Poly(ethylene glycol) self-assembled monolayer island growth

Here, we report a study of the morphology and growth dynamics of a self-assembled monolayer (SAM) of the amide containing poly(ethylene glycol) (PEG) thiol (CH3O(CH2CH2O)17NHCO(CH2)2SH) on atomically flat Au(111) surfaces. SAM growth from a 20 muM ethanolic solution reveals island growth through three distinct steps: island nucleation, island growth, and coalescence. The coalescence-step, filling voids in the SAM, is by far slowest. The fine structure study reveals dendritic island formation, an observation which can be explained by attractive intermolecular interactions and surface diffusion-limited aggregation. We have also observed a change in the island height, which peaks during the island growth phase. This height change can be associated with a molecular conformational transition.     

Zinc oxide growth morphology on self-assembled monolayer modified silver surfaces

Using organic molecules to direct inorganic crystal growth has opened up new avenues for controlled synthesis on surfaces. Combined with soft lithography to form patterned templates, self-assembled monolayers (SAMs) have been shown to be a powerful approach for the assembly of inorganic nanostructures. In this work, we show that the surface free energy of SAM-modified silver, which depends on end groups and deposition method of SAMs, has a dramatic effect on the nucleation and growth of crystalline ZnO, a technologically important material, from supersaturated solutions. For SAMs with inert methyl end groups, ZnO nucleation is inhibited. For SAMs with chemically active (carboxylic or thiol) end groups, the ZnO morphology is found to be three-dimensional nanorods on low-surface-energy surfaces and two-dimensional thin films on high-energy surfaces.     

Electrochemical study of self-assembled monolayer adsorption

The electrochemical behaviour of self-assembled monolayer (SAM) of aliphatic hexadecanethiol was studied by cyclic voltammetry (CV), elimination voltammetry with linear scan (EVLS) and crystal quartz microbalance (QCM). SAMs were electrochemically created on gold-coated QCM crystal through the sulphur in 1-hexadecanethiol molecule head group. The effect of thiol concentration and potential scan rate on the SAM formation was studied. Formation of SAM was confirmed by CV and QCM. EVLS results revealed the kinetically controlled process followed with electrode reaction in adsorbed state characteristic for SAM formation at lower concentration. The electrode reaction of a totally adsorbed electroactive species was indicated by means of a peak-counter peak signal at higher thiol concentration.     

Electrochemistry of a carotenoid self-assembled monolayer

A carotenoid self-assembled monolayer was prepared by dipping a gold electrode into a solution of 4^′-thioxo-β,β-caroten-4-one in acetonitrile. Electrochemistry of the surface layer was investigated by cyclic voltammetry in an aqueous solution. No electrochemical reaction was detected in the potential region between 0.5 and −0.6 V vs. SCE. The anodic reaction of adsorbed carotenoid occurs at 0.8 V, whereas the irreversible anodic desorption proceeds at 1.4 V in 0.01 M HClO₄. Formation of the surface layer resulted in a decrease of the charging current as well as in a strong inhibition of the electron transfer reaction for species such as Fe(CN)₆³⁻, Ru(NH₃)₆³⁺, and dissolved oxygen. Prolonged voltage cycling in the O₂ reduction range induced some changes in the surface layer characteristics that were tentatively accounted for by the cross-linking of adsorbed molecules under the effect of transient oxygen radicals.     

Kinetics of octadecyltrimethylammonium bromide self-assembled monolayer growth at mica from an aqueous solution

We have studied the growth kinetics of self-assembled monolayers (SAMs) ofoctadecyltrimethylammonium bromide (C18TAB) on mica below the critical micelle concentration at 22, 30, 40, and 50 degrees C. A combination of atomic force microscopy, contact angle goniometry, and transmission infrared spectroscopy was used to follow the growth processes to determine the rates involved in the growth of a C18TAB SAM on mica. The growth of a SAM consisted of four distinct processes: deposition of adsorbate molecules, growth of a disordered 2D liquid phase, nucleation of islands of an ordered 2D solid phase, and subsequent growth of the solid phase. The rates of these various processes are determined, and the activation energies for several processes were calculated including those for the adsorption onto a bare substrate (20 kJ/mol), adsorption into the saturated liquid phase (100 kJ/mol), and nucleation of islands (0.3 kJ/mol). Despite the small activation barrier to island nucleation, the nucleation rate is qualitatively slow, suggesting that entropic effects dominate the nucleation rate.     

