Femtosecond spectroscopic study of the solvation of amphiphilic molecules by water

We use polarization-resolved mid-infrared pump-probe spectroscopy to study the aqueous solvation of proline and N-methylacetamide. These molecules serve as models to study the solvation of proteins. We monitor the orientational dynamics of partly deuterated water molecules (HDO) that are present at a low concentration in the water. We find that the OD vibration of HDO relaxes via an intermediate level, that is characterized by a hydrogen-bond that is stronger than in the ground state. With increasing concentration the lifetime of the excited state increases from 1.8 ps to 2.4 ps and the lifetime of the intermediate level from 0.6 ps to 1.0 ps. Regarding the orientational dynamics we observe biexponential behavior, which finds its origin in the presence of two classes of water molecules. There is a fraction of water molecules that has bulk-like orientational dynamics (τ_rot = 2.5 ps) and a fraction of immobilized water molecules (τ_rot > 10 ps). The relative abundance of the two fractions is determined by the nature and concentration of the solute. We find that the hydrophobic solute groups are responsible for the immobilization of water molecules. Every methyl group causes the immobilization of approximately 4 water OH groups. The hydrophilic solute groups, on the other hand, do not hinder the reorientation and the water molecules solvating them reorient with the same rate as in the bulk liquid.     

Effect of temperature and concentration on the structure of N-methylacetamide-water complexes: Near-infrared spectroscopic study

Generalized two-dimensional (2D) FT-NIR correlation spectroscopy and chemometric methods have been used to study temperature-dependent spectral changes in pure N-methylacetamide (NMA) and NMA-water mixtures. We also examined the effect of varying water content on the structure of the mixture. It has been found that the extent of self-association of NMA in CCl4 is very high; the association occurs even at concentration of 0.001 M. In the pure liquid NMA, the population of the monomers is negligible and the structure is dominated by the linear associates. An increase in temperature reduces the number of hydrogen bonds, but in contrast to alcohols their strength remains nearly the same. This reflects a difference in the mechanism of thermal breaking of the associates of NMA and alcohols. The present results reveal that the interaction between NMA and water in the NMA-rich region (X(H2O) < 0.1) does not have a significant effect on the intrinsic structure of NMA. The structure of NMA is dominant, and the molecules of water do not form separate clusters but are dispersed and incorporated into the structure of NMA. We did not observe the presence of the free OH groups in the mixture. This led to the suggestion that each molecule of water forms two hydrogen bonds to two different molecules of NMA. An analysis of the asynchronous spectra reveals that most of the peaks observed in the asynchronous spectra, constructed from the temperature-dependent data, simply result from the frequency shift. This assumption is supported by the simulation studies.     

Responsiveness of the first combination band of water to the state in organic and polymeric medium

We studied the influence of intermolecular interactions on the first combination band between the OH-stretching and -deformation vibrations of the water that is dissolved in organic and polymeric materials. The water has two types. The first type occurs in the matrix in which water-interactive functional groups are densely distributed. The water is symmetrically hydrogen-bonded through each OH to two functional groups and shows one clear combination band, of which the frequency depends on the strength of the hydrogen bond. The second type occurs in the matrix in which the functional groups are rarely distributed. One OH of this water is hydrogen-bonded to the functional group but the other OH is free. The water shows two combination bands, of which one is sharp and strong at about 5300 cm-1 and the other is weaker and broader, the frequency changing in the 5200-5100 cm-1 range. Thus, the dissolved water sensitively responds to the nature of a water-interactive functional group and its distribution density in a matrix, and shows the first combination band that is characteristic of these factors.     

拉曼光谱研究CaCl2和MgCl2对水结构的影响

测试了CaCl2、MgCl2溶液(浓度小于1.0 mol•L-1)的OH伸缩振动区域的拉曼光谱.对所得到的拉曼光谱进行了计算机去卷积处理,并由此计算了不同溶液中水的四面体结构的百分数.研究表明,CaCl2、MgCl2对水中四面体结构有破坏作用，且CaCl2的破坏作用比MgCl2大.与17O核磁共振结果对比与分析,认为CaCl2、MgCl2虽然破坏水中的四面体结构,但通过促进含氢键数少的水分子形成氢键,故从总体上促进水的缔合结构.     

