Au/Pd(111)双金属表面催化噻吩加氢脱硫的反应机理

采用密度泛函理论(DFT)计算了Pd(111)表面含有N(N=1-4)个Au原子数目时的表面形成能,选取最优构型进一步研究了噻吩在Au/Pd(111)双金属表面的吸附模式及加氢脱硫反应过程.结果表明:当Pd(111)表面含有1个Au原子时,其形成能最低.在Au/Pd(111)双金属表面噻吩初始吸附于Pd-Hcp-30°位时,其构型最稳定.在各加氢脱硫过程中,反应总体均放出热量.对于直接脱硫机理,其所需活化能较低,但脱硫产物较难控制;对于间接脱硫机理,反应最有可能按照顺式加氢方式进行,C―S键断裂开环时所需活化能最高,是反应的限速步骤.此外,与单一Au(111)面及Pd(111)面相比,Au/Pd(111)双金属表面限速步骤的反应能垒最低,表明AuPd双金属催化剂比Au、Pd单金属催化剂更有利于噻吩加氢脱硫反应的进行.     

Au/Pd(111)双金属表面催化噻吩加氢脱硫的反应机理

采用密度泛函理论（DFT）计算了Pd（111）表面含有N（N=1-4）个Au原子数目时的表面形成能,选取最优构型进一步研究了噻吩在Au/Pd（111）双金属表面的吸附模式及加氢脱硫反应过程. 结果表明：当Pd（111）表面含有1个Au原子时,其形成能最低. 在Au/Pd（111）双金属表面噻吩初始吸附于Pd-Hcp-30°位时,其构型最稳定. 在各加氢脱硫过程中,反应总体均放出热量. 对于直接脱硫机理,其所需活化能较低,但脱硫产物较难控制;对于间接脱硫机理,反应最有可能按照顺式加氢方式进行,C―S键断裂开环时所需活化能最高,是反应的限速步骤. 此外,与单一Au（111）面及Pd（111）面相比,Au/Pd（111）双金属表面限速步骤的反应能垒最低,表明AuPd双金属催化剂比Au、Pd单金属催化剂更有利于噻吩加氢脱硫反应的进行.     

Short-time behavior of mixed diffusion-barrier controlled adsorption

This paper focuses on the short-time adsorption kinetics of nonionic surfactants onto water/air surfaces, analyzed in the context of the mixed diffusion-barrier controlled adsorption modeling framework. Specifically, we reconcile the apparent contradiction between theoretical prediction and experimental observations on the adsorption kinetics mechanism at short times: while the mixed diffusion-barrier controlled model predicts a barrier-controlled adsorption, as well as the impossibility of a diffusion-controlled adsorption at asymptotic short times, the short-time experimental dynamic surface tension (DST) behavior of many nonionic surfactants has been interpreted to result from diffusion-controlled adsorption at asymptotic short times. This is because the short-time experimental DST of these surfactants displays a t variation, which is considered as a fingerprint for the existence of diffusion-controlled adsorption, based on the short-time asymptotic behavior of the diffusion-controlled adsorption model. As a result of this interpretation, the fundamental physical nature of the energy barrier has been proposed to be associated with high surfactant surface concentrations. In this paper, we derive a new nonasymptotic short-time formalism of the mixed diffusion-barrier controlled model to describe surfactant adsorption onto a spherical pendant-bubble surface, including determining the ranges of time and surfactant surface concentration values where the short-time formalism is applicable. Based on this formalism, we find that one can expect to observe an apparent t variation of the DST at short times even for the mixed diffusion-barrier controlled adsorption model. We analyze the consequence of this finding by re-evaluating the existing notions of the energy barrier. We conclude that the energy barrier is associated with the adsorption of a single surfactant molecule onto a clean surface.     

Sensitivity of PSA process performance to input variables

Mathematical models for pressure swing adsorption (PSA) processes essentially require the simultaneous solutions of mass, heat and momentum balance equations for each step of the process using appropriate boundary conditions for the steps. The key model input variables needed for estimating the separation performance of the process are the multicomponent adsorption equilibria, kinetics and heats of adsorption for the system of interest. A very detailed model of an adiabatic Skarstrom PSA cycle for production of high purity methane from a ethylene-methane bulk mixture is developed to study the sensitivity of the process performance to the input variables. The adsorption equilibria are described by the heterogeneous Toth model which accounts for variations of isosteric heats of adsorption of the components with adsorbate loading. A linear driving force model is used to describe the kinetics. The study shows that small errors in the heats of adsorption of the components can severely alter the overall performance of the process (methane recovery and productivity). The adsorptive mass transfer coefficients of the components also must be known fairly accurately in order to obtain precise separation performance.     

