外电场作用下寡聚苯分子导线的性质

利用Hartree-Fock 方法在6-31G*水平上对聚苯分子进行了计算研究. 分别从几何构型、分子轨道空间分布和分子轨道能级三个方面讨论了外电场对寡聚苯分子导线的影响, 给出了分子导线的性质与外电场的关系. 进一步, 连接硫原子于聚苯分子的两端, 并共价结合在金电极上. 利用非平衡格林函数方法对其在0-2.0 V 偏压下电子输运特征进行了深入研究.     

Theoretical study of a conjugated aromatic molecular wire

In this study, an organic conjugated molecule, 4,4′-[ethane-1,2-diylidenedi(nitrilo)] dibenzenthiol designed and is proposed as a molecular wire. Structural and electronic responses of this aromatic molecular wire to the static electric field with intensities −1.6 × 10⁻² to +1.6 × 10⁻² a.u., are studied using the DFT-B3LYP/6-31G* level of theory. Natural bond orbital atomic charge analysis shows that the imposition of static external electric field induces polarization—localization of charge on the two ends of molecule, especially on considered terminal contact sulfur atoms. The frontier molecular orbitals (MOs) energy levels including the highest occupied MO (HOMO) and the lowest unoccupied MO (LUMO) and the HOMO–LUMO gap (HLG) values are modified by the static electric field as well. The electric dipole moment and polarizability of the proposed molecular wire under the studied electric field strengths are considerably increased. The current–voltage characteristic curve is estimated for the proposed molecular wire.     

Mono- and bichromatic electron dynamics: LiH, a test case

This paper describes an electron dynamics method where the time dependence of an external oscillating electric field is the perturbing part of the Hamiltonian. Application of the electric field induces charge movement inside the molecule and electronic transitions between the molecular orbitals. The test system is the neutral LiH molecule. The method is applied to wave functions calculated using the B3LYP (hybrid) density functional, with the STO-3G and the 6-31+G basis sets. The molecule undergoes full population inversion between the HOMO and the LUMO when the electric field is in resonance with the HOMO-LUMO energy gap. The magnitude of the electric field directly affects the rate at which electronic transitions occur and the rate at which charges move between lithium and hydrogen atoms. The method is used to model both monochromatic and bichromatic multiphoton effects in LiH. Monochromatic one-, two- and three-photon transitions occur between the HOMO, LUMO and two other virtual orbitals. There is evidence of both [1+2] direct and [1+1+1] stepwise multiphoton transitions. Bichromatically, two "laser" pulses are applied at different frequencies. Electronic transitions can be fine-tuned to occur via pre-specified pathways of virtual molecular orbitals.     

Aromaticity: an ab initio evaluation of the properly cyclic delocalization energy and the pi-delocalization energy distortivity of benzene

A complete active space self-consistent field (CASSCF) calculation of the pi system of a conjugated molecule enables one to define optimal valence pi and pi* molecular orbitals (MOs). One may define from them a set of atom-centered orthogonal pi orbitals, one per carbon atom, and the resulting upper multiplet is used to define the pi-electron delocalization energy. This quantity is confirmed to be slightly distortive, i.e., to prefer bond-alternated geometries. One may also define strongly localized bond MOs corresponding to a Kekule structure and then perturb the associated strongly localized single determinant under the effect of the delocalization between the bonds and of the electronic correlation. The third order of perturbation introduces the contribution of the cyclic circulation of the electrons around the benzene ring, i.e. the aromatic energy contribution. Its value is about 1.5 eV. It is antidistortive, but remains important under bond alternation. The cyclic correlation effects are of minor importance.     

Controlling Electrical Conductance through a π‐Conjugated Cruciform Molecule by Selective Anchoring to Gold Electrodes

Tuning charge transport at the single‐molecule level plays a crucial role in the construction of molecular electronic devices. Introduced herein is a promising and operationally simple approach to tune two distinct charge‐transport pathways through a cruciform molecule. Upon in situ cleavage of triisopropylsilyl groups, complete conversion from one junction type to another is achieved with a conductance increase by more than one order of magnitude, and it is consistent with predictions from ab initio transport calculations. Although molecules are well known to conduct through different orbitals (either HOMO or LUMO), the present study represents the first experimental realization of switching between HOMO‐ and LUMO‐dominated transport within the same molecule.     

