Gas-phase C-F bond cleavage in perfluorohexane using W-, Si-, P-, Br-, and I-containing ions: Comparisons with reactions at fluorocarbon surfaces

Gas-phase reactions of W-, Si-, P-, Br-, and I-containing ions with the target molecule perfluorohexane at low collision energies (<15 eV) parallel known ion/surface reactions of the same projectile ions at fluorinated self-assembled monolayer surfaces. Charge exchange, dissociative charge exchange, and fluorine atom abstraction are observed and the majority of the projectile ions also undergo reactive charge exchange to produce specific fluorocarbon fragment ions of the target molecule in distinctive relative abundances. Abstraction of up to five fluorine atoms is observed upon collision of W⁺ with gaseous perfluorohexane, while similar experiments with CI⁺, SiCl⁺, and PCl^+· show abstraction of one or two fluorine atoms. Other projectiles, including Si^+·, PCl ₂ ⁺ , Br⁺, CBr⁺, and I⁺, abstract only a single fluorine atom. These patterns of fluorine atom abstraction are similar to those observed in ion/surface collisions. Also paralleling the ion/surface reactions, halogen exchange (Cl-for-F) reactions occur between the Cl-containing projectile ions and perfluorohexane to produce C₆F₁₂Cl⁺, a product of chemical modification of the target. Collisions of PCl^+· and PCl ₂ ⁺ also result in production of C₆F ₁₂ ^+· , indicating that the corresponding surface modification reaction involving molecular defluorination should be sought. Implications for previously proposed mechanisms, new ion/surface reactions, and for the use of gas-phase studies to guide investigations of the ion/surface reactions are discussed.     

Modeling formation of molecules in the interstellar medium by radical reactions with polycyclic aromatic hydrocarbons

Adsorptions of CH°₂, CH°₃, NH°₂, and OH° radicals and molecule formation on a partially hydrogenated surface of a polycyclic aromatic hydrocarbon (PAH) (C₂₄H₂₇⁺) were modeled. It was found that radical adsorptions are feasible with important modifications of surface bond strengths and bond distances. Adsorbed hydrogen may diffuse due to adsorbate‐surface interactions. Formations of CH₄, NH₃, H₂O, CH₃NH₂, and CH₃OH were studied by Eley‐Rideal (ER) and Langmuir‐Hishelwood (LH) mechanisms. Potential energetic surfaces were performed for both mechanisms and the ER presents lower reaction energy barriers than the LH one, in all cases. Parametric quantum program (CATIVIC) was employed and comparisons with DFT results were performed. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem 110:2560–2572, 2010     

A Theoretical Study of the Interaction of Hydrogen and Oxygen with Palladium or Gold Adsorbed on Pyridine‐Like Nitrogen‐Doped Graphene

The interaction of H₂ and O₂ molecules in the presence of nitrogen‐doped graphene decorated with either a palladium or gold atom was investigated by using density functional theory. It was found that two hydrogen molecules were adsorbed on the palladium atom. The interaction of these adsorbed hydrogen molecules with two oxygen molecules generates two hydrogen peroxide molecules first through a Eley–Rideal mechanism and then through a Langmuir–Hinshelwood mechanism. The barrier energies for this reaction were small; therefore, we expect that this process may occur spontaneously at room temperature. In the case of gold, a single hydrogen molecule is adsorbed and dissociated on the metal atom. The interaction of the dissociated hydrogen molecule on the surface with one oxygen molecule generates a water molecule. The competitive adsorption between oxygen and hydrogen molecules slightly favors oxygen adsorption.     

