Mechanochemical preparation of hydrogen-bonded adducts between the diamine 1,4-diazabicyclo[2.2.2]octane and dicarboxylic acids of variable chain length: an X-ray diffraction and solid-state NMR study

Mechanical mixing of solid dicarboxylic acids of variable chain length HOOC(CH(2))(n)COOH (n = 1-7) with solid 1,4-diazabicyclo[2.2.2]octane generates the corresponding salts or co-crystals of the formula [N(CH(2)CH(2))(3)N]-H-[OOC(CH(2))(n)COOH] (n=1-7). Preparation of the same systems from solution has been instrumental for a full characterization of the mechanochemical products by means of single-crystal and powder-diffraction X-ray analyses, as well as by solid-state NMR. The acid-base adducts, whether involving proton transfer from the COOH group to the N-acceptor, that is having ((-))O...H-N((+)) interactions, or the formation of neutral O-H...N hydrogen bonds, show a melting point alternation phenomenon analogous to that shown by the neutral carboxylic acids. The carbon chemical shift tensors of the COOH group obtained from the sideband intensity of low speed spinning NMR spectra provide a reliable criterion for assigning the protonation state of the adducts.     

Well-ordered self-assembled monolayers created via vapor-phase reactions on a monolayer template

The reaction of vapor-phase alkyl isocyanates (O=C=N-(CH2)n-1CH3) with OH-terminated alkanethiol template monolayers on Au produces well-organized self-assembled monolayers, containing intrachain carbamate linkages (Au/S(CH2)16O(C=O)NH(CH2)n-1CH3, where n = 1-8, 11, and 12). X-ray photoelectron spectroscopy, contact angle goniometry, and reflection absorption infrared spectroscopy suggest that the template surface completely reacts with the isocyanates yielding a monolayer that contains an interchain hydrogen-bonded carbamate network. Spectroscopic data indicates that the alkyl underlayer remains well ordered following reaction with the isocyanates. The order of the overlayer and the hydrogen-bonding interactions between adjacent chains increase as a function of the alkyl isocyanate chain length, n. The overlayer appears to be well ordered for n > or = 5.     

Effect of load on structural and frictional properties of alkanethiol self-assembled monolayers on gold: some odd-even effects

We have conducted molecular dynamics simulations to study the frictional properties of alkanethiols CH(3)(CH(2))(n-1)SH (Cn, 12 ≤ n ≤ 15) self-assembled monolayers (SAMs) on Au(111) surfaces, under various loading and shearing conditions. For the examined alkanethiols, we found some evidence of the friction coefficient being dependent on the number of carbon atoms in the molecule being odd or even. Alkanethiols with n = odd show consistently higher friction coefficients than those with n = even. Such odd-even effect seems to be independent of the sliding velocity. However, the effect is significant only at lower loads (<700 MPa). The structural origin of this odd-even effect has been discussed. The effect of loading on the structure is also studied. For dodecanethiol (n = 12) we find the film responds to increased loading initially by increasing the tilt and then by deformation of individual molecules. SAM-Au contacts under shear show periodic storage and release of energy and a clear stick-slip pattern in the shear stress, film thickness, and the tilt and tilt orientation angles.     

Complexity in the self-assembly of bifunctional molecules on HOPG: the influence of solvent functionality on self-assembled structures