Chirality- and diameter-dependent reactivity of NO2 on carbon nanotube walls

We report the density-functional calculations of NO2 adsorption on single-walled carbon nanotube walls. A single molecular adsorption was endothermic with an activation barrier, but a collective adsorption with several molecules became exothermic without an activation barrier. We find that NO2 adsorption is strongly electronic structure- and strain-dependent. The NO2 adsorption on metallic nanotubes was energetically more favorable than that on semiconducting nanotubes and furthermore the adsorption became less stable with increasing diameters of nanotubes. The adsorption barrier height shows similar dependence on the electronic structure and diameter to the adsorption energy. Our theoretical model can be a good guideline for the separation of nanotubes by electronic structures using various adsorbates.     

Mechanism of the Aerobic Homocoupling of Phenylboronic Acid on Au20−: A DFT Study

The mechanism of the gold nanocluster‐catalyzed aerobic homocoupling of arylboronic acids has been elucidated by means of DFT calculations with Au₂₀^? as a model cluster for the Au:[poly(N‐vinylpyrrolidin‐2‐one)] catalyst. We found that oxygen affects the adsorption of phenylboronic acid and, by lowering the energy barrier, a water molecule enhances dissociation of the C?B bond, which is probably the rate‐determining step. The key role of oxygen is in activating the surface of the gold cluster by generating Lewis acidic sites for adsorption and activation of the phenylboronic acid, leading to the formation of biphenyl through a superoxo‐like species. Moreover, the oxygen adsorbed on the Au nanocluster can act as an oxidant for phenylboronic acid, giving phenol as a byproduct. As shown by NBO analysis, the basic aqueous reaction medium facilitates the reductive elimination process by weakening the Au?C bond, thereby enhancing the formation of biphenyl. The coupling of phenyl and reductive elimination of biphenyl occur at the top or facet site with low‐energy‐barrier through spillover of phenyl group on Au NC. The present findings are useful for the interpretation or design of other coupling reactions with Au NC.     

Kinetic modeling of liquid-phase adsorption of phosphate on dolomite

The adsorption of phosphate from aqueous solution on dolomite was investigated at 20 and 40 degrees C in terms of pseudo-second-order mechanism for chemical adsorption as well as an intraparticle diffusion mechanism process. Adsorption was changed with increased contact time, initial phosphate concentration, temperature, solution pH. A pseudo-second-order model and intraparticle diffusion model have been developed to predict the rate constants of adsorption and equilibrium capacities.The activation energy of adsorption can be evaluated using the pseudo-second-order rate constants. The adsorption of phosphate onto dolomite are an exothermically activated process. A relatively low activation energy and a model highly fitting to intraparticle diffusion suggest that the adsorption of phosphate by dolomite may involve not only physical but also chemisorption. This was likely due to its combined control of chemisorption and intraparticle diffusion. However, for phosphate/dolomite system chemical reaction is important and significant in the rate-controlling step, and for the adsorption of phosphate onto dolomite the pseudo-second-order chemical reaction kinetics provides the best correlation of the experimental data.     

Quantum chemical studies on hydrogen adsorption in carbon-based model systems: role of charged surface and the electronic induction effect

Quantum chemical studies on the molecular hydrogen adsorption in a six-membered carbon ring has been undertaken to mimic the adsorption process in carbon nanotubes, considering the fact that the six-membered carbon ring is found to be one of the basic units of the carbon nanotubes and fullerenes. Our results reveal that the carbon surface as such is not a good candidate for hydrogen adsorption but a charged surface created by doping of an alkali metal atom can play an important role for the improvement in adsorption of molecular hydrogen. The strength of hydrogen interaction as well as the number of hydrogen molecules that can be adsorbed on the system is found to depend on the nature of the cation doped in the system. We have also studied the role of electronic induction by substituting different functional groups in the model system on the hydrogen adsorption energy. The results demonstrate that the binding energy of the cation with the carbon surface as well as the hydrogen adsorption energy can be tuned significantly through the use of suitable substituents. In addition, we have shown that the extended planar or the curved carbon surface of the coronene system alone may not be suitable for an effective molecular hydrogen adsorption. In essence, our results reveal that the ionic surface with a significant degree of curvature will enhance the hydrogen adsorption effectively.     