A Comparative Study of CO Oxidation on Nitrogen‐ and Phosphorus‐Doped Graphene

The geometry, electronic structure, and catalytic properties of nitrogen‐ and phosphorus‐doped graphene (N‐/P‐graphene) are investigated by density functional theory calculations. The reaction between adsorbed O₂ and CO molecules on N‐ and P‐graphene is comparably studied via Langmuir–Hinshelwood (LH) and Eley–Rideal (ER) mechanisms. The results indicate that a two‐step process can occur, namely, CO+O₂→CO₂+O_ads and CO+O_ads→CO₂. The calculated energy barriers of the first step are 15.8 and 12.4 kcal mol^?1 for N‐ and P‐graphene, respectively. The second step of the oxidation reaction on N‐graphene proceeds with an energy barrier of about 4 kcal mol^?1. It is noteworthy that this reaction step was not observed on P‐graphene because of the strong binding of O_ads species on the P atoms. Thus, it can be concluded that low‐cost N‐graphene can be used as a promising green catalyst for low‐temperature CO oxidation.     

Nitrogen‐doped C60 as a robust catalyst for CO oxidation

The O₂ activation and CO oxidation on nitrogen‐doped C₅₉N fullerene are investigated using first‐principles calculations. The calculations indicate that the C₅₉N fullerene is able to activate O₂ molecules resulting in the formation of superoxide species ( ) both kinetically and thermodynamically. The active superoxide can further react with CO to form CO₂ via the Eley–Rideal mechanism by passing a stepwise reaction barrier of only 0.20 eV. Ab initio molecular dynamics (AIMD) simulation is carried out to evidence the feasibility of the Eley–Rideal mechanism. In addition, the second CO oxidation takes place with the remaining atomic O without any activation energy barrier. The full catalytic reaction cycles can occur energetically favorable and suggest a two‐step Eley–Rideal mechanism for CO oxidation with O₂ catalyzed by the C₅₉N fullerene. The catalytic properties of high percentage nitrogen‐doped fullerene (C₄₈N₁₂) is also examined. This work contributes to designing higher effective carbon‐based materials catalysts by a dependable theoretical insight into the catalytic properties of the nitrogen‐doped fullerene. © 2017 Wiley Periodicals, Inc.     

Bent Carbon Surface Moieties as Active Sites on Carbon Catalysts for Phosgene Synthesis

Active sites in carbon‐catalyzed phosgene synthesis from gaseous CO and Cl₂ have been identified using C₆₀ fullerene as a model catalyst. The carbon atoms distorted from sp² coordination in non‐planar carbon units are concluded to generate active Cl₂. Experiments and density functional theory calculations indicate the formation of a surface‐bound [C₆₀???Cl₂] chlorine species with radical character as key intermediate during phosgene formation. It reacts rapidly with physisorbed CO in a two‐step Eley–Rideal‐type mechanism.     

Two phosphate–imidazole complexes with and without a hydrogen‐bonded guest mol­ecule

The mol­ecular structures of the complexes imidazolium 6,6′‐di‐tert‐butyl‐4,4′‐dimethyl‐2,2′‐thio­diphenyl phosphate, C₃H₅N₂⁺·C₂₂H₂₈O₄PS⁻, (I), and imidazolium 6,6′‐di‐tert‐butyl‐4,4′‐dimethyl‐2,2′‐thio­diphenyl phosphate diisopropyl hydrazo­dicarboxyl­ate hemisolvate, C₃H₅N₂⁺·C₂₂H₂₈O₄PS⁻·0.5C₈H₁₆N₂O₄, (II), have been determined. While (I) forms the expected hydrogen‐bonded chain utilizing the two imidazole N‐bound H atoms, in (II), the substituted hydrazine solvent mol­ecule inserts itself between the chains. Compound (I) exhibits a strong N—H⋯O hydrogen bond, with an N⋯O distance of 2.603 (2) Å. The hydrazine solvent molecule in (II) lies about a twofold axis and the N‐bound H atoms are involved in bifurcated hydrogen bonds with phosphate O atoms. A C‐bound H atom of the imidazolium cation is involved in a C—H⋯O inter­action with a carbonyl O atom of the hydrazine solvent mol­ecule.     