Self-assembled monolayers of bifunctional molecules HOOC(CH2)nCOOH (n = 20, 18, 16, 14, 12, 10), HOOC(CH2)nCH2OH (n = 13, 14), and HOCH2(CH2)14CH2OH dissolved in octanoic acid were investigated using scanning tunneling microscopy, to understand the self-assembly of bifunctional molecules and the influence of a carboxylic acid solvent on the formation of self-assembled structures on HOPG. In the series of di-acids (HOOC(CH2)nCOOH), only HOOC(CH2)20COOH forms stable coadsorption structures with the solvent octanoic acid. The remaining di-acids form stable single-component monolayers and do not coadsorb with solvent octanoic acid. Coadsorption structures involving mixtures of di-acids were observed. This result suggests that coadsorption with acid solvent or with other di-acids occurs to maximize hydrogen-bond density in the overlayer. A quantitative model based on this concept is proposed. For hetero-bifunctional molecules HOOC(CH2)nCH2OH (n = 13, 14), the coadsorption of HOOC(CH2)14CH2OH and octanoic acid at the molecular level produces a microscopic mesh made of homogeneously arranged openings with a dimension of approximately 12.5 A x approximately 5.0 A x approximately 1.8 A. For the hetero-bifunctional molecule HOOC(CH2)13CH2OH, hydroxyl groups of two adjacent lamellae assemble to form a herringbone geometry, and the two carboxylic acid groups assemble with a straight head-to-head configuration. In addition, a new mixed hydrogen-bonding network of COOH...O-H was observed in another self-assembled structure of this molecule. The bifunctional molecule HOCH2(CH2)14CH2OH exhibits multiple packing patterns on HOPG via different hydrogen-bonding networks. HOCH2(CH2)14CH2OH self-assembles using the H-O...O-H network typical of the n-alcohol herringbone structure, forming an asymmetric adsorbate on HOPG. It also forms domains with another hydrogen-bonding network, in which molecules in adjacent lamellae are parallel to each other. This investigation demonstrates the complexity and diversity of self-assembled structures formed from bifunctional molecules on solid surfaces. It also indicates that a solvent with the same functional group as the solute can significantly impact the formation of the self-assembled structures of these bifunctional molecules.     

Stability constants of some bivalent first row transition metal chelates of dicarboxylic acids containing ether linkages

The stability constants of the Mn(2+), Fe(2+), Co(2+), Ni(2+), Cu(2+) and Zn(2+) complexes with four acids of the type HOOCCH(2)O(CH(2)CH(2)O)(n) CH(2)COOH (n = 0-3) are reported. For n = 0 the constants are in the Irving-Williams order, but not for n = 1-3.     

Odd-even effects on the structure, stability, and phase transition of alkanethiol self-assembled monolayers

Molecular dynamics simulations were conducted to predict the structural properties and phase transition temperatures of n-alkanethiols CH(3)(CH(2))(n-1)SH (Cn, 4 ≤ n ≤ 22) self-assembled monolayers (SAMs) on Au (111) surfaces. We studied the effects of chain length on the structural properties, including tilt and orientation angles, and on phase transition temperature. We found clear dependence of the structural properties, on both the number of carbon atoms, n; and on n being odd or even. Alkanethiols with n ≤ 7 show liquid-like behavior and large rotational mobility, whereas those with n ≥ 12 are well-ordered and stable. For 12 ≤ n ≤ 15, odd-even effects are observed, where for n = odd, larger tilt angles, oriented in the direction of their next next nearest neighbor (NNNN), and for n = even, lower tilt angles, mostly tilted toward next nearest neighbor (NNN), were observed. For 15 ≤ n ≤ 19, we find tilt angle and orientation to be independent of n. For all alkanethiols, a gradual decrease of the tilt angle occurred by increasing the temperature from 300 to 420 K. Order-disorder phase transitions occurred at a certain temperature. This was signified by abrupt instabilities in the tilt orientation angle. This transition temperature showed an enhancement of ～67-100 °C over the melting point of the corresponding n-alkane bulk system. This enhancement depended on n, and was larger for n = odd. Overall, we found that odd alkanethiols show better structural and thermal stability, and smaller gauche defects.     

