₂) component. A best resolution of 280 (m/Δm) for the 51-Da fragment ion of benzene was observed with 5% cubic electric field component. Confirming results were obtained using toluene, dichloromethane, and heptane as test analytes.     

新型三角形电极圆环离子阱的理论模拟研究

圆环离子阱由于其离子储存能力明显优于相同体积下的三维离子阱,近年来被认为是离子阱小型化发展的另一个重要方向。为进一步优化圆环形离子阱的质谱性能,特别是质量分辨能力,本研究提出了一种由三角形电极构建的新型圆环离子阱,它由两个完全等同的、截面为三角形的圆环电极及两个大小不等的圆筒型电极所组成,离子通过共振激发方式弹出。通过理论模拟和对电极结构的优化,获得了具有非对称性的三角形电极结构,通过改善圆环结构,优化电场分布,提高了离子引出效率和离子阱的质量分辨能力,其中一种最优化结构的圆环离子阱对m/z 609离子的质量分辨率达到1486。     

Computer simulation of the gap-tripole ion trap with linear injection, 3D ion accumulation,and versatile packet ejection

The behavior of a completely new ion trap is shown with SIMION 7.0 simulations. The simulated trap, which was a mix of a linear and a 3D trap, was made by axially setting two ion guides with a gap between them. Each guide consisted of three rods with three symmetrically delayed radio frequency (rf) voltages (tripole). The "injected" ions were linearly contained by pulsed potentials on the entrance and exit plates. Then the three-dimensional (3D) rf field in the gap, which was created by the tripole special rod arrangement, could trap the ions when the translational energy was dampened by collisions with low-pressure nitrogen. Because the injected ions were trapped in the small gap, the trapping cycle could be repeated many times before ion ejection, so a high concentrated ion cloud could be obtained. This trapping and accumulation methodology is not possible in most conventional multipole linear traps with even number of poles. Compared with quadrupole linear trap at the same rf amplitude, tripole lost more ions due to strong charge repulsion in the ion cloud. However, tripole could catch up the ions at higher voltage. Radial and axial mass-independent ejection of the ions localized in the tripole gap was very simple, compared with conventional linear ion traps that need extra and complicated electrodes for effective axial ejection.     

A novel electric ion resonance cell design with high signal-to-noise ratio and low distortion for Fourier transform mass spectrometry

Performing wideband ion image current detection mass spectrometry experiments with an electric ion trap—e. g., the Paul trap—is a difficult task, as there is a strong crosstalk current induced by the high voltages of the radio frequency (rf) storage field. In a classic Paul trap the metallic hyperbolic electrodes (a ring electrode and two end cap electrodes) are shaped following the isopotential lines of the quadrupole potential distribution. In our new design the ring electrode is replaced by a cylindrical series of ring electrodes with a parabolic potential distribution, whereas the end cap electrodes are used without modification. Thus the quadrupole field within the trap remains unchanged but the capacitances between the electrodes and therefore the crosstalk currents are significantly reduced. The remaining crosstalk is balanced out by an electronic compensation technique. As a consequence the weak signals of the ion-induced charge can be detected with a wideband low-noise amplifier to perform Fourier transform mass spectrometry experiments with improved signal-to-noise ratio.     

阶梯电极离子阱质量分析器的结构与性能

本研究从理论上优化了一种新型结构的线型离子阱质量分析器-阶梯电极离子阱质量分析器,它是由2对阶梯电极与1对端盖电极组成。与传统平板电极矩形离子阱长阶梯电极离子阱相比,具有调节电场分布的优点,同时在几何结构设计上更接近于双曲面电极结构,但比双曲面电极更容易加工。通过改变阶梯电极结构的高度、宽度、场半径比例等几何参数,实现了对离子阱内部电场分布的优化,从而实现离子阱性能的优化。理论模拟研究结果表明,根据几何结构和电场分布优化获得的阶梯电极离子阱质量分析器(X0×Y0=9 mm×5 mm),可以在225 Da/ s 扫速下获得10150的质量分辨率。阶梯电极离子阱结构简单,分辨能力明显高于矩形离子阱。初步的实验结果表明,阶梯电极离子阱具有较好的串级质谱分析性能。     