A Mechanistic Approach to Modeling Single Protein Adsorption at Solid-Water Interfaces

A kinetic model for single component protein adsorption which can be readily extended to adsorption from multi-protein solutions was developed, and used to simulate adsorption of site-directed, structural stability mutants of bacteriophage T4 lysozyme. The model allows for two different adsorbed "states," distinguished by different binding strengths and different occupied areas. The presence of an increasing energy barrier to adsorption was incorporated into the model by formulating the adsorption rate constants as functions of time. Numerical analysis was performed using the Marquardt method. Estimated model parameters were consistent with the effect of structural stability on adsorption. In particular, kinetic parameters were such that adsorption into the more tightly bound, conformationally altered state was favored by less stable variants. Copyright 1999 Academic Press.     

Removal of Cd(II) from aqueous solutions using clarified sludge

Clarified sludge is a major waste generating during steel making process. In India and in most industrial countries, the use of clarified sludge as a road ballast and land filter has had a very long history. In present study, clarified sludge has been characterized and used for the removal of Cd(II) from aqueous solutions. The effect of pH, adsorbent dosage, adsorbate concentration, contact time and temperature on adsorption process was studied in batch experiments. Kinetics data were best described by pseudo-second order model. The effective diffusion co-efficient of Cd(II) is of the order of 10(-11) m(2)/s. The maximum uptake was 36.23 mg/g. The adsorption data can be well described by Langmuir isotherm. The result of the equilibrium studies showed that the solution pH was the governing factor affecting the adsorption. Mass transfer analysis was also carried out for the adsorption process. The thermodynamic studies indicated that the adsorption was spontaneous and exothermic in nature. The sorption energy calculated from Dubinin-Radushkevich isotherm indicated that the adsorption process is chemical in nature. Desorption as well as the application studies were carried out considering the economic viewpoint of wastewater treatment plant operations.     

Acrylate formation via metal-assisted C-C coupling between CO2 and C2H4: reaction mechanism as revealed from density functional calculations

The reaction path for the formation of a binuclear hydrido-acrylate complex in a CO(2)-C(2)H(4) coupling process is explored in detail by locating the key intermediates and transition states on model potential energy surfaces derived from density functional calculations on realistic models. The formation of the new C-C bond is shown to take place via oxidative coupling of coordinated CO(2) and C(2)H(4) ligands resulting in a metalla-lactone intermediate, which can rearrange to an agostic species allowing for a beta-hydrogen shift process. The overall reaction is predicted to be clearly exothermic with all intermediates lying below the reactants in energy, and the highest barrier steps correspond to C-C coupling and beta-hydrogen transfer. The phosphine ligands are found to play an important role in various phases of the reaction as their dissociation controls the coordination of CO(2), the formation of the agostic intermediate, and the dimerization process; furthermore, their presence facilitates the oxidative coupling by supplying electrons to the metal center. Our results provide a theoretical support for the reaction mechanism proposed from experimental observations. The effect of the solvent medium on the relative energy of reaction intermediates and transition states is examined and found important in order to predict reliable energetics.     

Free energy of adsorption of water and metal ions on the [1014] calcite surface

We calculated the free energy profiles of water and three metal ions (magnesium, calcium, and strontium) adsorbing on the [1014] calcite surface in aqueous solution. The approach uses molecular dynamics with parametrized equations to describe the interatomic forces. The potential model is able to reproduce the interactions between water and the metal ions regardless of whether they are at the mineral surface or in bulk water. The simulations predict that the free energy of adsorption of water is relatively small compared to the enthalpy of adsorption calculated in previous papers. This suggests a large change in entropy associated with the water adsorption on the surface. We also demonstrate that the free energy profile of a metal ion adsorbing on the surface correlates with the solvent density and that the rate of formation of an innersphere complex depends on overcoming a large free energy barrier, which is mainly electrostatic in nature. Furthermore, comparison among the rates of desorption of magnesium, calcium, and strontium from the calcite surface suggests that magnesium has a much lower rate of desorption due to its strong interactions with both water and the surface.     

