Binuclear ruthenium complexes containing mPTA and alkyl-bis(8-thiotheophylline) derivatives (mPTA = N-methyl-1,3,5-triaza-7-phosphaadamantane)

The water-soluble complex [RuClCp(PPh₃)(mPTA)](CF₃SO₃) reacts with the thiopurines, bis(S-8-thiotheophylline)methane (MBTTH₂), 1,2-bis(S-8-thiotheophylline)ethane (EBTTH₂), and 1,3-bis(S-8-thiotheophylline)propane (PBTTH₂), to lead to the binuclear ruthenium(II) complexes [{RuCp(PPh₃)(mPTA)}₂-μ-(L-κS7,S′7)](CF₃SO₃)₂ where (L = MBTT^2? (1), EBTT^2? (2), and PBTT^2? (3)). All the complexes have been fully characterized by elemental analysis, IR, and multinuclear ¹H, ¹³C{¹H}, and ³¹P{¹H} NMR spectroscopy. The cyclic voltammetry of the complexes is characterized by two one-electron oxidative responses (Ru^II–Ru^II/Ru^III–Ru^II; Ru^III–Ru^II/Ru^III–Ru^III) that increase their redox potential when the bis(8-thiotheophylline)-alkyl-bridge growths. The reactivity against DNA and partition coefficient of the complexes were also determined.     

Measurement of reaction cross-sections for 64Ni(n, γ) 65Ni at E n = 0.025 eV and 58Ni(n, p) 58Co at E n = 3.7 MeV

The reaction cross-sections for ⁶⁴Ni(n, γ) ⁶⁵Ni at E _n  = 0.025 eV and ⁵⁸Ni (n, p) ⁵⁸Co at E _n  = 3.7 MeV have been experimentally determined using activation and off-line γ-ray spectrometric technique. The thermal neutron flux used is from the thermal Column of the reactor APSARA at BARC, Mumbai, whereas the neutron energy of 3.7 MeV is from the ⁷Li(p, n) reaction at Pelletron facility, TIFR, Mumbai. The ⁶⁴Ni(n, γ) ⁶⁵Ni and ⁵⁸Ni(n, p) ⁵⁸Co reactions cross-sections from present work are compared with the available literature data and found to be in good agreement. The ⁵⁸Ni(n, p) ⁵⁸Co reaction as a function of neutron energy is also calculated theoretically using TALYS computer code version 1.2 and found to be higher than the experimental data.     

Density functional theory study on (F2AlN3) n (n = 1–4) clusters

Possible geometrical structures and relative stabilities of (F₂AlN₃) _n (n = 1–4) clusters were studied using density functional theory at the B3LYP/6-311+G* level. The optimized clusters (F₂AlN₃) _n (n = 2–4) possess cyclic structure containing Al–N_α–Al linkages, and azido in azides has linear structure. The IR spectra of the optimized (F₂AlN₃) _n (n = 1–4) clusters have three vibrational sections, the whole strongest vibrational peaks lie in 2218–2246 cm⁻¹, and the vibrational modes are N₃ asymmetric stretching vibrations. Trends in thermodynamic properties with temperature and oligomerization degree n are discussed, respectively. A study of their thermodynamic properties suggests that monomer 1A forms the most stable clusters (2A, 3A, and 4B) can occur spontaneously in the gas phase at temperatures up to 800 K.     

Modification of the electronic properties of zigzag (n = 5–10) and armchair (n = 3, 5) carbon nanotubes by K atom adsorption

The adsorption of the potassium atom onto the surface of (n,0) zigzag nanotube (n = 5–10) and (n,n) armchair nanotubes (n = 3, 5) has been studied by density functional theory. The local density approximation calculation of adsorption energy (E _ads) emphasized on the dependency of E _ads to the diameter and chirality of the nanotube. E _ads decreases when the diameter increases. So the (5,0)-K system has the highest adsorption energy among all structures. Furthermore, a significant change was observed in the electronic properties of potassium-adsorbed single-walled carbon nanotube (SWCNT) and the metallic behavior of the nanotube improved. Therefore, our results showed that such modified SWCNTs can be applied in nanodevices such as transistors.     