Fatty acid Langmuir films on liquid mercury: X-ray and surface tension studies

The structure and phase behavior of liquid-mercury-supported molecular films of fatty acids (CH3(CH2)n-2COOH, denoted CnOOH) were studied for molecular lengths 7 < or = n < or = 24, by surface tensiometry and X-ray methods. Two qualitatively different film structures were found, depending on coverage. For high coverage, the film consists of a monolayer of roughly surface-normal molecules, showing a pressure-dependent sequence of structures similar, though not identical, to that of the corresponding water-supported Langmuir films. At low coverage, phases consisting of surface-parallel molecules are found, not observed on the aqueous subphases employed to date. In this range, a two-dimensional (2D) gas followed by a single and, for 14 < or = n < or = 24, also by a double layer of surface-parallel molecules is found as coverage is increased. Depending on chain length, the flat-lying phases have a crystalline 2D-ordered, a smectic-like 1D-ordered, or a disordered in-plane structure consisting of molecular dimers. The structure and thermodynamics of the films are discussed.     

取代环戊二烯的合成和^1HNMR谱

本文研究了苯基锂和对、间、邻甲苯基锂及对、邻甲氧苯基锂与6,6-二烷基富烯环外双键加成反应的立体效应。在室温下于乙醚溶剂中,6,6-二烷基富烯同上述芳基锂反应,形成取代环戊二烯基锂,经水解给出含或不含手性碳的叔烷基环戊二烯。     

取代苯甲酸和双(η~5-环戊二烯基)-双(取代苯甲酸)钼(Ⅳ)配合物的羰基和羟基振动频率的研究

本文研究了取代苯甲酸的羰基和羟基伸缩振动频率与苯环上取代基的Hammett常数σ值之间的线性关系;双(η~5-环戊二烯基)-双(取代苯甲酸)钼(Ⅳ)配合物[Cp_2Mo(O_2CC_6H_4X)_2](Cp=环戊二烯基;X=m-或p-NO_2、F、Cl、Bf、I、CH3、OCH_3、H)的羰基伸缩振动频率与取代基的σ值之间的线性关系,及Cp_2Mo(O_2CC_6H_4X)_2中苯甲酸根的配位方式。本文还提供了一个利用分辨率较低的仪器,比较精确地读出峰位的简便方法。     

具有三维网络的新型配位聚合物[Nd(C7H6NO2)3.H2O]n的合成、结构和性质

以Nd(NO3).6H2O和NH2C6H4COOH为原料,经[Nd(C7H6NO2)3.H2O]的自组装,得到了具有三维网络结构的配位聚合物[Nd(C7H6NO2)3.H2O]n。该聚合物晶体属单斜晶系,空间群P2(1)/n,a=0.98069(5)nm,b=2.2736(2)nm,c=0.98254(8)nm,β=100.053(5)°,V=2.1571(3)nm^3,Z=4。最后的一致性因子R=0.038。磁性研究表明,该化合物在低温下表现出反铁磁性质。测定了化合物的UV-vis-NIR和IR光谱,进行了分析和指认。     

Odd-even effects in self-assembled monolayers of omega-(biphenyl-4-yl)alkanethiols: a first-principles study

Conjugated molecules with a saturated alkyl linker between a thiol docking group and the pi-conjugated core have been shown to form self-assembled monolayers (SAMs) with a high degree of long-range order and uniformity. Additionally, pronounced odd-even effects have been observed in a number of properties characterizing these SAMs. We focus on omega-(biphenyl-4-yl)alkanethiols with n = 0-6 -(CH2)n- units deposited on Au(111) and investigate the microscopic origin of these odd-even effects in terms of the local sulfur-gold bonding geometry by employing first-principles calculations. An additional structural parameter, the torsion angle between the two phenyl rings in the biphenyl moiety, is identified and its relation to the experimentally observed odd-even effects is discussed. More importantly, we address relevant quantities for the application of these SAMs in molecular electronic devices, in particular, the modification of the work function of the underlying metal substrate and the energetic alignment of the molecular orbitals in the SAM with the Fermi level. While no clear trend emerges for the former, we find pronounced odd-even effects for the latter. Furthermore, the insertion of a single methylene unit between the biphenyl core and the thiol appears to largely decouple the valence electronic systems of the pi-conjugated segment and the gold substrate. Our results thus provide a solid theoretical basis for the interface energetics in this important class of systems.     