Thermodynamic and kinetic parameters of ofloxacin adsorption from aqueous solution onto modified coal fly ash

Batch adsorption experiments were carried out for the removal of ofloxacin from aqueous solution using modified coal fly ash as adsorbent. The effects of various parameters such as contact time, initial solution concentration and temperature on the adsorption system were investigated. The optimum contact time was found to be 150 min. The adsorption isotherm data fit well with the Langmuir model, and the kinetic data fit well with the pseudo-second order and the intra-particle diffusion model. Intra-particle diffusion analysis demonstrates that ofloxacin diffuses quickly among the particles at the beginning of the adsorption process, and then the diffusion slows down and stabilizes. Thermodynamic parameters such as ΔG, ΔH, and ΔS were also calculated. The negative Gibbs free energy change and the positive enthalpy change indicated the spontaneous and endothermic nature of the adsorption, and the positive entropy change indicated that the adsorption process was aided by increased randomness.     

Reaction of hydrogen with Ag(111): binding states, minimum energy paths, and kinetics

The interaction of atomic and molecular hydrogen with the Ag(111) surface is studied using periodic density functional total-energy calculations. This paper focuses on the site preference for adsorption, ordered structures, and energy barriers for H diffusion and H recombination. Chemisorbed H atoms are unstable with respect to the H(2) molecule in all adsorption sites below monolayer coverage. The three-hollow sites are energetically the most favorable for H chemisorption. The binding energy of H to the surface decreases slightly up to one monolayer, suggesting a small repulsive H-H interaction on nonadjacent sites. Subsurface and vacancy sites are energetically less favorable for H adsorption than on-top sites. Recombination of chemisorbed H atoms leads to the formation of gas-phase H(2) with no molecular chemisorbed state. Recombination is an exothermic process and occurs on the bridge site with a pronounced energy barrier. This energy barrier is significantly higher than that inferred from experimental temperature-programmed desorption (TPD) studies. However, there is significant permeability of H atoms through the recombination energy barrier at low temperatures, thus increasing the rate constant for H(2) desorption due to quantum tunneling effects, and improving the agreement between experiment and theory.     

酸性分子筛催化乙烯二聚反应

应用密度泛函理论(DFT), 采用5T簇模型来模拟分子筛催化剂的酸性位, 在B3LYP/6-311+G(3df, 2p)的条件下通过理论计算研究了乙烯在酸性分子筛上的二聚反应. 对反应各驻点进行了全局优化, 经过零点能校正后, 计算得出乙烯二聚反应的活化能. 研究表明, 乙烯在分子筛上的二聚反应分三步进行: 单个乙烯分子化学吸附→第二个乙烯分子的物理吸附→两乙烯分子二聚反应. 乙烯化学吸附生成的烷氧化合物与物理吸附的乙烯分子发生二聚反应生成新的C—C键同时生成新的烷氧化合物. 计算得到的乙烯化学吸附和二聚反应的反应能垒分别为108和149 kJ·mol-1. 反应的逆过程也就是1-丁烯在酸性分子筛表面的1-丁基烷氧化合物发生β分裂反应, 计算所得相应的1-丁烯β分裂反应的能垒为217 kJ·mol-1, 远高于相应的乙烯二聚反应能垒. 此外还进一步研究了所用基组对计算结果的影响.     

Quantitative description of the relation between protein net charge and protein adsorption to air-water interfaces

In this study a set of chemically engineered variants of ovalbumin was produced to study the effects of electrostatic charge on the adsorption kinetics and resulting surface pressure at the air-water interface. The modification itself was based on the coupling of succinic anhydride to lysine residues on the protein surface. After purification of the modified proteins, five homogeneous batches were obtained with increasing degrees of modification and zeta-potentials ranging from -19 to -26 mV (-17 mV for native ovalbumin). These batches showed no changes in secondary, tertiary, or quaternary structure compared to the native protein. However, the rate of adsorption as measured with ellipsometry was found to decrease with increasing net charge, even at the initial stages of adsorption. This indicates an energy barrier to adsorption. With the use of a model based on the random sequential adsorption model, the energy barrier for adsorption was calculated and found to increase from 4.7 kT to 6.1 kT when the protein net charge was increased from -12 to -26. A second effect was that the increased electrostatic repulsion resulted in a larger apparent size of the adsorbed proteins, which went from 19 to 31 nm2 (native and highest modification, respectively), corresponding to similar interaction energies at saturation. The interaction energy was found to determine not only the saturation surface load but also the surface pressure as a function of the surface load. This work shows that, in order to describe the functionality of proteins at interfaces, they can be described as hard colloidal particles. Further, it is shown that the build-up of protein surface layers can be described by the coulombic interactions, exposed protein hydrophobicity, and size.     