A lithium complex of pyridine‐2,6‐dicarboxylic acid

The crystal structure of catena‐poly­[[(6‐carboxy­pyridine‐2‐carb­oxyl­ato‐κ³O,N,O′)­lithium(I)]‐μ‐aqua‐κ²O:O], [Li(C₇H₄NO₄)­(H₂O)]_n, contains the Li⁺ ion coordinated to two O atoms and the N atom of the 6‐carboxy­pyridine‐2‐carboxyl­ate ligand, and to two water O atoms, forming a pentavalent coordination geometry. The molecule resides on a mirror plane which contains the Li and N atoms, the para‐CH unit, and the O atom of the coordinated water mol­ecule. The O atom of the water mol­ecule is coordinated to two Li atoms, forming an infinite polymeric chain.     

Bis(5‐aminotetrazole‐1‐acetato‐κO)tetraaquacobalt(II) and catena‐poly[[cadmium(II)]‐bis(μ‐5‐aminotetrazole‐1‐acetato‐κ3N4:O,O′)]

The Co^II atom in bis(5‐aminotetrazole‐1‐acetato)tetraaquacobalt(II), [Co(C₃H₄N₅O₂)₂(H₂O)₄], (I), is octahedrally coordinated by six O atoms from two 5‐aminotetrazole‐1‐acetate (atza) ligands and four water molecules. The molecule has a crystallographic centre of symmetry located at the Co^II atom. The molecules of (I) are interlinked by hydrogen‐bond interactions, forming a two‐dimensional supramolecular network structure in the ac plane. The Cd^II atom in catena‐poly[[cadmium(II)]‐bis(μ‐5‐aminotetrazole‐1‐acetato], [Cd(C₃H₄N₅O₂)₂]_n, (II), lies on a twofold axis and is coordinated by two N atoms and four O atoms from four atza ligands to form a distorted octahedral coordination environment. The Cd^II centres are connected through tridentate atza bridging ligands to form a two‐dimensional layered structure extending along the ab plane, which is further linked into a three‐dimensional structure through hydrogen‐bond interactions.     

Mechanism of Polymerization of α-Olefins on Oxide Catalysts

The polymerization of ethylene on a chromic oxide catalyst with and without a solvent has been studied. It was found that the active catalyst surface is formed exclusively as a result of its interaction with ethylene. This interaction is accompanied by the formation of products which poison the surface of the catalyst when they are sorbed on it in the absence of a solvent. A catalyst which contains no Cr⁺⁶ atoms as a result of reduction by alcohol is inactive. On the other hand, a catalyst which contains only Cr⁺⁶ atoms becomes active only after it has been partially reduced. The most probable product of this reduction is trivalent chromium atoms. The results obtained have given grounds for the assumption that the active complex contains Cr⁺⁶ and Cr⁺³ atoms. A possible mechanism of the reaction is discussed. Owing to the oxidative action of CrO₃ on the ethylene molecules, part of the Cr⁺⁶ is reduced to Cr⁺³, and the trivalent chromium becomes alkylated. The monomer molecule is added at the Cr⁺³—C bond thus formed. A strong Lewis acid, CrO₃, lowers the electron density on the Cr⁺³ atom. This increases the strength of the Cr⁺³—C bond and the ability of the Cr⁺³ atom to coordinate with the monomer molecule. The monomer molecule enters the chain at the moment when the strength of the Cr^?3—C bond is weakened due to coordination of this molecule with the Cr⁺³ atom.     