Electronic structure of copper phthalocyanine: an experimental and theoretical study of occupied and unoccupied levels

An experimental and theoretical study of the electronic structure of copper phthalocyanine (CuPc) molecule is presented. We performed x-ray photoemission spectroscopy (XPS) and photoabsorption [x-ray absorption near-edge structure (XANES)] gas phase experiments and we compared the results with self-consistent field, density functional theory (DFT), and static-exchange theoretical calculations. In addition, ultraviolet photoelectron spectra (UPS) allowed disentangling several outer molecular orbitals. A detailed study of the two highest occupied orbitals (having a(1u) and b(1g) symmetries) is presented: the high energy resolution available for UPS measurements allowed resolving an extra feature assigned to vibrational stretching in the pyrrole rings. This observation, together with the computed DFT electron density distributions of the outer valence orbitals, suggests that the a(1u) orbital (the highest occupied molecular orbital) is mainly localized on the carbon atoms of pyrrole rings and it is doubly occupied, while the b(1g) orbital, singly occupied, is mainly localized on the Cu atom. Ab initio calculations of XPS and XANES spectra at carbon K edge of CuPc are also presented. The comparison between experiment and theory revealed that, in spite of being formally not equivalent, carbon atoms of the benzene rings experience a similar electronic environment. Carbon K-edge absorption spectra were interpreted in terms of different contributions coming from chemically shifted C 1s orbitals of the nonequivalent carbon atoms on the inner ring of the molecule formed by the sequence of CN bonds and on the benzene rings, respectively, and also in terms of different electronic distributions of the excited lowest unoccupied molecular orbital (LUMO) and LUMO+1. In particular, the degenerate LUMO appears to be mostly localized on the inner pyrrole ring.     

电场对(4, 0)Zigzag模型单壁碳纳米管的影响

The structural and electronic properties of a (4, 0) zigzag single-walled carbon nanotube (SWCNT) under parallel and transverse electric fields with strengths of 0-1.4×10~(-2) a.u. Were studied using the density functional theory (DFT) B3LYP/6-31G~* method. Results show that the properties of the SWCNT are dependent on the external electric field. The applied external electric field strongly affects the molecular dipole moments. The induced dipole moments increase linearly with increase in the electrical field intensities. This study shows that the application of parallel and transverse electric fields results in changes in the occupied and virtual molecular orbitals (Mos) but the energy gap between the highest occupied MO (HOMO) and the lowest unoccupied MO (LUMO) of this SWCNT is less sensitive to the electric field strength. The electronic spatial extent (ESE) and length of the SWCNT show small changes over the entire range of the applied electric field strengths. The natural bond orbital (NBO) electric charges on the atoms of the SWCNT show that increase in the external electric field strength increases the separation of the center of the positive and negative electric charges of the carbon nanotube.     

外电场下氮化铝分子结构和光谱研究

以6-311＋G(2DF)为基函数, 采用密度泛函B3P86的方法研究了外电场作用下氮化铝(AlN)基态分子的几何结构、HOMO能级、LUMO能级、能隙及谐振频率. 结果表明, 外电场的大小和方向对AlN分子基态的这些性质有明显影响. 在所加的电场范围内, 随着外电场的增大分子键长减小, 谐振频率增大, 总能量升高, 在F＝0.02 a.u.时能量达到最大, 为－297.4217 a.u., 此后继续增大电场强度, 系统总能量则开始降低; EH 和EL 随着电场的增加均逐渐增大, 在 F＝0.01 a.u.时, EH 和EL均取得最大值, 分别为－0.2776和－0.0828 a.u., 随着电场的继续增大, 能级EH和EL均逐渐减小, 而能隙在外电场增大的过程中始终处于减小趋势.     

Molecular binding at gold transport interfaces. III. Field dependence of electronic properties

The behavior of the electronic structure in a metal/molecular/metal junction as a function of the applied electric field is studied using density functional methods. Although the calculations reported here do not include the electrode bulk, or intermolecular interactions, and do not permit actual transport to occur, nevertheless they illuminate the charging, energy shift, polarization and orbital occupation changes in the molecular junction upon the application of a static electric field. Specifically, external electric fields generally induce polarization localization on the two cluster ends. The HOMO/LUMO gap usually decreases and, for large enough fields, energy levels can cross, which presages a change of electronic state and, if found in molecular electronic circuits, a change in transmission. The calculations also show changes in the geometry both of the molecule and the molecule/cluster interface upon application of the electric field. These effects should be anticipated in whole circuit studies.     

