Cation exchange in lipophilic G-quadruplexes: not all ion binding sites are equal

Lipophilic guanosine derivatives that form G-quadruplexes are promising building blocks for ionophores and ion channels. Herein, cation exchange between solvated cations (K+ and NH4+) and bound cations in the G-quadruplex [G1]16.4Na+.4DNP- was studied by electrospray ionization mass spectrometry and solution 1H, 15N NMR spectroscopy. The ESI-MS and 1H NMR data provided evidence for the formation of mixed-cationic Na+, K+ G-quadruplexes. The use of 15NH4+ cations in NMR titrations, along with 15N-filtered 1H NMR and selective NOE experiments, identified two mixed-cationic intermediates in the cation exchange pathway from [G1]16.4Na+.4DNP- to [G1]16.4NH4+.4DNP-. The central Na+, bound between the two symmetry-related G8-Na+ octamers, exchanges with either K+ or NH4+ before the two outer Na+ ions situated within the C4 symmetric G8 octamers. A structural rationale, based on differences in the cations' octahedral coordination geometries, is proposed to explain the differences in site exchange for these lipophilic G-quadruplexes. Large cations such as Cs+ can be exchanged into the central cation binding site that holds the two symmetry-related C4 symmetric G8 octamer units together. The potential relevance of these findings to both supramolecular chemistry and DNA G-quadruplex structure are discussed.     

Cellular cation transport studied by 6/7Li and 23Na NMR in a porous Mo132 Keplerate type nano-capsule as model system

Li+ ions can interplay with other cations intrinsically present in the intra- and extra-cellular space (i.e. Na+, K+, Mg2+ and Ca2+) have therapeutic effects (e.g. in the treatment of bipolar disorder) or toxic effects (at higher doses), likely because Li+ interferes with the intra-/extra-cellular concentration gradients of the mentioned physiologically relevant cations. The cellular transmembrane transport can be modelled by molybdenum-oxide-based Keplerates, i.e. nano-sized porous capsules containing 132 Mo centres, monitored through 6/7Li as well as 23Na NMR spectroscopy. The effects on the transport of Li+ cations through the 'ion channels' of these model cells, caused by variations in water amount, temperature, and by the addition of organic cationic 'plugs' and the shift reagent [Dy(PPP)2](7-) are reported. In the investigated solvent systems, water acts as a transport mediator for Li+. Likewise, the counter-transport (Li+/Na+, Li+/K+, Li+/Cs+ and Li+/Ca2+) has been investigated by 7Li NMR and, in the case of Li+/Na+ exchange, by 23Na NMR, and it has been shown that most (in the case of Na+ and K+, all (Ca2+) or almost none (Cs+) of the Li cations is extruded from the internal sites of the artificial cell to the extra-cellular medium, while Na+, K+ and Ca2+ are partially incorporated.     

Multiple charging of poly(propylene glycol) by binary mixtures of cations in electrospray

Single, double and triple charging of poly(propylene glycol) (PPG) (Mn = 1900 g/mol) in the presence of binary mixtures of cations (Li+, Na+, K+, Cs+, and NH4+) under electrospray ionization (ESI) conditions were investigated. For these studies, sodium ion was selected as the reference cation, and the resulting ion-intensities were evaluated as a function of the [Na+]/[C+] ratio (where C+ is the other cation, i.e., Li+, K+, Cs+ and NH4+). A linear relationship was found between INa+/IC+)and [Na+]/[C+] (INa+ and IC+ stand for the intensity of the singly charged PPG molecules cationized with Na+ and C+ ions, respectively). The slope of the INa+/IC+--[Na+]/[C+] plot (alpha) indicates the binding selectivity of Na+ ions to PPG chains with respect to cation C+. In the case of the doubly charged PPG chains, the INaNa2+/INaC2+ and INaC2+/ICC2+ versus [Na+]/[C+] ratio also yield straight lines with slopes of approximately alpha/2 and 2alpha, respectively (INaNa2+, INaC2+ and ICC2+ are the intensity of the doubly charged PPG chains cationized with two Na+ ions, Na+ and C+ ions, and two C+ ions, respectively). Similarly, linear dependences with the [Na+]/[C+] ratio for the corresponding intensity ratios of the triply charged PPG were found. Based on the value of alpha, the selectivity of the cations was found to increase in the order of Li+ < Cs+ approximately Na+ < K+ approximately NH4+. The observed relative ion intensities are interpreted on the basis of the solution state equilibrium between PPG and the cations. In addition, the investigations showed that the abundances of the doubly and triply charged PPG-containing mixed cations can be optimized in a simple way using the value of alpha.     