Patterned growth of large oriented organic semiconductor single crystals on self-assembled monolayer templates

This work demonstrates a method for inducing site-specific nucleation and subsequent growth of large oriented organic semiconductor single crystals using micropatterned self-assembled monolayers (SAMs). We demonstrate growth of oriented, patterned, and large organic semiconductor single crystals for potential use in organic electronic devices. The control over multiple parameters in a single system has not yet been reported. The ability to control various aspects of crystal growth in one system provides a powerful technique for the bottom-up fabrication of organic single-crystal semiconductor devices.     

Soft-landing of peptides onto self-assembled monolayer surfaces

Mass-selected peptide ions produced by electrospray ionization were deposited as ions by soft-landing (SL) onto fluorinated and hydrogenated self-assembled monolayer (FSAM and HSAM) surfaces using a Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) specially designed for studying collisions of large ions with surfaces. Analysis of modified surfaces was performed in situ by combining 2 keV Cs(+) secondary ion mass spectrometry with FT-ICR detection of the sputtered ions (FT-ICR-SIMS). Similar SIMS spectra obtained following SL at different collision energies indicate that peptide fragmentation occurred in the analysis step (SIMS) rather than during ion deposition. The effect of the surface on SL was studied by comparing the efficiencies of SL on gold, FSAM, HSAM, and COOH-terminated SAM surfaces. It was found that FSAM surfaces are more efficient in retaining ions than their HSAM analogues, consistent with their larger polarizability. The efficiency of soft-landing of different peptides on the FSAM surface increases with the charge state of the ion, also consistent with an ion-polarizable molecule model for the initial stage of soft-landing on SAM surfaces. The gradual decrease of peptide ion deposition efficiency with an increase in collision energy found experimentally was quantitatively rationalized using the hard-cube model.     

Well-ordered self-assembled monolayer surfaces can be used to enhance the growth of protein crystals

A series of hydrophobic self-assembled monolayers (SAMs) was generated by the adsorption of undecanethiol, dodecanethiol, and octadecanethiol onto transparent gold-coated glass microscope slides. Protein crystallization trials using droplets deposited on the surfaces of the optically transparent SAMs were compared to those for which the droplets were deposited on the surfaces of conventional silanized glass microscope slides. For the five distinct proteins examined in the crystallization trials (i.e., lysozyme, alpha-lactalbumin, hemoglobin, thaumatin, and catalase), the SAMs generally afforded, (1) a faster rate of crystallization, (2) a larger crystal size; and (3) a broader range of crystallization conditions than that afforded by silanized glass. The greatest enhancements were observed with the highly ordered SAMs derived from octadecanethiol, which are evaluated here for the first time.     

Enantioselective crystal growth of leucine on a self-assembled monolayer with covalently attached leucine molecules

Enantioselective crystal growth of leucine occurs on a solid surface modified with a self-assembled monolayer depending on the chirality of the enantiomer attached, as evidenced by the X-ray diffraction method.     

Organosilane self-assembled monolayer growth from supercritical carbon dioxide in microstructured optical fiber capillary arrays

Microstructured optical fibers form a new class of extreme aspect ratio templates that are well-suited for precise, designed spatial organization of materials and molecules at dimensions down to the nanoscale. The extreme aspect ratios of the nanoscale to microscale pores in the templates necessitates new approaches to fabrication of nanowires, nanotubes, and self-assembled monolayers within them. High-pressure fluids, which have lower viscosities than liquids and no surface tension, are well-suited for penetrating such extreme aspect ratio capillaries. Here we report an approach to fabricating self-assembled monolayers within microstructured optical fibers using near supercritical or supercritical carbon dioxide. An AFM-based "shaving" technique has been developed to characterize the monolayers formed in capillaries that are too small to allow for characterization by conventional approaches.     

Effect of magnesium ions on oriented growth of calcite on carboxylic acid functionalized self-assembled monolayer

The combined effect of templating and solution additives on calcite crystallization was studied. Self-assembled monolayers of mercaptoundecanoic acid supported on silver, as templates, induced the uniform, oriented nucleation of calcite from the (012) plane. The presence of Mg2+ in the crystallizing solution affected the crystal growth dramatically, due to the selective Mg binding to the calcite planes roughly parallel to the c-axis. Highly homogeneous arrays of oriented crystals with characteristic sizes, shapes, and morphology, depending on the relative concentration of Mg and Ca ions, were synthesized.     