A lariat‐functionalized copper(II) di­imine–dioxime complex

The dimeric title copper(II) complex, diaqua‐1κO,2κO‐bis[3,9‐dimethyl‐6‐(2‐pyridyl­methyl)‐4,8‐di­aza­undeca‐3,8‐di­ene‐2,10‐dione dioximato(1?)]‐1k⁴N²,N⁴,N⁸,N¹⁰;1:2κ⁵O²:N²,N⁴,N⁸,N¹⁰‐dicopper(II) diperchlorate, [Cu₂(C₁₇H₂₄N₅O₂)₂](ClO₄)₂, crys­tallizes with one Cu atom in a square‐pyramidal environment and the other Cu atom displaying a distorted octahedral coordination. In each case, the four N atoms in the core of the ligand (two imine and two oxime N atoms) form the base of the pyramid, with a water mol­ecule at an apex. The two parts of the dimer are linked by an interaction [2.869 (2) Å] between one of the Cu atoms and one of the oxime O atoms coordinated to the second Cu atom, and also by a hydrogen bond between the apical water mol­ecule on the second Cu atom and the pyridyl N atom from the coordination sphere of the first Cu atom. The pyridyl N atoms of the lariat arms are not coordinated to either of the Cu atoms. Thus, this potentially pentadentate ligand is only tetradentate when coordinated to Cu^II.     

Thermal activation of methane and ethene by bare MO·+ (M=Ge, Sn, and Pb): a combined theoretical/experimental study

The thermal ion/molecule reactions (IMRs) of the Group 14 metal oxide radical cations MO ^{. +} (M=Ge, Sn, Pb) with methane and ethene were investigated. For the MO ^{. +}/CH₄ couples abstraction of a hydrogen atom to form MOH⁺ and a methyl radical constitutes the sole channel. The nearly barrier‐free process, combined with a large exothermicity as revealed by density functional theory (DFT) calculations, suggests a fast and efficient reaction in agreement with the experiment. For the IMR of MO ^{. +} with ethene, two competitive channels exist: hydrogen‐atom abstraction (HAA) from and oxygen‐atom transfer (OAT) to the organic substrate. The HAA channel, yielding C₂H₃ ^. and MOH⁺ predominates for the GeO ^{. +}/ethene system, while for SnO ^{. +} and PbO ^{. +} the major reaction observed corresponds to the OAT producing M⁺ and C₂H₄O. The DFT‐derived potential‐energy surfaces are consistent with the experimental findings. The behavior of the metal oxide cations towards ethene can be explained in terms of the bond dissociation energies (BDEs) of MO⁺? H and M⁺? O, which define the hydrogen‐atom affinity of MO⁺ and the oxophilicity of M⁺, respectively. Since the differences among the BDEs(MO⁺? H) are rather small and the hydrogen‐atom affinities of the three radical cations MO ^{. +} exceed the BDE(CH₃? H) and BDE(C₂H₃? H), hydrogen‐atom abstraction is possible thermochemically. In contrast, the BDEs(M⁺? O) vary quite substantially; consequently, the OAT channel becomes energetically less favorable for GeO ^{. +} which exhibits the highest oxophilicity among these three group 14 metal ions.     

Mechanisms investigation of the WGSR catalyzed by single noble metal atoms supported on vanadium oxide clusters

The redox and carbonyl mechanisms of the water gas shift reaction (WGSR) catalyzed by the single noble metal (NM) atoms of Ru, Rh, Pd, Ag (from the 4d row) and Os, Ir, Pt, Au (from the 5d row) supported on vanadium oxide cluster ion V₂O₆⁺ have been firstly investigated through the density functional theory (DFT) calculations. Natural population analysis (NPA) shows NMs possess positive charges in the model systems and usually act as reactant molecule trapper and an effective electron store to accept or release electrons. The carbonyl mechanism avoiding the oxygen vacancy (O_v) formation and directing NM‐H bond cleavage is strongly preferred over the redox mechanism. Our computations identified single‐atom catalysts (SAC), especially RhV₂O₆⁺ and PdV₂O₆⁺ exhibit improved overall catalytic performance because of the lower rate‐control step activation barriers via the associate carbonyl mechanism. This work aims to provide some detailed insights into the effects of NM in bimetallic oxide clusters for WGSR at a molecular level, and serves as a starting point for further theoretical studies on the mechanisms of related SAC catalytic reactions.     