Novel fluorogenic calix[4]arene-bis(crown-6-ether) for selective recognition of thallium(I)

A new fluorogenic, dansyl group-containing derivative of 1,3-alternate calix[4]arene-bis(crown-6-ether) provides optical recognition of Tl+ with selectivity over many other metal cations, including Na+, K+, Ca2+, Ag+, Hg2+ and Pb2+, and embodies the first example of a calixarene-based fluorescent Tl+-chemosensor.     

Simultaneous separation of nine metal ions and ammonium with nonaqueous capillary electrophoresis

A simple and fast method for simultaneous separation of nine metal cations Ni2+, Cu2+, Co2+, Zn2+ Cd2+, K+, Na+, Mg2+ and Ca2+, and NH4+ in methanol is reported. The optimization for separation these 10 cations was achieved by using 0.5% acetic acid and 10 mM imidazole as electrolyte. The effects of water and ionic strength in the sample are discussed. The sensitive detection of transition metal ions was accomplished at 191 nm. The optimized method demonstrated high efficiency and good reproducibility, and was applied successfully to the qualitative and quantitative determination of transition metal ions in water samples, chemical reagents, oral zinc gluconate solution and human plasma.     

Synthesis and luminescence properties of Ag2S and PbS clusters in zeolite A

Zeolite A provides a suitable environment to host Ag2S and PbS clusters, so that spectroscopic investigations on very small particles are possible. The Ag2S monomer is colorless and shows photoluminescence at 490 nm with a lifetime of 300 micros, while the absorption and luminescence of Ag4S2 and larger clusters are red-shifted. The properties of these Ag2S/zeolite A materials depend on the co-cations. Results for Li+, Na+, K+, Rb+, Cs+, Mg2+, Ca2+, and Sr2+ are reported. Excitation energy transfer between Ag2S and Ag4S2 has been studied in materials containing Ca2+ co-cations. PbS particles can be prepared by the same method as Ag2S in the cavities of zeolite A. The PbS monomers obtained are yellow and show photoluminescence at 570 nm, with a lifetime of 700 ns.     

毛细管区带电泳分析水中阳离子

选用一种新的缓冲液体系，采用毛细管区带电泳法，同时分离水中铵奶离子及碱金属、碱土金属和过渡金属等１２种分属不同类型的阳离子，并对电泳分离用金属阳离子弱络合剂、电解质ＰＨ值作了研究。方法用于环境水样分析，获得了满意效果。     

Modeling metal cation-phosphate interactions in nucleic acids in the gas phase via alkali metal cation-triethyl phosphate complexes

Threshold collision-induced dissociation techniques are employed to determine the bond dissociation energies (BDEs) of complexes of alkali metal cations, Na+, K+, Rb+, and Cs+, to triethyl phosphate (TEP). The primary and lowest energy dissociation pathway in all cases is the endothermic loss of the neutral TEP ligand. Theoretical electronic structure calculations at the B3LYP/6-311+G(2d,2p)//B3LYP/6-31G* level of theory are used to determine the structures, molecular parameters, and theoretical estimates for the BDEs of these complexes. For the complexes to Rb+ and Cs+, theoretical calculations were performed using hybrid basis sets in which the effective core potentials and valence basis sets of Hay and Wadt were used to describe the alkali metal cation, while the standard basis sets were used for all other atoms. The agreement between theory and experiment is excellent for the complexes to Na+ and K+ and is somewhat less satisfactory for the complexes to the heavier alkali metal cations, Rb+ and Cs+, where effective core potentials were used to describe the cation. The trends in the binding energies are examined. The binding of alkali metal cations to triethyl phosphate is compared with that to trimethylphosphate.     