Tapes of water hexamer clusters in the interlayer space of a 2D MOF: Structural, spectroscopic and computational insight of the confined water

The synthesis, crystal structure and characterization of [Er₂(C₄H₄O₄)₃(H₂O)₄]·6H₂O, with particular emphasis on the structural details and the vibrational behavior of the highly organized sub-net of water are reported. X-ray structural analysis reveals that the hybrid framework, which can be classified as belonging to the I⁰O² type, acts as a host of an infinite tape of six-membered water rings with distorted chair conformation. The water network extends between the hybrid layers helping the close packing and the stabilization of the structure through H-bond interactions, with further development of the supramolecular tridimensional structure. The self-assembly of the hydration water molecules is conditioned by the hybrid host, forcing them to adopt a less stable conformation when compared with hexagonal ice. The vibrational spectra of partially and completely dehydrated samples as well as of partially isotopic diluted ones have been obtained and analyzed. In order to guide the assignment of the vibrational spectra a theoretical calculation was performed at the B3LYP/6-31G^∗∗ level for a model consisting of three water clusters.     

Density and temperature effect on hydrogen-bonded clusters in water - MD simulation study

Molecular dynamics NVE simulations have been performed for five thermodynamic states of water including ambient, sub-and supercritical conditions. Clustering of molecules via hydrogen bonding interaction has been studied with respect to the increasing temperature and decreasing density to examine the relationship between the extent of hydrogen bonding and macroscopic properties. Calculations confirmed decrease of the average number of H-bonds per molecule and of cluster-size with increasing temperature and decreasing density. In the sub-and supercritical region studied, linear correlations between several physical quantities (density, viscosity, static dielectric constant) and the total engagement of molecules in clusters of size k > 4, P _k>4, have been found. In that region there was a linear relationship between P _k>4 and the average number of H-bonds per water molecule. The structural heterogeneity resulting from hydrogen bonding interactions in low-density supercritical water has been also discussed.      

Observing the water molecule in macromolecules using infrared spectrometry: structure of the hydrogen bond network and hydration mechanism

The power and precision of IR spectrometry, or IR quantitative spectroscopy, to observe water molecules embedded in macromolecules, is illustrated, taking as examples the determination of the structures of the hydrogen-bond network of a dried polysaccharide, hyaluronan, of a dried protein, bovine serum albumine, and of a dried polymer, a sulfonated polyimide. We also indicate how IR spectrometry conveys original and precise information from which their hydration mechanisms can be precisely determined in terms of chemical reactions.     

Effect of temperature and concentration on the structure of tert-butyl alcohol/water mixtures: near-infrared spectroscopic study

The effect of temperature and concentration on the structure of tert-butyl alcohol/water binary mixtures in the alcohol-rich region (X(H2O) < 0.3) has been studied by using Fourier transform near-infrared (FT-NIR) spectroscopy. The obtained results demonstrate that the addition of a small amount of water to tert-butyl alcohol (2-methyl-2-propanol, abbreviated as TBA) leads to minor changes in the structure of neat TBA and suggest that molecules of TBA in the mixture are in the same environment as those in pure TBA. The bands of water are red-shifted in the mixture relative to bulk water, implying that the molecules of water in TBA are involved in stronger hydrogen bonding. The present experimental data give no evidence for the existence of nonbonded water in the mixture. Even at a very low content of water, the main NIR bands of water (nu(2) + nu(3) and nu(1) + nu(3)) have two components showing markedly different behavior upon an increase in temperature. From the power spectra, it is seen that the extent of intensity changes due to the free OH groups of TBA is smaller in the mixture relative to pure TBA. All of these results support the model of chain-end bonding of water molecules to TBA associates. An increase in X(H2O) reduces the population of nonbonded OH groups of TBA, yet both processes do not appear at the same rate. The amount of bonded OH groups of water increases faster than that of the nonbonded ones. It seems that the water-water interaction becomes more important as X(H2O) increases. At high alcohol content, the position of the CH alkyl stretching bands is constant, evidencing a negligible role of the hydrophobic hydration in the mixture.     