Dual conductance, negative differential resistance, and rectifying behavior in a molecular device modulated by side groups

We investigate the electronic transport properties for a molecular device model constructed by a phenylene ethynylene oligomer molecular with different side groups embedding in a carbon chain between two graphene electrodes. Using the first-principles method, the unusual dual conductance, negative differential resistance (NDR) behavior with large peak to valley ratio, and obvious rectifying performance are numerically observed in such proposed molecular device. The analysis of the molecular projected self-consistent Hamiltonian and the evolution of the frontier molecular orbitals (MOs) as well as transmission coefficients under various external voltage biases gives an inside view of the observed results, which suggests that the dual conductance behavior and rectifying performance are due to the asymmetry distribution of the frontier MOs as well as the corresponding coupling between the molecule and electrodes. But the NDR behavior comes from the conduction orbital being suppressed at certain bias. Interestingly, the conduction properties can be tuned by introducing side groups to the molecule and the rectification as well as the NDR behavior (peak to valley ratio) can be improved by adding different side groups in the device model.     

Is the dynamical polarization a significant part of the contribution of the triples to the correlation energy?

One may call dynamical polarization of doubly excited configurations the energy lowering of these configurations under the response of the other electrons to the so-created fluctuation of the electric field. This contribution of triply excited configurations may be identified and calculated through a computation that only requires a computation time proportional to the sixth power of the number of molecular orbitals (MOs), instead of the seventh power for the total contribution of the triples. Its amplitude depends on the choice of the MOs and becomes important when localized MOs are used.     

Localization of molecular orbitals on fragments

A non‐iterative algorithm for the localization of molecular orbitals (MOs) from complete active space self consistent field (CASSCF) and for single‐determinantal wave functions on predefined moieties is given. The localized fragment orbitals can be used to analyze chemical reactions between fragments and also the binding of fragments in the product molecule with a fragments‐in‐molecules approach by using a valence bond expansion of the CASSCF wave function. The algorithm is an example of the orthogonal Procrustes problem, which is a matrix optimization problem using the singular value decomposition. It is based on the similarity of the set of MOs for the moieties to the localized MOs of the molecule; the similarity is expressed by overlap matrices between the original fragment MOs and the localized MOs. For CASSCF wave functions, localization is done independently in the space of occupied orbitals and active orbitals, whereas, the space of virtual orbitals is mostly uninteresting. Localization of Hartree–Fock or Kohn–Sham density functional theory orbitals is not straightforward; rather, it needs careful consideration, because in this case some virtual orbitals are needed but the space of virtual orbitals depends on the basis sets used and causes considerable problems due to the diffuse character of most virtual orbitals. © 2012 Wiley Periodicals, Inc.     

强外电场作用下二甲基硅酮的分子结构和激发态

The ground states of dimethyl siloxane under different intense electric fields ranging from - 0. 04 to 0. 04 a. u. are optimized using density functional theory DFT / B3P86 at 6-311 ++ G（d,p）level. The excitation energies and oscillator strengths under the same intense applied electric fields are calculated employing the revised hybrid CIS-DFT method. The result shows that the electronic state,molecular geometry,total energy,dipole moment and excitation energy are strongly dependent on the field strength and behave asymmetry to the direction of the applied electric field. As the electric field changes from - 0. 04 to 0. 04 a. u. ,the bond length of Si-O increases whereas the bond length of Si-C decreases because of the charge transfer induced by the applied electric field. The dipole moment of the ground state decreases linearly with the applied field strength. However,the dipole moment of molecule changes from positive to negative as the inverse electric field increase to - 0. 03 a. u. Further increase of the inverse electric field results in an increase of the total energy of the molecule. The dependence of the calculated excitation energies on the applied electric field strength is fitting well to the relationship proposed by Grozema. The excitation energies of the first five excited states of dimethyl siloxane decrease as the applied electric filed increases because the energy gap between the HOMO and LUMO become close with the field,which shows that the molecule is easy to be excited under electric field and hence can be easily dissociated.     

Al-C60-Al分子结电子输运特性的第一性原理计算

利用基于密度泛函理论的格林函数方法, 计算了Al-C60-Al分子结的电子输运特性. 考虑了C60分子在铝电极表面的原子结构弛豫, 计算结果表明共振传导是Al-C60-Al分子结电子输运的主要特征, 在费米能级附近的电导约为1.14G0 (G0=2e2/h). 投影态密度(PDOS)分析表明, Al-C60-Al分子结的电子输运主要通过C60分子的最低空分子轨道(LUMO)和次低空分子轨道(LUMO+1)进行. 讨论了C60分子和铝电极之间距离的变化对其电子输运特性的影响.     