Amperometric detection studies of Nafion/indium hexacyanoferrate film for the determination of electroinactive cations in ion chromatography

An amperometric detector based on the chemical modification of Nafion and indium (III) hexacyanoferrate (II, III) thin film (Nafion/In-CN-Fe) onto a glassy carbon (GC) electrode, was first successfully used for the determination of electroinactive cations (Li+, Na+, K+, Rb+, Cs+, NH4+) in single column ion chromatography (IC). A set of well-defined peaks of electroinactive cations was obtained. The detection limits of the cations are 8.9 x 10(-6) mol/L for Li+, 2.3 x 10(-6) mol/L for Na+, 5.2 x 10(-6) mol/L for K+, 4.8 x 10(-6) mol/L for Rb+, 4.0 x 10(-6) mol/L for Cs+ and 5.3 x 10(-6) mol/L for NH4+ at a single-to-noise ratio of 3. The proposed method was quick, sensitive and simple. The cations in rainwater and mineral water were successfully analyzed by this method.     

Use of the Second Derivative of TG Curves for Investigation of the Exchanged Interlayer Cation in Montmorillonite

Various cation-exchanged montmorillonites (Li+, Na+, Ba2+, Mg2+, Ca2+, Mn2+, Co2+, Cu2+, Ag+, Cd2+, Hg2+, Al3+, Pb2+ and NH4+) were prepared from calcium montmorillonite and their properties were studied by means of X-ray diffraction and thermal analysis. The two methods give information on the cation exchange in the interlayer space only. X-ray diffraction studies at room temperature are mainly suitable for estimation of the exchange of cations of different valencies. At 500°C, when the structure is completely collapsed, the d value of montmorillonite depends on the non-hydrated ionic radius of the interlayer cation, but the measurement interval is limited for fine interpretation. The thermoanalytical method is suitable for a better distinction of different exchangeable cations of higher hydration energy on the basis of the DTG or DDTG curve. This revised version was published online in July 2006 with corrections to the Cover Date.     

Infrared spectroscopy of arginine cation complexes: direct observation of gas-phase zwitterions

The structures of cationized arginine complexes [Arg + M]+, (M = H, Li, Na, K, Rb, Cs, and Ag) and protonated arginine methyl ester [ArgOMe + H]+ have been investigated in the gas phase using calculations and infrared multiple-photon dissociation spectroscopy between 800 and 1900 cm-1 in a Fourier transform ion cyclotron resonance mass spectrometer. The structure of arginine in these complexes depends on the identity of the cation, adopting either a zwitterionic form (in salt-bridge complexes) or a non-zwitterionic form (in charge-solvated complexes). A diagnostic band above 1700 cm-1, assigned to the carbonyl stretch, is observed for [ArgOMe + H]+ and [Arg + M]+, (M = H, Li, and Ag), clearly indicating that Arg in these complexes is non-zwitterionic. In contrast, for the larger alkali-metal cations (K+, Rb+, and Cs+) the measured IR-action spectra indicate that arginine is a zwitterion in these complexes. The measured spectrum for [Arg + Na]+ indicates that it exists predominantly as a salt bridge with zwitterionic Arg; however, a small contribution from a second conformer (most likely a charge-solvated conformer) is also observed. While the silver cation lies between Li+ and Na+ in metal-ligand bond distance, it binds as strongly or even more strongly to oxygen-containing and nitrogen-containing ligands than the smaller Li+. The measured IR-action spectrum of [Arg + Ag]+ clearly indicates only the existence of non-zwitterionic Arg, demonstrating the importance of binding energy in conformational selection. The conformational landscapes of the Arg-cation species have been extensively investigated using a combination of conformational searching and electronic structure theory calculations [MP2/6-311++G(2d,2p)//B3LYP/6-31+G(d,p)]. Computed conformations indicate that Ag+ is di-coordinated to Arg, with the Ag+ chelated by both the N-terminal nitrogen and Neta of the side chain but lacks the strong M+-carbonyl oxygen interaction that is present in the tri-coordinate Li+ and Na+ charge-solvation complexes. Experiment and theory show good agreement; for each ion species investigated, the global-minimum conformer provides a very good match to the measured IR-action spectrum.     