Effect of temperature and concentration on the structure of sec-butyl alcohol and isobutyl alcohol/water mixtures: near-infrared spectroscopic study

The effect of temperature and concentration on the structure of sec-butyl alcohol and isobutyl alcohol/water binary mixtures in the alcohol-rich region (mole fraction of water X(H2O) < 0.3) has been studied using Fourier transform (FT) near-infrared (NIR) spectroscopy. The experimental data were analyzed by a two-dimensional (2D) correlation approach and chemometric methods. It was found that molecules of both alcohols in the mixture with water are in the same environment as those in the pure alcohols. Even at very low water content (X(H2O) = 0.001) we did not observe water free from any specific interactions. The molecules of water are attached to the end free OH groups in the open chain associates of alcohol. In this way the structure of neat alcohol remains intact by addition of water. The water-alcohol interactions in sec-butyl alcohol and isobutyl alcohol/water mixtures are stronger than those in bulk water. The results obtained at higher water content or elevated temperatures indicate the possibility of water-water interaction. In the alcohol-rich region the hydrophobic effects are of minor importance and the structure and properties of these systems are determined by hydrogen bonding through the hydroxyl groups. Both alcohols behave similarly on the temperature or water content variation; the minor difference results from a different degree of self-association for sec-butyl alcohol and isobutyl alcohol.     

Raman spectroscopic study of temperature dependence of water structure in aqueous solutions of a poly(oxyethylene) surfactant

The temperature dependence of the water structure in aqueous solutions of a poly(oxyethylene) surfactant C₁₂E₅ was examined at concentrations 0, 20, 30, 45, 70 and 90 wt% by Raman spectroscopy of the O–H stretching band. The ratio of the intensities of the component around 3200 cm⁻¹ (the collective in-phase O–H stretching vibrations of bonded aggregates) to the component around 3400 cm⁻¹ (the O–H stretches in which the phase relations are lost) was monitored in the temperature range from 0 to 39 °C. The results show that the speed of the thermal destruction of the H-bond network increases as the concentration increases from 0 to 45 wt%. This change is attributed to the existence of a substantial amount of water in the system that takes part in the hydrophobic hydration of the poly(oxyethylene) headgroups, despite their predominantly hydrophilic character. The conclusion that this kind of water, which is known to have restricted mobility, plays an important role in the surfactant–water systems is consistent with the high viscosity of the liquid crystalline phases.     

Two-dimensional correlation infrared spectroscopy studies on the thermal-induced mesophase of 4-nitrobenzohydrazide derivative

Two-dimensional (2D) correlation infrared (IR) spectroscopy has been applied to explore the effect of hydrogen bondings (HBs) on the structure of mesophase in the dissymmetrical 4-nitrobenzohydrazide derivative, N-(4-cetyloxybenzoyl)-N′-(4′-nitrobenzoyl) hydrazine (C16-NO₂). The strength and species of HBs as well as the heat-induced structural variations in mesophase have been investigated. It has been found from 2D correlation IR spectroscopy that the sequential order of changes in the different functionalities in the course of liquid crystalline formation is that, firstly, the alkyl chain changes from the significant population of the trans conformation to the significant population of gauche conformation; then, the intermolecular HB between CO and NH groups is weakened, some even being broken, and consequently, the intermolecular distance is enlarged; finally, the skeleton of phenyl ring has enough space to change their conformation to weaken the π–π stacking interaction. In addition, besides a few free and some medium bonded NH and CO groups, strongly bonded NH and CO groups still predominantly exist in the mesophase.     

An infrared spectroscopic study on the influence of water on alcohols

Summary The influence of the water content on absorption bands in FTIR spectra of monohydric alcohols was studied and the effects were compared to changes in spectra of absolute solvents at various temperatures. The FTIR spectra were recorded by the ATR technique in order to distinguish the weak bands of the solvents from the intensive water bands more easily. By addition of water to anhydrous alcohols both OH stretching and bending bands increased in intensity and width. Similar changes in spectra of anhydrous alcohols can be obtained by decreasing the temperature. Addition of water to monohydric alcohols causes the lengthening of the intramolecular OH bonds to a smaller extent than the shortening of the intermolecular OH bonds. This contraction of the liquid structure is also reflected in other physical and chemical properties.