Some properties of ion trajectories in the radial plane of an axially symmetric ion trap

In this article we analyse the trajectories of externally generated ions injected in the radial plane into the ion trap. The shape of the envelope curves for two-dimensional (2D) ion trajectories is determined. Conditions under which these envelope curves can be transformed into circles are found. We show that the amplitude of ion oscillations is a minimum in this case and that this mode corresponds to optimised ion trapping conditions. Also we discuss a ring-shaped ion trap mass spectrometer electrode system which consists of two ring electrodes, and which utilises ion trajectories with circular envelope curves.     

Manipulating particles in microfluidics by floating electrodes

Various particle manipulations including enrichment, movement, trapping, separation, and focusing by floating electrodes attached to the bottom wall of a straight microchannel under an imposed DC electric field have been experimentally demonstrated. In contrast to a dielectric microchannel possessing a nearly uniform surface charge (or ζ potential), the metal strip (floating electrode) is polarized under the imposed electric field, resulting in a nonuniform distribution of the induced surface charge with a zero net surface charge along the floating electrode's surface, and accordingly induced-charge electroosmotic flow near the metal strip. The induced induced-charge electroosmotic flow can be regulated by controlling the strength of the imposed electric field and affects both the hydrodynamic field and the particle's motion. By using a single floating electrode, charged particles could be locally concentrated in a section of the channel or in an end-reservoir and move toward either the anode or the cathode by controlling the strength of the imposed electric field. By using double floating electrodes, negatively charged particles could be concentrated between the floating electrodes, subsequently squeezed to a stream flowing in the center region of the microchannel toward the cathodic reservoir, which can be used to focus particles.     

Electrodeless direct current dielectrophoresis using reconfigurable field-shaping oil barriers

We demonstrate dielectrophoretic (DEP) potential wells using pairs of insulating oil menisci to shape the DC electric field. These oil menisci are arranged in a configuration similar to the quadrupolar electrodes, typically used in DEP, and are shown to produce similar field gradients. While the one-pair well produces a focusing effect on particles in flow, the two-pair well results in creating spatial traps against crossflows. Uncharged polystyrene particles were used to map the DEP force fields and the experimental observations were compared against the field profiles obtained by numerically solving Maxwell's equations. We demonstrate trapping of a single particle due to negative DEP against a pressure-driven crossflow. This can be easily extended to trap and hold cells and other objects against flow for a longer time. We also show the results of particle trapping experiments performed to observe the effect of adjusting the oil menisci and the gap between two pairs of menisci in a four-menisci configuration on the nature of the DEP well formed at the center. A design parameter, Theta, capturing the dimensions of the DEP energy well, is defined and simulations exploring the effects of different geometric features on Theta are presented.     

Simulation of Duty Cycle-Based Trapping and Ejection of Massive Ions Using Linear Digital Quadrupoles: the Enabling Technology for High Resolution Time-of-Flight Mass Spectrometry in the Ultra High Mass Range

Duty cycle-based trapping and extraction processes have been investigated for linear digitally-driven multipoles by simulating ion trajectories. The duty cycles of the applied waveforms were adjusted so that an effective trapping or ejection electric field was created between the rods and the grounded end cap electrodes. By manipulating the duty cycles of the waveforms, the potentials of the multipole rods can be set equal for part of the waveform cycle. When all rods are negative for this period, the device traps positive ions and when all are positive, it ejects them in focused trajectories. Four Linac II electrodes[1] have been added between the quadrupole rods along the asymptotes to create an electric field along the symmetry axis for collecting the ions near the exit end cap electrode and prompt ejection. This method permits the ions to be collected and then ejected in a concentrated and collimated plug into the acceleration region of a time-of-flight mass spectrometer (TOFMS). Our method has been shown to be independent of mass. Because the resolution of orthogonal acceleration TOFMS depends primarily on the dispersion of the ions injected into the acceleration region and not on the ion mass, this technology will enable high resolution in the ultrahigh mass range (m/z > 20,000).