Packing density of HS(CH2)(n)COOH self-assembled monolayers

Self-assembled monolayers (SAMs) of HS(CH(2))(n)COOH, n = 5, 10, 15 deposited from ethanol solution onto gold are prepared by five approaches, and their packing densities are evaluated by X-ray photoelectron spectroscopy (XPS) measurements. The five approaches are: (1) direct deposition; (2) acetic-acid-assisted deposition; (3) butyl-amine-assisted deposition; (4) displacement of a preformed HS(CH(2))(n)CH(3) (n = 5, 10, 15) SAMs; and (5) co-deposition with HS(CH(2))(n)CH(3) (n = 5, 10, 15). Packing density metrics are calculated from measurements of SAM and substrate photoemission intensities and their attenuations by two methods. In one case the attenuated photoemissions are expressed as a ratio relative to comparable measurements on an experimental HS(CH(2))(n)CH(3) model system. In the other case a new method is introduced where a calculated attenuation based on theoretical random coil and extended chain models is used as the reference to determine a packing density fraction. Packing densities are also correlated with the S2p(Au-bonded):Au4f peak area ratios and with shifts in the C1s binding energies. SAMs prepared by the direct deposition are a partial multilayer where a second molecular layer is physisorbed onto the SAM and not removable by solvent washing. The addition of acetic acid to the deposition solution disrupts dimer associations of HS(CH(2))(n)COOH in solution and at the surface of the monolayer and yields the most ordered monolayer with the highest density of -COOH groups. The addition of butyl amine results in a labile ammonium carbonate ion pair formation but results in a lower packing density in the SAM. The displacement of the preformed HS(CH(2))(n)CH(3) SAM and the co-deposition of HS(CH(2))(n)CH(3) with HS(CH(2))(n)COOH result in SAMs with little incorporation of the -COOH component.     

Syntheses, structures, and anion-binding properties of two novel calix[2]benzo[4]pyrroles

Calix[2]benzo[4]pyrrole m-6 and p-6, each containing two dipyrromethane moieties and two m-phenylene or p-phenylene units, respectively, were readily synthesised from pyrrole, 1,3- and 1,4-bis(1,1'-dimethylhydroxymethyl)benzene, (m-4 and p-4, respectively) and acetone. Macrocycles m-6 and p-6 were tested as receptors for a selection of anions, such as acetate, dihydrogenphosphate and fluoride. The X-ray structures of m-6 and p-6 and those of the complexes m-6F(-), m-6Cl(-) and m-6CH(3)COO(-) (with an nBu(4)N(+) counterion) were also determined.     

水相法合成双(环戊二烯基)钛氨基酸配合物的研究

以N-(取代苯基)氨基乙酸及盐与双(环戊二烯基)二氯化钛在水相及有机相反应,得到了五个双(环戊二烯基)钛氨基酸配合物,对配合物进行了熔点、元素分析、IR及^1HNMR的表征,确定了它们的结构。这些配合物在空气中稳定。经比较,水相中的合成反应速度快,操作简便,产物较易分离,产率高。     

Adsorption kinetics of 1-alkanethiols on hydrogenated Ge(111)