冠醚聚合物的研究 Ⅱ.以聚硫醚为主链的硫杂冠醚聚合物的合成及其络合性能

本文报道了一种合成硫杂冠醚聚合物的新方法。以聚(2′-氯乙基-2,3-环硫丙基醚)为预聚物与二巯基化合物通过大分子反应直接环化,一步法合成了四种以聚硫醚为主链的新型硫杂冠醚聚合物(PD1-PD4)。并测定了它们对Ag~+、Au~(3+)、Pd~(2+)、Pt~(4+)、Cu~(2+)、Hg~(2+)、Zn~(2+)、Cd~(2+)、Pb~(2+)、Mg~(2+)、K~+、Ns~+等金属离子的络合性能。结果表明:它们除不络合K~+、Na~+、Mg~(2+)、Pb~(2+)外,对其它八种离子有不同程度的络合,其中对Ag~+、Au~(3+)、Pd~(2+)等贵金属离子的络合容量较高。     

Factors governing the metal coordination number in isolated group IA and IIA metal hydrates

Many of the group IA and IIA metal ions, such as Na+, K+, Mg2+, and Ca2+, play crucial roles in biological functions. Previous theoretical studies generally focus on the number of water molecules bound to a particular (as opposed to all) alkali or alkaline earth cations and could not establish a single preferred CN for the heavier alkali and alkaline earth ion-water complexes. Crystal structures of hydrated Na+, K+, and Rb+ also cannot establish the preferred number of inner-shell water molecules bound to these cations. Consequently, it is unclear if the gas-phase CNs of group IA metal hydrates increase with increasing ion size, as observed for the group IIA series from the Cambridge Structural Database, and if the same factors govern the gas-phase CNs of both group IA and IIA ion-water complexes. Thus, in this work, we determine the number of water molecules directly bound to the series of alkali (Li+, Na+, K+, and Rb+) and alkaline earth (Be2+, Mg2+, Ca2+, Sr2+, and Ba2+) metal ions in the gas phase by computing the free energy for forming an isolated metal-aqua complex as a function of the number of water molecules at 298 K. The preferred gas-phase CNs of group IA hydrates appear insensitive to the ion size; they are all 4, except for Rb+, where a CN of 6 seems as likely. In contrast, the preferred gas-phase CNs of the group IIA dications increase with increasing ion size; they are 4 for Be2+, 6 for Mg2+ and Ca2+, and 7 for Sr2+ and Ba2+. An entropic penalty disfavors a gas-phase CN greater than 4 for group IA hydrates, but it does not dictate the gas-phase CNs of group IIA hydrates. Instead, interactions between the metal ion and first-shell water molecules and between first-shell and second-shell water molecules govern the preferred gas-phase CNs of the group IIA metal hydrates.     

碱金属和碱土金属离子在反相高效液相色谱柱上的保留机理

发现以酒石酸和吡啶二甲酸等羧酸水溶液作淋洗剂时，钠，铵，钾，镁和钙等碱金属及碱土金属离子在ＯＤＳ反相高效液相色谱柱上有明显的保留，而且相互之间能达到一定程度的分离。单独用分配或疏水作用等反相高效液相色谱的保留机理难以解释其保留行为。为此，作者提出了动态包固定相机理，即认为羧酸根阴离子因其疏水性在ＯＤＳ固定相有保留，在固定相表面形成具有羧酸基阳离子交换树脂功能的动态包覆固定相。     