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Eine infrarotspektroskopische Untersuchung über den Einfluß von Wasser auf Alkohole

Zusammenfassung Der Einfluß des Wassergehalts auf die Absorptionsbanden in den FTIR-Spektren einwertiger Alkohole wurde untersucht und die Effekte mit den Veränderungen der Spektren der absoluten Lösungsmittel bei Temperaturvariationen verglichen. Die FTIR-Spektren wurden mit Hilfe der ATR-Technik aufgenommen, um die meist nur schwachen Banden der Lösungsmittel neben den intensiven Wasserbanden besser erkennen zu können. Es zeigte sich, daß durch Zugabe von Wasser zu absoluten Alkoholen sowohl die OH-Streckschwingungs- als auch die Deformationsschwingungsbande an Intensität und Breite zunehmen. Ähnliche Veränderungen der Banden lassen sich auch in den Spektren von absoluten Alkoholen bei Temperaturerniedrigung feststellen. Diese spektroskopischen Veränderungen werden in folgender Weise interpretiert. Die Zugabe von Wasser zu einwertigen Alkoholen bewirkt die Verlängerung der intramolekularen O-H-Bindungen in schwächerem Ausmaß als die Verkürzung der Intermolekularen O...H-Bindungen, d.h. sie bewirkt eine Erhöhung der Symmetrie der H-Brückenbindungen und eine Verstärkung der O...O-Wechselwirkungen. Diese Verdichtung der Flüssigkeitsstruktur spiegelt sich auch in anderen physikalischen und chemischen Eigenschaften wider.

     

Synthesis, spectroscopic, and electrochemical studies of 1,2-naphthalene-ring-fused tetraazachlorins, -bacteriochlorins, and -isobacteriochlorins: the separation and characterization of structural isomers

1,2-Naphthalene-ring-expanded tetraazachlorins (TACs), tetraazabacteriochlorins (TABCs), and tetraazaisobacteriochlorins (TAiBCs) have been synthesized. Procedures for the synthesis of the starting materials, that is, derivatives of 1,2-naphthalenedicarboxylic acid, have been reinvestigated and improved. Nine possible derivatives, including four, two, and three structural isomers of TACs, TABCs, and TAiBCs, respectively, were separated by using thin-layer chromatography (TLC) or high-performance liquid chromatography (HPLC), and the structure of each isomer was determined by (1)H NMR spectroscopy combined with the NOE technique. The formation ratio of each isomer was rationalized in terms of the intramolecular steric repulsion effect, which was predicted by geometry optimizations at the DFT level. The derived compounds were characterized by using IR, electronic, and magnetic circular dichroism (MCD) spectroscopy, and by electrochemical methods. Frequency calculations at the DFT level correctly reproduced the experimental IR spectra and, in particular, distinguished between the three isomers of the TAiBCs. In the electronic absorption and MCD spectra of the TAC and TABC species, the Q-band splits into two intense components similarly to the 2,3-naphthalene-fused derivatives described in our preceding paper, although no significant spectral differences were observed from species to species. On the other hand, the spectra of the TAiBCs showed moderate differences depending on the structure of the isomer. The spectroscopic properties as well as the electrochemical behavior of these chlorins resemble those of the corresponding benzene-fused derivatives rather than the 2,3-naphthalene-fused derivatives. Molecular-orbital and configuration-interaction calculations within the framework of the ZINDO/S method were helpful in the discussions of the above observations.     

Computational study of pyrylium cation–water complexes: hydrogen bonds, resonance effects, and aromaticity

Hydrogen bonds formed between the pyrylium cation and water were characterized by means of geometric, energetic and electronic parameters through calculations done with the B3LYP/6-31+G(d,p) method. The wavefunctions were analyzed by the Natural Bond Orbitals (NBO), Natural Steric Analysis (NSA), Natural Resonance Theory (NRT), and Atoms in Molecules (AIM) methods. The energy decomposition method proposed by Xantheas was employed. The vibrational frequencies and the intensity of the C–H stretching bands were studied. The Nucleus Independent Chemical Shifts (NICS) and Harmonic Oscillator Model of Aromacity (HOMA) methods were used to verify the aromaticity of the pyrylium cation and the studied complexes. Complexation results in small alterations in the equilibrium geometry of the monomers. Energetic analysis allowed us to verify the stability order of the studied complexes and the intensity of the hydrogen bonds taking place between the monomers. Small alterations in the electronic structure of the monomers occur, indicating that the interaction between pyrylium and water is weak and little contributes to increasing the cation resonance.     