Hybridization of oligonucleotide by using DNA self-assembled monolayer

The interaction between DNA immobilized on surface and oligonucleotides at the interface is important in detection and diagnostic processes. However, it is difficult to immobilize DNA with maintaining its activity and to realize an efficient hybridization in previous methods. Here, to establish a novel DNA-functionalized surface, the DNA self-assembled monolayer (SAM) was constructed on a gold substrate using thiolated DNA composed of double-stranded (ds) and single-stranded (ss) portion. The DNA SAM was characterized by surface plasmon resonance (SPR), XPS. The hybridization of ss portion of DNA was attempted using the SAM, and in situ monitored by SPR. XPS measurement indicated that the thiolated DNA could form a stable monolayer on a gold substrate through sulfur–gold interaction. SPR measurement implied that the long axis of the DNA standing on the substrate. These results indicated formation of the DNA SAM on the substrate. Hybridization of target DNA containing a complementary sequence for the probe portion was observed by SPR. Moreover, one mismatch of oligonucleotide could be distinguished using the DNA SAM. The SPR result indicates that hybridization of target DNA and probe DNA on the DNA SAM occurs on the DNA SAM.     

Shattering of Peptide ions on self-assembled monolayer surfaces

Time- and collision energy-resolved surface-induced dissociation (SID) of des-Arg(1)- and des-Arg(9)-bradykinin on a fluorinated self-assembled monolayer (SAM) surface was studied by use of a novel Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) specially equipped to perform SID experiments. Time-resolved fragmentation efficiency curves (TFECs) were modeled by an RRKM-based approach developed in our laboratory that utilizes a very flexible analytical expression for the internal energy deposition function capable of reproducing both single- and multiple-collision activation in the gas phase and excitation by collisions with a surface. Both experimental observations and modeling establish a very sharp transition in the dynamics of ion-surface interaction: the shattering transition. The experimental signature for this transition is the appearance of prompt (time-independent) fragmentation, which becomes dominant at high collision energies. Shattering opens a variety of dissociation pathways that are not accessible to slow collisional and thermal ion activation. This results in much better sequence coverage for the singly protonated peptides than dissociation patterns obtained with any of the slow activation methods. Modeling demonstrated that, for short reaction delays, dissociation of these peptides is solely determined by shattering. Internal energies required for shattering transition are approximately the same for des-Arg(1) and des-Arg(9)-bradykinin, resulting in the overlap of fragmentation efficiency curves obtained at short reaction delays. At longer delay times, parent ions depletion is mainly determined by a slow decay rate and fragmentation efficiency curves for des-Arg(1) and des-Arg(9)-bradykinin diverge. Dissociation thresholds of 1.17 and 1.09 eV and activation entropies of -22.2 and -23.3 cal/(mol K) were obtained for des-Arg(1) and des-Arg(9)-bradykinin from RRKM modeling of time-resolved data. Dissociation parameters for des-Arg(1)-bradykinin are in good agreement with parameters derived from thermal experiments. However, there is a significant discrepancy between the thermal data and dissociation parameters for des-Arg(9)-bradykinin obtained in this study. The difference is attributed to the differences in conformations that undergo thermal activation and activation by ion-surface collisions prior to dissociation.     

Gold film surface preparation for self-assembled monolayer studies

Evaporated gold films are frequently used as substrates for the study of biomolecular adsorbates, nanoparticle systems, amd partial and full monolayer films. These studies often benefit from a predeposition cleaning of the surface that removes adventitiously adsorbed material from laboratory contaminants. Scanning tunneling microscopy (STM) is used in this study to explore the microscopic consequences of two pretreatment protocols used in literature reports of self-assembled monolayers, based on sulfochromic and piranha acid solutions. These measurements show that treatment of the Au/mica surface with piranha acid can lead to extensive and uncontrolled etching of the surface and severe disruption of the surface topography; extended exposure causes the precipitation of crystallites on the surface that are highly mobile during STM imaging processes. Exposure of Au/mica surfaces to sulfochromic acid leads to the formation of permanent etch pits of the surface that are exclusively one Au layer deep; extended exposure leads to progressive etching and oxidation of the surface, ultimately leading to the formation of 0.33-0.36 nm high islands on the otherwise flat Au/mica surface. The piranha acid solutions are significantly more likely to cause the Au film to delaminate from the mica support than are the sulfochromic acid solutions. These results show that sulfochromic surface preparation is a direct and reliable method for the elimination of organic residues from Au(111)-textured surfaces, while causing a minimum of structural and chemical surface damage.     