Synthesis,crystal structure,and thermal stability of ionic cluster compounds (phenH)4[Re4Q4(CN)12]·nH2O (Q = S,Se, n = 6; Q = Te,n = 10)

Three new salts of tetrahedral rhenium chalcocyanide cluster anions [Re₄Q₄(CN)₁₂]^4? (Q = S, Se, Te) and 1,10-phenanthroline-1-ium cations, (phenH)₄[Re₄S₄(CN)₁₂]·6H₂O (1), (phenH)₄[Re₄Se₄(CN)₁₂]·6H₂O (2), and (phenH)₄[Re₄Te₄(CN)₁₂]·10H₂O (3), have been synthesized by reactions of K₄[Re₄Q₄(CN)₁₂]·nH₂O with 1,10-phenanthroline in the presence of Nd³⁺ in an acidic aqueous medium (pH 4). 1 and 2 exhibit similar 2-D layered supramolecular architectures based on hydrogen bonds between water molecules, CN-groups of cluster anions, and phenH⁺ cations. The latter are involved in π–π and C–H?π stacking interactions, connecting the adjacent layers with each other. Complex 3 demonstrates a 3-D framework based on hydrogen bonds between water molecules and CN-groups, π–π and C–H?π interactions. Notably short O···Te contacts of 3.40 and 3.50 Å are found in the structure of 3. The thermal properties of 1–3 have been investigated by TG-DTG.     

Measurement of 56Fe(n, p)56Mn reaction cross-section at E n = 5.9, 9.85, 14.8 and 15.5 MeV

The ⁵⁶Fe(n, p)⁵⁶Mn reaction cross-section at neutron energies of 5.9 ± 0.6, 9.85 ± 0.38, 14.8 ± 0.1 and 15.5 ± 0.7 MeV from the ⁷Li(p, n) as well as ³H(d, n) reactions has been experimentally measured using activation and off-line γ-ray spectrometric technique. The experimentally determined ⁵⁶Fe(n, p)⁵⁶Mn reaction cross-sections from the present work were compared with the latest available evaluated nuclear data libraries of ENDF/B-VII.1, JENDL-4.0 and JEFF-3.1/A. The present data along with the literature data in a wide range of neutron energies were interpreted in terms of competition between different reaction channels. The measured cross-sections were also estimated theoretically using TALYS-1.4 and EMPIRE-2.19 computer codes over neutron energies from near threshold to 20 MeV to compare with the experimental data.     

Geometrical structures and possible dissociation channels of MnP n + (n = 2–8) binary cluster ions

An all-electron (AE) calculation on the geometrical structures and possible dissociation channels of MnP _n ⁺ (n = 2–8) cluster ions has been performed by using density functional theory with the generalized gradient approximation (GGA) at PW91 level. The lowest energy structures of MnP _n ⁺ (n = 2–8) cluster ions may be regarded as the outcome of bonding between Mn atom and one or two units of P₂, P₃, and P₄. The most possible dissociation channels of MnP _n ⁺ (n = 2–8) cluster ions are the detachment of P₂, P₃, or P₄ unit. These conclusions are basically consistent well with previous works in which the P₂ and P₄ structures are regarded as two relatively stable units and easy to be stripped.     

The density functional theory study CO oxidation catalyzed by subnanometer AlAg n (n = 1–3) clusters

The efficiency of AlAg _n (n = 1–3) alloy clusters toward CO oxidation is demonstrated from first-principles theory. It is found that these subnanometer species transform into reaction complexes which catalyze CO oxidation through the Langmuir–Hinshelwood path. It is shown that mixing two different metals (Al and Ag) can have beneficial effects on the catalytic activity and the alloyed AlAg₃ cluster is proposed as the best effective nanocatalysts.     