Reactivity Control of C?H Bond Activation over Vanadium–Silver Bimetallic Oxide Cluster Cations

Vanadium–silver bimetallic oxide cluster ions (V_xAg_yO_z⁺; x=1–4, y=1–4, z=3–11) are produced by laser ablation and reacted with ethane in a fast‐flow reactor. A reflectron time of flight (Re‐TOF) mass spectrometer is used to detect the cluster distribution before and after the reactions. Hydrogen atom abstraction (HAA) reactions are identified over VAgO₃⁺, V₂Ag₂O₆⁺, V₂Ag₄O₇⁺, V₃AgO₈⁺, V₃Ag₃O₉⁺, and V₄Ag₂O₁₁⁺ ions, in which the oxygen‐centered radicals terminally bonded on V atoms are active sites for the facile HAA reactions. DFT calculations are performed to study the structures, bonding, and reactivity. The reaction mechanisms of V₂Ag₂O₆⁺+C₂H₆ are also given. The doped Ag atoms with a valence state of +1 are highly dispersed at the periphery of the V_xAg_yO_z⁺ cluster ions. The reactivity can be well‐tuned gradually by controlling the number of Ag atoms. The steric protection due to the peripherally bonded Ag atoms greatly enhances the selectivity of the V–Ag bimetallic oxide clusters with respect to the corresponding pure vanadium oxide systems.     

Self‐assembly properties of Salamo‐type trinuclear Cu(II) and Co(II) complexes based on the regulation of H+/OHˉ

A novel naphthalenediol‐based bis(salamo)‐type tetraoxime compound (H₄L) was designed and synthesized. Two new supramolecular complexes, [Cu₃(L)(μ‐OAc)₂] and [Co₃(L)(μ‐OAc)₂(MeOH)₂]·4CHCl₃ were synthesized by the reaction of H₄L with Cu(II) acetate dihydrate and Co(II) acetate dihydrate, respectively, and were characterized by elemental analyses and X‐ray crystallography. In the Cu(II) complex, Cu1 and Cu2 atoms located in the N₂O₂ sites, and are both penta‐coordinated, and Cu3 atom is also penta‐coordinated by five oxygen atoms. All the three Cu(II) atoms have geometries of slightly distorted tetragonal pyramid. In the Co(II) complex, Co1 and Co3 atoms located in the N₂O₂ sites, and are both penta‐coordinated with geometries of slightly distorted triangular bipyramid and distorted tetragonal pyramid, respectively, while Co2 atom is hexa‐coordinated by six oxygen atoms with a geometry of slightly distorted octahedron. These self‐assembling complexes form different dimensional supramolecular structures through inter‐ and intra‐molecular hydrogen bonds. The coordination bond cleavages of the two complexes have occurred upon the addition of the H⁺, and have reformed again via the neutralization effect of the OH^?. The changes of the two complexes response to the H⁺/OH^? have observed in the UV–Vis and ¹H NMR spectra.     

Redetermination of (6R,7S,9S,11S)‐(–)‐sparteinium monoperchlorate

The structure of the title compound, C₁₅H₂₇N₂⁺·ClO₄^?, consists of a monoprotonated sparteinium cation and a perchlorate anion. The two tertiary N atoms of the cation, one perchlorate O atom and a H atom form a bifurcated hydrogen bond, the four hydrogen‐bonding atoms being nearly in the same plane.     