We have investigated the liquid-phase self-assembly of 1-alkanethiols (HS(CH2)n-1CH3, n = 8, 16, and 18) on hydrogenated Ge(111), using attenuated total reflection Fourier transform infrared spectroscopy as well as water contact angle measurements. The infrared absorbance of C-H stretching modes of alkanethiolates on Ge, in conjunction with water contact angle measurements, demonstrates that the final packing density is a function of alkanethiol concentration in 2-propanol and its chain length. High concentration and long alkyl chain increase the steady-state surface coverage of alkanethiolates. A critical chain length exists between n = 8 and 16, above which the adsorption kinetics is comparable for all long alkyl chain 1-alkanethiols. The steady-state coverage of hexadecanethiolates, representing long-chain alkanethiolates, reaches a maximum at approximately 5.9 x 10(14) hexadecanethiolates/cm2 in 1 M solution. The characteristic time constant to reach a steady state also decreases with increasing chain length. This chain length dependence is attributed to the attractive chain-to-chain interaction in long-alkyl-chain self-assembled monolayers, which reduces the desorption-to-adsorption rate ratio (kd/ka). We also report the adsorption and desorption rate constants (ka and kd) of 1-hexadecanethiol on hydrogenated Ge(111) at room temperature. The alkanethiol adsorption is a two-step process following a first-order Langmuir isotherm: (1) fast adsorption with ka = 2.4 +/- 0.2 cm3/(mol s) and kd = (8.2 +/- 0.5) x 10(-6)(s-1); (2) slow adsorption with ka = 0.8 +/- 0.5 cm3/(mol s) and kd = (3 +/- 2) x 10(-6) s(-1).     

Synthesis of a series of oligo(ethylene glycol)-terminated alkanethiol amides designed to address structure and stability of biosensing interfaces.

A strategy for the synthesis of a series of closely related oligo(ethylene glycol)-terminated alkanethiol amides (principally HS(CH(2))(m)CONH(CH(2)CH(2)O)(n)H; m = 2, 5, 11, 15, n = 1, 2, 4, 6, 8, 10, 12) and analogous esters has been developed. These compounds were made to study the structure and stability of self-assembled monolayers (SAMs) on gold in the prospect of designing new biosensing interfaces. For this purpose, monodisperse heterofunctional oligo(ethylene glycols) with up to 12 units were prepared. Selective monoacylation of the symmetrical tetra- and hexa(ethylene glycol) diols as their mesylates with the use of silver(I) oxide was performed. The synthetic approach was based on carbodiimide couplings of various oligo(ethylene glycol) derivatives to omega-(acetylthio) carboxylic acids via a terminal amino or hydroxyl function. SAM structures on gold were studied with respect to thickness, wettability (water contact angles approximately 30 degrees ), and conformation. A good fit was obtained for the relation between monolayer thickness (d) and the number of units in the oligo(ethylene glycol) chain (n): d = 2.8n + 21.8 (A). Interestingly, the corresponding infrared spectroscopy analysis showed a dramatic change in conformation of the oligomeric chains from all-trans (n = 4) to helical (n > or = 6) conformation. A crystalline helical structure was observed in the SAMs for n > 6.     

Charge injection across self-assembly monolayers in organic field-effect transistors: odd-even effects

We investigate the role of self-assembly monolayers in modulating the response of organic field-effect transistors. Alkanethiol monolayers of chain length n are self-assembled on the source and drain electrodes of pentacene field-effect transistors. The charge carrier mobility mu exhibits large fluctuations correlated with odd-even n. For n < 8, mu increases by 1 order of magnitude owing to the decrease of the hole injection barrier and the improved molecular order at the organic-metallic interface. For n > or = 8, mu decays exponentially with an inverse decay length beta = 0.6 A(-1). Our results show that (i) charge injection across the interface occurs by through-bond tunneling of holes mediated by the alkanethiol layer; (ii) in the long-chain regime, the charge injection across the alkanethiol monolayer completely governs the transistor response; (iii) the transistor is a sensitive gauge for probing charge transport across single monolayers. The odd-even effect is ascribed to the anisotropic coupling between the alkanethiol terminal sigma bond and the HOMO level of ordered pentacene molecules.     