Determining the magnitude and direction of photoinduced ligand field switching in photochromic metal-organic complexes: molybdenum-tetracarbonyl spirooxazine complexes

The ability to optically switch or tune the intrinsic properties of transition metals (e.g., redox potentials, emission/absorption energies, and spin states) with photochromic metal-ligand complexes is an important strategy for developing "smart" materials. We have described a methodology for using metal-carbonyl complexes as spectroscopic probes of ligand field changes associated with light-induced isomerization of photochromic ligands. Changes in ligand field between the ring-closed spirooxazine (SO) and ring-opened photomerocyanine (PMC) forms of photochromic azahomoadamantyl and indolyl phenanthroline-spirooxazine ligands are demonstrated through FT-IR, (13)C NMR, and computational studies of their molybdenum-tetracarbonyl complexes. The frontier molecular orbitals (MOs) of the SO and PMC forms differ considerably in both electron density distributions and energies. Of the multiple π* MOs in the SO and PMC forms of the ligands, the LUMO+1, a pseudo-b(1)-symmetry phenanthroline-based MO, mixes primarily with the Mo(CO)(4) fragment and provides the major pathway for Mo(d)→phen(π*) backbonding. The LUMO+1 is found to be 0.2-0.3 eV lower in energy in the SO form relative to the PMC form, suggesting that the SO form is a better π-acceptor. Light-induced isomerization of the photochromic ligands was therefore found to lead to changes in the energies of their frontier MOs, which in turn leads to changes in π-acceptor ability and ligand field strength. Ligand field changes associated with photoisomerizable ligands allow tuning of excited-state and ground-state energies that dictate energy/electron transfer, optical/electrical properties, and spin states of a metal center upon photoisomerization, positioning photochromic ligand-metal complexes as promising targets for smart materials.     

Effect of External Electric Field on H‐Bonding and π‐Stacking Interactions in Guanine Aggregates

The structure and electronic properties of guanine oligomers and π stacks of guanine quartets (G‐quartets) with circulene are investigated under an external field through first‐principles calculations. An electric field induces nonplanarity in the guanine aggregates and also leads to an increase in the H‐bond distances. The calculations reveal that the binding energy of the circulenes with G‐quartets increases on application of an electric field along the stacking direction. The HOMO–LUMO gap decreases substantially under the influence of an external field. The contribution of a simple dipole–dipole interaction to the stability of the stacked system is also analyzed. The electric field along the perpendicular axis increases the dipole moments of the guanine dimer, trimer, and quartet. Such an increase in the dipole moment facilitates stacking with circulenes. The stability of G‐quartet–circulene π stacks depends on the phase of the dipole moment (in‐phase or out‐of‐phase) induced by an external electric field. The stability of stacks of bowl‐shaped circulenes with G‐quartets depends on the direction of the applied field.     

Theoretical Investigation of the Protonation Mechanism of Doped Polyaniline

The theoretical calculation of polyaniline tetramers were performed in implicit water solvent medium using the polarizable continuum model with density functional theory. In order to explore the protonation mechanism of polyaniline, the geometry characteristics, charge distribution, frontier molecular orbitals (MOs) and stability of emeraldine base and emeraldine salts in tetramer were investigated by B3LYP/6-31G+(d,p), and the significant increase mechanism of the electrical conductivity of polyaniline upon protonation was researched in detail. It was shown that optimized molecular geometry by protonation doping suggested a tendency towards bipolaron delocalization and a greater π-conjugation proved by bond length alternation and the torsional angles. Furthermore, the NBO of ES3 was distributed equably and should be conducive to the electrical conductivity, the frontier MOs were effectively established, and an electronic transition from HOMO to LUMO+1 is turned out to be a ππ* transition finally. In addition, compared with the computed energies of different emeraldine salt configurations, the bipolaronic lattice was taken for the most stable structure.     

A simple extension of the external magnasco-perico localization procedure to the virtual MO-Space

The external localization procedure of Magnasco and Perico is extended to the unoccupied molecular orbitals of the Fock-operator. The formal correspondence between bonding orbitals and localized antibonding MOs is demonstrated. Localized occupied and virtual one-electron functions are calculated within a semiempirical INDO-Hamiltonian and are analyzed; the externally localized occupied MOs are compared with energy localized orbitals computed by the Edmiston and Ruedenberg procedure. Various applications of the fully localized (occupied and virtual) MO set are discussed.     

Co-adsorption of CO molecules at the open ends of MgO nanotubes

Equilibrium geometries, stabilities, and electronic properties of the adsorption of a CO molecule along with two or three CO co-adsorptions at the open ends of MgO nanotubes have been investigated through density functional calculations. It was found that the interaction of CO molecule with ends of the tube is much stronger than that of with its exterior surface. It was also found that adsorption of the second CO molecule at the end of the tube is independent of the first adsorbed CO molecule, while the prior adsorption process impacts the third adsorption. This phenomenon was described based on the frontier molecular orbital analysis, showing that the third CO molecule has to interact with high energetic unoccupied orbitals instead of the LUMO. Furthermore, it was revealed that similar to CO adsorption on the exterior surface of the tube, the adsorption at its open ends is electronically harmless.