Why edge inversion? Theoretical characterization of the bonding in the transition states for inversion in F n NH(3−n) and FnPH(3−n) (n = 0–3)

As first noted by Dixon et al. (J Am Chem Soc 108:2461–2462, 1986), heavily fluorinated pyramidal phosphorus compounds, e.g., F _n PH_(3?n) with n > 1, invert through a T-shaped transition state (edge inversion) rather than the D_3h-like transition states (vertex inversion) found in the corresponding nitrogen compounds and less fluorinated phosphorus compounds. Subsequent studies by Dixon and coworkers established that this is a general phenomenon and has important chemical consequences. But what is the reason for the change in the structure of the transition state? Recent theoretical investigations have resulted in the discovery of a new type of chemical bond, the recoupled pair bond. In particular, it was found that recoupled pair bond dyads account for the hypervalency of the elements beyond the first row. In this paper, we show that recoupled pair bond dyads also account for the existence of the edge inversion pathway in heavily fluorinated phosphorus compounds and likely account for the presence of the lower energy inversion pathways in pyramidal compounds of other elements beyond the first row.     

Density-Functional Theory Study on Neutral and Charged M n C2 (M = Fe, Co, Ni, Cu; n = 1–5) Clusters

The ground-state geometrical and electronic properties of neutral and charged M _n C₂ (M = Fe, Co, Ni, Cu; n = 1–5) clusters are systematically investigated by density-functional calculations. The growth evolution trends of neutral and charged Fe _n C₂, Co _n C₂, Ni _n C₂ and Cu _n C₂ (n = 1–5) clusters are all from lower to higher dimensionality, while it is special for Cu _n C ₂ ^± (n = 1–5) clusters which favor planer growth model. The space directional distributions of Co and Ni indicate stronger magnetic anisotropy than that in Cu atoms. Compare with experimental data (photoelectron spectroscopy), our results are in good agreement. The interaction strengths between metal and carbon atoms in TM–C (TM = Fe, Co, Ni) clusters are comparable and are obviously larger than that in Cu–C clusters, and this interaction strengths also decrease through the sequence: cation > neutral > anion, which may be crucial in exploring the differences in the growth mechanisms of metal–carbon nano-materials.     

Theoretical studies of the reactions of Cl atoms with CF3CH2OCH n F(3−n) (n = 1, 2, 3)

This paper presents the theoretical studies of the reactions of Cl atoms with CF₃CH₂OCH₃, CF₃CH₂OCH₂F and CF₃CH₂OCHF₂ using an ab initio direct dynamics theory. The geometries and vibrational frequencies of the reactants, complexes, transition states and products are calculated at the MP2/6-31+(d,p) level. The minimum energy path is also calculated at same level. The MC-QCISD method is carried out for further refining the energetic information. The rate constants are evaluated with the canonical variational transition state theory (CVT) and CVT with small curvature tunneling contributions in the temperature range 200–1,500 K. The results are in good agreement with experimental values.     

First principle study of CrF n (n = 1–7) nano clusters: An investigation of superhalogen properties

Quantum chemical calculations using gradient corrected density functional theory at B3LYP level reveals the unusual properties of a chromium (Cr) atom interacting with fluorine (F) atoms. Up to seven F atoms are bound to a single Cr atom, which results in increase of electron affinities as successive fluorine atoms are attached, reaching a peak value of 7.14 eV for CrF₆. The large HOMO–LUMO energy gap, both in neutral and anionic form, further provide evidence of their stability. These unusual properties brought about by involvement of inner shell 3d-electrons, which not only allow CrF _n (n = 1–7) clusters to belong to the class of superhalogens but also show that its valence can exceed the nominal value of 2.     

Structure, stability and electronic property of the gold-doped germanium clusters: AuGe n (n = 2–13)

The structure, stability and electronic property of the AuGe _n (n = 2–13) clusters with different spin configurations are systematically investigated with density-functional theory approach at UB3LYP/LanL2DZ level. In examining the lowest energy structures, it is found that the growth behaviors for the small-sized AuGe _n (n = 2–9) clusters and relatively large-sized AuGe _n (n = 10–13) clusters are different. As the number of Ge atom increases, the Au atom would gradually move from convex to surface and to interior sites. For the most stable structures of AuGe _n (n = 10–13) clusters, the Au atom would be completely surrounded by the Ge atoms to form Au-encapsulated Ge _n cages. Natural population analysis shows that the charges always transfer from the Au atom to the Ge _n framework except for the AuGe₂ cluster. This indicates that the Au atom acts as electron donor even the 5d orbitals of the Au atom are not significantly involved in chemical bonding. The analyses of the average atomic binding energies as well as the dissociation energies and the second-order differences of total energy show that the AuGe _n clusters with n = 5, 9 and 12 are more stable than their neighboring ones, in which the bicapped pentagonal prism AuGe₁₂ in D _2d symmetry is most stable. The highest occupied molecular orbital–lowest unoccupied molecular orbital gaps are explored to be in the region of semiconductors and the more stable clusters have slightly smaller gaps. It could be expected that the stable clusters might be considered as the novel building blocks in practical applications, e.g., the cluster-assembled semiconductors or optoelectronic material.     