Controlling molecular crystal polymorphism with self-assembled monolayer templates

The control of crystal polymorphism is a long-standing issue in solid-state chemistry, which has many practical implications for a variety of commercial applications. At least four different crystalline forms of 1,3-bis(m-nitrophenyl) urea (MNPU), a classic molecular crystal system, are known to crystallize from solution in various concomitant combinations. Herein we demonstrate that the introduction of gold-thiol self-assembled monolayers (SAMs) of substituted 4'-X-mercaptobiphenyls (X = H, I, and Br) into the crystallization solution can serve as an effective means to selectively template the nucleation and growth of alpha-, beta-, and gamma-MNPU phases, respectively. Polymorph control in the presence of SAM surfaces persists under a variety of solution conditions and consistently results in crystalline materials with high phase purity. The observed selectivity is rationalized on the basis of long-range two-dimensional geometric lattice matching and local complementary chemical interactions at the SAM/crystal interfaces.     

Template-assisted patterning of nanoscale self-assembled monolayer arrays on surfaces

We report a general, simple, and inexpensive approach to pattern features of self-assembled monolayers (SAMs) on silicon and gold surfaces using porous anodic alumina films as templates. The SAM patterns, with feature sizes down to 30 nm and densities higher than 10(10)/cm(2), can be prepared over large areas (>5 cm(2)). The feature dimensions can be tuned by controlling the alumina template structure. These SAM patterns have been successfully used as resists for fabricating gold and silicon nanoparticle arrays on substrates by wet-chemical etching. In addition, we show that arrays of gold features can be patterned with 10-nm gaps between the dots.     

Electrochemical kinetic analysis of a 1,4-hydroxynaphthoquinone self-assembled monolayer

Electroactive 5-hydroxy-3-hexanedithiol-1,4-naphthoquinone (JUG_thio) has been self-assembled on gold. Electrochemical results show the surface coverage is 2.2 × 10⁻¹⁰ mol cm⁻², which is consistent with a dense monolayer. The JUG_thio shows one quasi-reversible and stable voltametric wave in aqueous buffered solution. A kinetic analysis of the redox reactions involving both electron and proton transfer has revealed an unusual behaviour of this molecule due to the presence of the hydroxyl function in the vicinity of the quinone group. The apparent kinetic rate constant and the anodic coefficient transfer of this reaction depend on the pH. In acid medium, a classical concerted 2e⁻/2H⁺ mechanism is obtained. In basic medium (pH > 7), strong intramolecular hydrogen interactions between the quinone and the hydroxyl function have a strong influence on the redox kinetics. These results show that JUG_thio electroactivity is very sensitive to hydrogen interactions in neutral and basic pH solution and is able to act as sensitive layer for electrochemical biosensing.     

Mediator free cholesterol biosensor based on self-assembled monolayer platform

Self-assembled monolayer (SAM) of 4-aminothiophenol (4-ATP) has been investigated for immobilization of bi-enzymes (ChOx and ChEt) towards development of enzyme biosensors for detection of free and total cholesterol. This enzyme immobilized SAM surface has been characterized by scanning electron microscopy and electrochemical measurements. The results of electrochemical response studies reveal fast enzymatic reaction in phosphate buffer saline solution without using any artificial mediator. This may be attributed to the molecular wire type behavior of short 4-ATP molecule that promotes electron transfer between enzyme and the electrode surface due to its conjugated structure. Interference free estimation of free and total cholesterol has been realized at low operating potential of 0.33 V with range of detection as 25 to 400 mg dl(-1), sensitivity of 542.3 nA mM(-1) (for ChOx/4-ATP/Au) and 886.6 nA mM(-1) (for ChEt-ChOx/4-ATP/Au) with a response time of 20 s at pH 7.4.     

Enzymatic nanolithography of a self-assembled oligonucleotide monolayer on gold

This paper describes a simple strategy to biochemically manipulate a surface at the nanoscale by enzyme dip-pen nanolithography using an endonuclease (DNase I) that is directly patterned on a self-assembled monolayer presenting a terminal oligonucleotide. Physisorbed nanopatterns of DNase I carried out nanoscale enzymology at the surface creating oligonucleotide patterns with the fidelity of the patterned enzyme because of the affinity of the enzyme for the immobilized, oligonucleotide substrate.