Theoretical studies of O-O bond formation in photosystem II

The most critical part of dioxygen evolution in photosystem II is the O-O bond formation step. In order to reach an efficient mechanism, nature uses a unique oxygen-evolving complex (OEC) having four manganese and one calcium center. Even though the structure of the OEC has become much more clear during recent years, it has still been difficult to find a transition state (TS) for O-O bond formation with a sufficiently low barrier. However, about a year ago, a quite surprising type of TS was found. With the latest X-ray ligand assignment, the local barrier for this TS is only 5.1 kcal/mol. It can be described as an attack by an oxygen radical, held by a dangling manganese, on a bridging oxo ligand in the Mn3Ca cube. In the present short Article, energy diagrams describing the entire process of dioxygen formation will be presented. An important conclusion drawn from these diagrams is that the major features of dioxygen formation remain the same irrespective of which one of the experimentally suggested structures the diagram is built on. Compared to earlier presentations of the same type, a slightly different approach has been used for setting up the diagrams. Results from a recent experimental study of the pressure dependence of oxygen release have been used to define the final energy levels. The loss of energy in the electron transfer from Tyrz to P680 has also been incorporated into the diagrams. A good agreement with experimental observations is demonstrated.     

Novel numerical method for calculating initial flux of colloid particle adsorption through an energy barrier

Using variable substitution, we present a general method for the numerical solution of stiff, ordinary, linear, homogeneous differential equations characteristic of colloid particle adsorption/deposition over an energy barrier. For the example of the radial impinging jet system, we demonstrate the application of this method of calculating the colloid concentration profile and initial particle flux in the presence of repulsive electrostatic interactions between the particle and adsorption surface. We show that our method works well in systems with energy barriers up to the order of hundreds of kT, at which point the adsorption flux vanishes. The numerical results obtained with our method are in good agreement with the known limiting analytical approximations for the particle flux through an energy barrier and for a low Péclet number. The developed numerical code is very stable over a wide range of physical parameters, and its accuracy for the most challenging parameter sets is on the order of 10(-4). To achieve this stability, we have derived and employed a single formula for the van der Waals dispersion interaction, working at both a small and a large separation distance. We show that this formula converges to the known available analytical expressions for dispersion forces in the limit of small and large separation distance. We also demonstrate that the maximum deviations between our formula and the other equations appear in the intermediate range of the separation distance and do not exceed 10%.     

镍表面单原子台阶对甲烷解离过程影响的DFT研究

使用基于密度泛函理论（DFT）的DMol^3量子力学计算程序模块，采用Ni（211）周期性模型表达镍表面上的单原子台阶结构，计算出CHx（x=0～4）在Ni（211）模型不同活性位上的吸附能和空间构型，并使用LST／QST方法找到了台阶结构上CHx（x=1～4）的解离路径、过渡态和相应的能量数据．计算结果表明，金属表面台阶结构较平台结构更有利于CHx物种的吸附．台阶结构上存在能够降低CHx解离活化能的活性位．处于台阶结构上的特定位置时，CH4解离全过程的关键步骤-CH4和CH解离的活化能会大幅降低。     

超积累植物李氏禾叶细胞干粉对Cr(VI)的吸附特性研究

借助拟合吸附动力学和等温热力学方程, 研究了湿生超积累植物李氏禾叶细胞干粉对Cr(VI)的吸附性能. 考察了pH值、吸附时间等多种因素对吸附性能的影响; 利用扫描电镜(SEM), X射线能谱(EDS)对李氏禾干粉表面形貌及元素分布进行了表征. 结果表明, 该吸附是单分子吸附的伪二级动力学过程, 吸附过程包含两个步骤: Cr(VI)离子通过静电作用富集在干粉材料表面, 随后干粉表面存在的功能配位官能团会与Cr(VI)发生化学作用. 结合红外光谱图发现对铬起吸附作用的主要是含O, N功能原子的配位官能团, 并且不同功能原子与Cr(VI)的作用方式不同.