Structural,electrical and optical properties of Lin@C20 (n = 1–6) nanoclusters

The current research was undertaken to investigate the structural, electrical, and optical properties of C₂₀ fullerene decorated with different numbers of lithium (Li) atoms on its surface. The stability of the structure increased as the number of lithium atoms increased. Increasing the number of lithium atoms around C₂₀ from one to four slightly increased the E_g (energy gap between the highest occupied molecular orbital and the lowest unoccupied molecular orbital). Increasing the number to five or six narrowed the E_g. The electrical properties such as ionization potential (I), electron affinity (A), chemical potential (μ), global hardness (η), global softness (γ), global electrophilicity (ω), and electronegativity (χ) were also calculated. The polarizability (α) and first hyperpolarizability (β₀), which correspond to the linear optical and nonlinear optical properties, respectively, were also calculated. An intense increase in β₀ was recorded as the effect of five Li atoms adsorbed onto the C₂₀ surface. The results of this study can be used to design and fabricate nanomaterials with adjustable electro-optical properties.     

Group VB transition metal oxide clusters M4O n −/0 (M = Nb, Ta; n = 8–11): structural evolution and chemical bonding

The structural and electronic properties of two series of Group VB transition metal oxide clusters, M₄O _n ^? and M₄O _n (M = Nb, Ta; n = 8–11), are investigated using density functional theory calculations. Generalized Koopmans’ theorem is applied to predict the vertical detachment energies and simulate the photoelectron spectra. Large highest occupied molecular orbital–lowest unoccupied molecular orbital gaps are observed for these two stoichiometric M₄O₁₀ clusters and estimated to be 3.98 and 4.38 eV for M = Nb and Ta, respectively. The M₄O ₁₀ ^?/0 (M = Nb, Ta) clusters are polyhedral cage structures with high symmetry (T _d for the neutral and D _2d for the anion) in which each metal atom joints three bridging and one terminal O atoms. For the Nb oxide species, Nb₄O ₈ ^?/0 and Nb₄O ₉ ^?/0 can be viewed as removing two and one terminal O atoms from Nb₄O ₁₀ ^?/0 , respectively. The Ta species follow the same rule to the Nb species, except that the anionic Ta₄O₈ ^? is formed by removing one terminal and one bridging O atoms from Ta₄O₁₀ ^?. The Ta₄O₉ containing a localized Ta³⁺ site can readily react with O₂ to form the Ta₄O₁₁ which can also be viewed as replacing a terminal oxygen atom in Ta₄O₁₀ by a peroxo O₂ unit, whereas the added oxygen atom is found to be a bridging one in the O-rich clusters Nb₄O ₁₁ ^?/0 and the anionic Ta₄O₁₁ ^?. Molecular orbital analyses are performed to analyze the chemical bonding in the tetra-nuclear metal oxide clusters and to elucidate their structural and electronic evolution.     

A computational investigation of the electronic properties of Octahedral Al n N n and Al n P n cages (n = 12, 16, 28, 36, and 48)

Density functionla theory (DFT) calculations are performed to characterize geometric and electronic features of the octahedral Al _n N _n and Al _n P _n cages (n = 12, 16, 28, 32, and 48). Toward this aim, ¹⁵N, ²⁷Al, and ³¹P chemical shielding (CS) tensors as well as natural charge analyses are calculated for the optimized structures. CS parameters detect three distinct electronic environments for atoms within the Al _n N _n and Al _n P _n cages. The chemical shifts of N2 sites belonging to a hexagon and surrounded by three hexagons and a square obtained are different from those of N3 sites belonging to a hexagon that is surrounded only by hexagons—due to different curvatures exerted at the sites with different local structures. In addition, there is an increasing tendency in the Δσ values of the three local structures, Δσ (N1) > Δσ (N2) > Δσ (N3), N1 sites belonging to four-membered rings. The chemical shieldings of those Al and P sites belonging to a hexagon that is surrounded only by hexagons in the cages (360.7–366.7 and 496.5–514.7 ppm) are close to those previously reported for AlP nanotubes. Three distinct electrostatic environments around the N, Al, and P nuclei are also confirmed by the calculated natural charges. It should be noted that the positively charged Al atoms on the cages turn out to be the available sites for adsorption of H2 molecules.     