(2‐Methyl­quinolin‐8‐olato)­iron(III) and ‐copper(II) complexes

The crystal structures of tris(2‐methyl­quinolin‐8‐olato‐N,O)­iron(III), [Fe­(C₁₀­H₈­NO)₃], (I), and aqua­bis(2‐methyl­quinolin‐8‐olato‐N,O)­copper(II), [Cu­(C₁₀­H₈NO)₂­(H₂O)], (II), have been determined. Compound (I) has a distorted octahedral configuration, in which the central Fe atom is coordinated by three N atoms and three O atoms from three 2‐methylquinolin‐8‐olate ligands. The three Fe—O bond distances are in the range 1.934 (2)–1.947 (2) Å, while the three Fe—N bond distances range from 2.204 (2) to 2.405 (2) Å. In compound (II), the central Cu^II atom and H₂O group lie on the crystallographic twofold axis and the coordination geometry of the Cu^II atom is close to trigonal bipyramidal, with the three O atoms in the basal plane and the two N atoms in apical positions. The Cu—N bond length is 2.018 (5) Å. The Cu—O bond length in the basal positions is 1.991 (4) Å, while the Cu—O bond length in the apical position is 2.273 (6) Å. There is an intermolecular OW—H?O hydrogen bond which links the mol­ecules into a linear chain along the b axis.     

Nitrogen incorporation in saturated aliphatic C6–C8 hydrocarbons and ethanol in low‐pressure nitrogen plasma generated by a hollow cathode discharge ion source

Ion/molecule reactions of saturated hydrocarbons (n‐hexane, cyclohexane, n‐heptane, n‐octane and isooctane) in 28‐Torr N₂ plasma generated by a hollow cathode discharge ion source were investigated using an Orbitrap mass spectrometer. It was found that the ions with [M+14]⁺ were observed as the major ions (M: sample molecule). The exact mass analysis revealed that the ions are nitrogenated molecules, [M+N]⁺ formed by the reactions of N₃⁺ with M. The reaction, N₃⁺ + M → [M+N]⁺ + N₂, were examined by the density functional theory calculations. It was found that N₃⁺ abstracts the H atom from hydrocarbon molecules leading to the formation of protonated imines in the forms of R′R″C?NH₂⁺ (i.e. C–H bond nitrogenation). This result is in accord with the fact that elimination of NH₃ is the major channel for MS/MS of [M+N]⁺. That is, nitrogen is incorporated in the C–H bonds of saturated hydrocarbons. No nitrogenation was observed for benzene and acetone, which was ascribed to the formation of stable charge‐transfer complexes benzene????N₃⁺ and acetone????N₃⁺ revealed by density functional theory calculations. Copyright © 2016 John Wiley & Sons, Ltd.     

2,6‐Dimethoxy‐7,9‐dimethylpurinium iodide hemihydrate

In the title compound, C₉H₁₃N₄O₂⁺·I⁻·0.5H₂O, the non‐H atoms of the ionic components lie on a mirror plane in Cmca, with the O atom of the partial water molecule lying on a twofold rotation axis. Whereas one of the methoxy methyl groups is directed away from the adjacent N‐methyl group, the other methoxy methyl group is directed towards its adjacent N‐methyl group. The conformation of the methoxy methyl groups provides an explanation for the outcomes of intramolecular thermal rearrangements of 2,6‐dialkoxy‐7,9‐dimethylpurinium salts.     

DFT Study of Cyanide Oxidation on Ge-Doped Carbon Nanotubes

In recent years, the discovery of efficient catalyst with low price to cyanide (CN) oxidation in normal temperature is a major concern in the industry. In present study, in first step the carbon nanotubes (CNTss) were doped with Ge and the surface of Ge-doped CNTss via O₂ molecule were activated. In second step the CN oxidation on activated Ge-CNTss surface via Langmuir–Hinshelwood (LH) and Eley–Rideal (ER) mechanisms was investigated. Results show that O₂ activated Ge-CNTs surface can oxidize the CN molecule via Ge-CNTs–O–O* + CN → Ge-CNTs–O–O*–CN → Ge-CNTs–O* + OCN and Ge-CNTs–O* + CN → Ge-CNTs + OCN reactions. Results show that CN oxidation on activated Ge-CNTs surface via the LH mechanism has lower energy barrier than ER mechanism. Finally, calculated parameters reveal that activated Ge-CNTss is acceptable catalyst with low price and high performance for CN oxidation in normal temperature.