Water evaporation rates across hydrophobic acid monolayers at equilibrium spreading pressure

The effect of alkanoic acid [CH(3)(CH(2))(n-2)COOH; HCn] and perfluoroalkanoic acid [CF(3)(CF(2))(n-2)COOH; FCn] monolayers on the water evaporation rate was investigated by thermogravimetry tracing the decrease in amount of water with time. The evaporation rate from the surface covered by a monolayer was measured as a function of temperature and hydrophobic chain length of the acids, where the monolayer was under an equilibrium spreading pressure. From thermal behavior of the crystallized acids, their solid states are C-type in crystalline state over the temperature range from 298.2 to 323.2 K. The dry air was flowed through a furnace tube of a thermogravimetry apparatus at the flow rate of 80 mL min(-1), where the evaporation rate becomes almost constant irrespective of the flow rate. The temperature dependence of the evaporation rate was analyzed kinetically to evaluate the activation energy and thermodynamics values for the activated complex, which demonstrated that these values were almost the same for both alkanoic acids and perfluoroalkanoic acids, although the effect of perfluoroalkanoic acids on the evaporation rate was smaller than that of corresponding hydrogenated fatty acids. The difference in the evaporation rate between FCn and HCn was examined by atomic force microscopy (AFM), Brewster angle microscopy (BAM), surface potential (DeltaV) at equilibrium spreading pressure, and Langmuir curve (pi-A isotherm), and their results were consistent and supported the difference.     

Organotin and organogermanium linkers for simple, direct functionalization of polyoxotungstates

Fifteen Keggin-anion-derived polytungstates [TW11O39[MCH2CH2X]]n- (T = Si, Ge, Ga; M = Sn, Ge; X = COOH, COOCH3, CONH2, CN; n = 5, 6) were prepared in aqueous or aqueous-organic solution from the corresponding lacunary polytungstates and trichlorotin and -germanium precursors, and were isolated as caesium salts. The derivatized polytungstates were characterized by elemental analysis, multinuclear NMR spectroscopy, and cyclic voltammetry; they are stable in aqueous solution to pH 6-7. NMR spectroscopy revealed the presence of a second (beta1 or beta3) isomer in the tungstogallate derivatives. Acid hydrolysis of the ester and nitrile derivatives could be achieved without decomposition of the polytungstate moieties, and esterification and amidation of the carboxylate functions was straightforward using standard coupling techniques, e.g. the formation, isolation and characterization of [SiW11O39[Ge(CH2)2CONHCH2COOCH3]]5- from glycine methyl ester. Since the Cl3MCH2CH2X precursors are readily accessible by hydrostannation/germanation reactions with the corresponding alkenes, novel coupled polytungstates, such as [(SiW11O39GeCH2CH2COOCH2)4C]20- from pentaerythritol tetraacrylate, can also be prepared.     

Heat-shrinking spherical and columnar supramolecular dendrimers: their interconversion and dependence of their shape on molecular taper angle

Synthesis and modes of self-assembly are described for the tapered monodendritic molecules 3,4,5-nGi-X of generation i = 1, 2, 3 (see structures below) that contain multiple (CH2)nH alkyl chains on their periphery (n = 12, 14, 16) and a polar group X at the apex (X = COOH, COONa, COOCs, CO(OCH2CH2)3OH). These monodendrons self-assemble into supramolecular cylindrical or spherical dendrimers, which in turn self-organise into p6mm columnar or Pm3n cubic thermotropic liquid crystals, respectively. The two principal ways of affecting the self-assembly of these compounds by means of their molecular architecture are: a) by changing the width of the wide (aliphatic) end, and b) by changing the volume at the apex. In the present work a) is controlled through temperature (conformational disorder) and b) is controlled by chaging the generation number i or the size of X, for example, through the choice of metal cation. The single most important geometric parameter of these dendritic building blocks is the molecular solid angle (taper angle) alpha; a high alpha leads to spherical and a low alpha to cylindrical supramolecular dendrimers. Furthermore, alpha also determines the equilibrium size of the supramolecular objects; a larger alpha results in a smaller diameter. The unusually strong negative thermal expansion coefficient of the cubic and columnar lattice is attributed to the excess of the increasingly highly tapered molecules being rejected from their parent aggregates and reassembling as new ones. Increasing alpha is also considered to be responsible for the observed thermotropic columnar-cubic transition.