Chemical bond between Cu(II) and Rn: ab initio study of CuRn n 2+ (n = 1–6) by coupled cluster method

Quantum chemical calculations of the structures, stabilities, and interactions of the title series at the CCSD(T) theoretical level are performed. The analysis of binding energies, average binding energies, and fragmentation energies indicate that the n = 2 system is more stable than its neighbors. Topological analysis of the natural bond orbital, electron density deformation, integrated charge transfer, bond critical point properties, reduced density gradient analysis are performed to explore the nature of the interaction. The results show that the present Rn–Cu²⁺ interactions fall into intermediate interaction type with a pronounced covalent character.     

Preparation, molecular structure, and thermal analyses of a novel coordination compound [Cd(AZT)4(H2O)2](PA)2 · 4H2O (AZT = 3-azido-1,2,4-triazole, PA = picrate)

Abstract  The crystal structure of 3-azido-1,2,4-triazole (AZT) has been determined. A novel coordination compound [Cd(AZT)₄(H₂O)₂](PA)₂ · 4H₂O has been synthesized by using 3-azido-1,2,4-triazole as ligand, and its structure has been characterized by using X-ray single crystal diffraction, elemental analysis, and FT-IR spectroscopy. Each cadmium (II) center is coordinated with four N atoms of four AZT molecules and two O atoms of two H₂O molecules to form a slightly distorted octahedron. The optimized molecular structure and NBO charges of 3-azido-1,2,4-triazole have been obtained from the density functional theory (DFT) with the B3LYP method employing the 6-311 + G** basis sets. Thermal decomposition mechanism of [Cd(AZT)₄(H₂O)₂](PA)₂ · 4H₂O has been predicted based on DSC, TG-DTG, and FT-IR analyses. The kinetic parameters of the first exothermic process of [Cd(AZT)₄(H₂O)₂](PA)₂ · 4H₂O were studied by applying the Kissinger’s and Ozawa-Doyle’s methods. Index Abstract  A novel coordination compound [Cd(AZT)₄(H₂O)₂](PA)₂ · 4H₂O has been synthesized by using 3-azido-1,2,4-triazole as ligand and its structure has been characterized by using X-ray single crystal diffraction, elemental analysis, and FT-IR spectroscopy. Each cadmium (II) center is coordinated to form a slightly distorted octahedron. Thermal decomposition mechanism of [Cd(AZT)₄(H₂O)₂](PA)₂ · 4H₂O has been predicted based on DSC, TG-DTG, and FT-IR analyses.      

Thermodynamic properties of inclusion complexes of α-cyclodextrin + aliphatic nitriles (H(CH2) n CN: n = 1–8) in aqueous solution

In order to investigate the contribution of the hydrophilic parts of guest molecules of aliphatic complexes to the inclusion reaction, the thermodynamic properties of inclusion complexes of cyclodextrin (α-CD) with aliphatic nitriles [H(CH₂) _n CN: n = 1–8] into the α-CD cavity in dilute aqueous solutions were measured by a micro-calorimeter at 298.15 K. The thermodynamic properties of inclusion for the octane nitrile system were different from those of others. The inclusion process of aliphatic nitriles to α-CD has two kinds of major driving force of enthalpy and entropy driven inclusion. The interaction energies of inclusion complexes of α-CD and aliphatic nitriles were determined by DFT calculation (B3LYP/6-31++G (d,p)) in water and compared with the experimental results. DFT calculations were performed on the inclusion complexes of α-CD with seven nitriles of each conformer. Both the gas phase interaction and solvent effect were taken into consideration. Also non-polar interactions between aliphatic nitriles + α-CD in aqueous solution were calculated and herein the inclusion energy is discussed.