Time-resolved near-infrared and two-dimensional near-infrared correlation spectroscopic studies of the polymerization process of silane coupling agents. Dynamic behavior of water molecules in the 3-aminopropyltriethoxysilane–ethanol–water system

The polymerization behavior of 3-aminopropyltriethoxysilane, a process initiated by water molecules, has been examined using time-resolved near-IR and 2D near-IR correlation spectra. By deconvolution of the time-resolved near-IR spectra, the existence of the component bands at 5189, 5265 and 5300 cm⁻¹, whose intensities decrease markedly as the reaction proceeds, has been confirmed in the 5000–5400 cm⁻¹ region. The band at 5189 cm⁻¹ has been assigned to water molecules, while those at 5265 and 5300 cm⁻¹ have been assigned to the strongly and weakly associated silanol groups, respectively. The kinetics of the hydrolysis of the ethoxy groups and of the formation of a siloxane bond have been analyzed using the time-dependent integral intensities of these three bands and the mechanisms of the reactions have been discussed. Evidence for this polymerization process is also clearly evident in the 2D near-IR correlation spectra. Received: 14 March 2000/Accepted: 15 May 2000     

Hydrogen-bonded systems between monocarboxylic acids and the trinuclear cluster cation [H3Ru3(C6H6)(C6Me6)2(O)]: cold-spray ionisation mass spectroscopic and X-ray crystallographic studies

The hydrogen-bonded systems formed between monocarboxylic acid derivatives and the trinuclear arene-ruthenium cluster cation [H₃Ru₃(C₆H₆)(C₆Me₆)₂(O)]⁺ (1) have been studied in solution by cold-spray ionisation mass spectroscopy (CSI-MS) and in the solid state by single-crystal X-ray structure analysis of the tetrafluoroborate salts. The presence of 1:1 (acid:cluster) adducts in acetone solution has been clearly demonstrated by CSI-MS. Single-crystal X-ray structure analyses of selected acid-cluster complexes show that in every case the hydroxyl of the acid function interacts strongly with the μ₃-oxo ligand of cation 1, the O ? O distance ranging from 2.499(9) to 2.595(11) Å.     

A two-dimensional infrared correlation spectroscopic study on the thermal degradation of poly(2-hydroxyethyl acrylate)-co-methyl methacrylate/SiO2 nanohybrids

Two-dimensional infrared (2D IR) correlation spectroscopy was applied to study the structural changes occurring in the decomposition of PHEA-co-MMA/SiO₂. Complicated absorption spectral changes were observed in the heating process. 2D IR analysis indicates that during heating, covalent bonds, (Si-O-C), between the polymer and the inorganic moiety were formed, which was the main factor in the improvement in thermal properties of the hybrids such as the decomposition temperatures (T_d). The thermal stability of the hybrids was also studied by solid-state ²⁹Si MAS NMR spectroscopy and TGA tests. Their results complemented each other well.     

A comparative study of the volumetric properties of dilute aqueous solutions of 1-propanol, 1,2-propanediol, 1,3-propanediol, and 1,2,3-propanetriol at various temperatures

Excess molar volumes and partial molar volumes were determined for dilute aqueous solutions of 1-propanol, 1,2-propanediol, 1,3-propanediol, and 1,2,3-propanetriol, at temperatures of (283.15, 288.15, 293.15, 298.15, 303.15, and 308.15) K from density measurements. The infinite dilution partial molar volumes of alcohols in aqueous solution were obtained by extrapolation at each temperature. The volumetric behavior of aqueous alcohol and polyol solutions is discussed in terms of the relationship between polar and non-polar groups and its effect on water structure.