Gas-phase conformations of cationized poly(styrene) oligomers

The gas-phase conformations of poly(styrene) oligomers cationized by Li+, Na+, Cu+, and Ag+ (M+ PSn) were examined using ion mobility experiments and molecular mechanics/ dynamics calculations. M+PSn ions were formed by MALDI and their ion-He collision cross-sections were measured by ion mobility methods. The experimental collision cross-sections of each M+PS n-mer were similar for all four metal cations and increased linearly with n. Molecular modeling of selected M+ PS oligomers cationized by Li+ and Na+ yielded quasi-linear structures with the metal cation sandwiched between two phenyl groups. The relative energies of the structures were approximately 2-3 kcal/mol more stable when the metal cation was sandwiched near the middle of the oligomer chain than when it was near the ends of the oligomer. The cross-sections of these theoretical structures agree well with the experimental values with deviations typically around 1-2%. The calculations also show that the metal cation tends to align the phenyl groups on the same side of the -CH2-CH- backbone. Calculations on neutral poly(styrene), on the other hand, showed structures in which the phenyl groups were more randomly positioned about the oligomer backbone. The conformations and metal-oligomer binding energies of M+PS are also used to help explain CID product distributions and fragmentation mechanisms of cationized PS oligomers. etry     

Os(bipy)(CN)4]2- and its relatives as components of polynuclear assemblies: structural and photophysical properties

A series of diimine-tetracyanoosmate anions [Os(diimine)(CN)4]2- [diimine=2,2'-bipyridine (bipy), 2,2'-bipyrimidine (bpym), 1,10-phenanthroline (phen), and 4,4'-tBu2-2,2'-bipyridine (tBu2bpy)] were prepared and isolated as their Na+ salts (water soluble) or PPN+ salts (soluble in organic solvents). Several examples were crystallographically characterized; the Na+ salts form a range of 1D, 2D, or 3D infinite coordination polymers via coordination of the cyanide groups to Na+ cations in either an end-on or a side-on manner. The [Os(diimine)(CN)4]2- anions are solvatochromic, showing three MLCT absorptions, which are considerably blue-shifted in water compared to organic solvents, in the same way as is well-known for the analogous [Ru(diimine)(CN)4]2- anions. Luminescence in the red region of the spectrum is very weak but (following the expected solvatochromic behavior) is higher energy and more intense in water. However, by exploiting the effect of metallochromism (ref 4), the emission from [Os(tBu2bpy)(CN)4]2- in MeCN can be very substantially boosted in energy, intensity, and lifetime in the presence of Lewis-acidic metal cations (Na+, Ba2+, Zn2+), which, in a relatively noncompetitive solvent, coordinate to the cyanide groups of [Os(tBu2bpy)(CN)4]2-. This has an effect similar in principle to hydrogen bonding of the cyanides to delta+ protons of water, but very much stronger, such that in the presence of Zn2+ ions in MeCN the 1MLCT and 3MLCT absorptions are blue-shifted by ca. 7000 cm(-1), and the luminescence moves from 970 nm (vanishingly weak) to 610 nm with a lifetime of 120 ns (dominant component). Thus, the binding of metal cations to the cyanides provides a mechanism to incorporate [Os(diimine)(CN)4]2- complexes into polynuclear assemblies and simultaneously increases their 3MLCT energy and lifetime to an extent that makes them comparable to much-stronger luminophores such as Ru(II)-polypyridines.     

A density functional theory study of molecular and dissociative adsorption of H2 on active sites in mordenite

Adsorption and chemisorption of H2 in mordenite is studied using ab initio density functional theory (DFT) calculations. The geometries of the adsorption complex, the adsorption energies, stretching frequencies, and the capacity to dissociate the adsorbed molecule are compared for different active sites. The active centers include a Br?nsted acid site, a three-coordinated surface Al site, and Lewis sites formed by extraframework cations: Na+, Cu+, Ag+, Zn2+, Cu2+, Ga3+, and Al3+. Adsorption properties of cations are compared for a location of the cation in the five-membered ring. This location differs from the location in the six-membered ring observed for hydrated cations. The five-membered ring, however, represents a stable location of the bare cation. In this position any cation exhibits higher reactivity compared with the location in the six-membered ring and is well accessible by molecules adsorbed in the main channel of the zeolite. Calculated adsorption energies range from 4 to 87 kJ/mol, depending on electronegativity and ionic radius of the cation and the stability of the cation-zeolite complex. The largest adsorption energy is observed for Cu+ and the lowest for Al3+ integrated into the interstitial site of the zeolite framework. A linear dependence is observed between the stretching frequency and the bond length of the adsorbed H2 molecule. The capacity of the metal-exchanged zeolite to dissociate the H2 molecule does not correlate with the adsorption energy. Dissociation is not possible on single Cu+ cation. The best performance is observed for the Ga3+, Zn2+, and Al3+ extraframework cations, in good agreement with experimental data.     

Effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water coordination on the structure of glycine and zwitterionic glycine

Interactions between metal ions and amino acids are common both in solution and in the gas phase. Here, the effect of metal ions and water on the structure of glycine is examined. The effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water on structures of Gly.Mn+(H2O)m and GlyZwitt.Mn+(H2O)m (m = 0, 2, 5) complexes have been determined theoretically by employing the hybrid B3LYP exchange-correlation functional and using extended basis sets. Selected calculations were carried out also by means of CBS-QB3 model chemistry. The interaction enthalpies, entropies, and Gibbs energies of eight complexes Gly.Mn+ (Mn+ = Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) were determined at the B3LYP density functional level of theory. The computed Gibbs energies DeltaG degrees are negative and span a rather broad energy interval (from -90 to -1100 kJ mol(-1)), meaning that the ions studied form strong complexes. The largest interaction Gibbs energy (-1076 kJ mol(-1)) was computed for the NiGly2+ complex. Calculations of the molecular structure and relative stability of the Gly.Mn+(H2O)m and GlyZwitt.Mn+(H2O)m (Mn+ = Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+; m = 0, 2, and 5) systems indicate that in the complexes with monovalent metal cations the most stable species are the NO coordinated metal cations in non-zwitterionic glycine. Divalent cations Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+ prefer coordination via the OO bifurcated bonds of the zwitterionic glycine. Stepwise addition of two and five water molecules leads to considerable changes in the relative stability of the hydrated species. Addition of two water molecules at the metal ion in both Gly.Mn+ and GlyZwitt.Mn+ complexes reduces the relative stability of metallic complexes of glycine. For Mn+ = Li+ or Na+, the addition of five water molecules does not change the relative order of stability. In the Gly.K+ complex, the solvation shell of water molecules around K+ ion has, because of the larger size of the potassium cation, a different structure with a reduced number of hydrogen-bonded contacts. This results in a net preference (by 10.3 kJ mol(-1)) of the GlyZwitt.K+H2O5 system. Addition of five water molecules to the glycine complexes containing divalent cations Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+ results in a net preference for non-zwitterionic glycine species. The computed relative Gibbs energies are quite high (-10 to -38 kJ mol(-1)), and the NO coordination is preferred in the Gly.Mn+(H2O)5 (Mn+ = Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) complexes over the OO coordination.     

Vibrational study of the salicylate interaction with metallic ions and surfaces

Infrared and Raman spectroscopy are used in this work to study the metallic complexes of salicylic acid with silver and copper, comparing the interaction between salicylate and the cations (Ag+ and Cu2+) in the metal complexes with the SERS spectra when adsorbed on colloidal metal surfaces of the same metals. The salicylate complexes with the above metals were compared to those of Na+, Fe3+ and Al3+ cations. A different interaction mechanism is deduced for salicylate in the metal complex and when adsorbed on the metal surface.     

磷酸二甲酯阴离子(DMP~-)与一价、二价金属离子 相互作用的理论研究

在B3LYP、HF和MP2水平上运用全电子从头算(AE)和相对论有效实势(RECP)及6-311+G**和LanL2DZ基组计算Ⅰa、Ⅰb、Ⅱa和Ⅱb族金属离子与磷酸二甲酯阴离子(DMP-)的相互作用。 RECP用于除Li+、Be2+外所有的金属离子。 对Na+、K+、Cu+、Mg2+、Ca2+、Zn2+用AE和RECP 2种方法处理。 结果表明:RECP能可靠地用于重金属离子络合物; 二价金属离子络合物(DMP-—M2+)比一价金属离子络合物 (DMP-—M+)稳定;二价金属离子(M2+)可能比一价金属离子(M+)更易使多核苷酸折叠。