Fragmentation of selected C6H10O isomers: Evidence for a common [C5H7O]+ ion generated by methyl loss from cyclohexene oxide and 5,6-dihydro-4-methyl-2H-pyran

The loss of CH₃˙ from the molecular ions of cyclohexene oxide and 5,6-dihydro-4-methyl-2H-pyran has been investigated. On the basis of metastable peak shape analysis, collision-induced dissociation/mass-analysed ion kinetic energy spectra and thermochemical data it is concluded that the same [C₅H₇O]⁺ ion is formed in both cases.     

Electron impact mass spectra of chlorinated methyl propanoates

The mass spectral fragmentations of all eleven chlorinated methyl propanoates have been studied. Deuterium labelling and metastable ion analysis were used to elucidate the fragmentation mechanism. The molecular ion peaks of all compounds are small, except methyl 3,3-dichloropanoate (38%). In most cases α-cleavage gives the base peak [COOCH₃]⁺, and the loss of a chlorine atom from the molecular ion is characteristic of the 3-chloro, 3,3-dichloro and 3,3,3-trichloro compounds. Metastable ions showed the losses of small neutral molecules such as CH₃OH, CH₂CO, CO₂ and CO from the [M? Cl]⁺ ion. α-Cleavage and the loss of Cl^˙ gives an intense [M? COOCH₃? Cl]^+˙ peak, which is the base peak in the spectra of the 2,3-dichloro and 2,3,3-trichloro compounds.     

Synthesis and mass spectra of some 1-aroylamino-5-arylaminomethyl-1,2,3-triazoles

The title compounds 2 are prepared from the reaction of 1-(N, N-diaroyl)amino-5-bromomethyl-1,2,3-triazoles with aromatic amines. The fragmentation pattern upon electron impact at 70 eV of compounds 2 is studied. The molecular ion peak is present in all the spectra examined. Besides the [M-28]⁺⁺, there is also a more abundant [M-29]⁺ peak, corresponding to a N₂H loss of the molecular ion. The ion Ar²NH = CH₂ is the base or the most prominent peak.     

The mass spectrometry of volatile derivatives—II: N-alkyl trifluoracetamides

Under electron-impact, N-alkyl trifluoracetamides exhibit peaks due to [CF₃]⁺ and [M ? CF₃]⁺. Ions corresponding to [COCF₃]⁺ are absent. The base peak in many straight chain derivatives occurs at m/e 126 due to alkyl radical loss from the molecular ion; the mass of this ion rising to m/e 140 in the α-substituted N-sec-butyltrifluoracetamide and to m/e 154 in the tert-butyl derivative. High resolution measurements on a number of peaks indicate that they originate by loss of HF from other fragment ions.     

Mass spectral fragmentation pattern of 3-(2′-hydroxyethyl)quinolin-2(1H)-one and its derivatives

Fragmentation patterns resulting from electron impact ionization of 3-(2′-hydroxyethyl)quinolin-2(1H)-one, three of its monosubstituted derivatives and four of its disubstituted derivatives were studied. The molecular ion of quinolinone-2-etbanol undergoes initial fragmentation with the loss of OH^·, H₂O, CO, ^·CHO, CH₂O, CH₂OH^·, CH₂?CHOH and HCNO species. The [M – CHO]⁺ ion is tentatively suggested to have been formed by the expulsion of H^· from the [M – CO]^+· ion and the [M - CHO]⁺ peak may be considered as diagnostic of a 2-quinolone-3-ethanol.     

Ortho,Effects in organic molecules on electron impact: X—unusual ortho effects of the methyl group in o-picolinotoluidide

The mass spectrum of o-picolinotoluidide gives rise to three major fragments at m/z 184, m/z 169 and m/z 168, corresponding to the loss of CO from the molecular ion followed by the loss of ?H₂ and ?H₃ by independent pathways. It has been shown that the ortho methyl group and the nitrogen of the pyridine ring in the 2-position are involved in the formation of these three major fragments observed in the mass spectrum of o-picolinotoluidide. The mass spectrum of 2-(o-toluidino) pyridine, the molecular ion of which can resemble the [M? CO]⁺ ion in o-picolinotoluidide, also shows loss of CH₃ and NH₂ radicals from the molecular ions. Based on these observations coupled with the high resolution data, the mass analysed ion kinetic energy spectrometry and high voltage scans of these fragments in both the compounds, two mechanistic pathways have been proposed for the formation of these ions in o-picolinotoluidide.     

Multiphoton dissociation/ionisation of dimethyl sulphide (CH3SCH3) at 355 and 532 nm

Multiphoton dissociation/ionization has been studied for CH₃SCH₃ at 355 and 532 nm using a time-of-flight mass spectrometer. The major ion signals observed at 355 nm are C⁺, CH₃ ⁺, HCS⁺, CH₂S⁺, CH₃S⁺ and CH₃SCH₃ ⁺. Power dependence studies at 355 nm show a (2+1) REMPI process for the formation of parent ion. Peaks atm/e = 46, 47 and 61 show two-photon laser power dependence whereasm/e = 15 and 45 peaks show four-photon dependence. However, in 532 nm photo-ionisation, no parent ion signal is observed. A peak atm/e = 35 corresponding to SH₃ ⁺ has been observed. SH₃ ⁺ has been suggested to originate from CH₃SCH₂ ⁺ via a cyclic transition state. Photoionisation results of CH₃SCH₃ have been compared with those of CH₃SSCH₃, at these two wavelengths.     

Sub-TG relaxations in LiClO4-poly (propylene glycol)-2000 solutions

The dielectric permittivity and loss of LiClO₄ solutions in poly (propylene glycol (PPG)), molecular weight 2000, have been measured over a concentration range up to a ratio of Li⁺ to oxygen atoms in PPG of 33.3:100, between 77 and 350 K. The data have been analyzed in both the permittivity and electrical modulus formalisms. Addition of LiClO₄ to poly (propylene glycol) first increases the height of the β-relaxation peak, and ultimately a second sub-T_g relaxation peak at a higher temperature emerges. This is in addition to the β-relaxation peak due to the reorientation of PPG dipoles, whose strength decreases from that in pure PPG-2000. For a fixed temperature, the dc conductivity initially decreases with increasing Li⁺ concentration up to 20 Li⁺ per 100 O atoms and thereafter increases. This concentration corresponds to that at which the T_g of the solution reaches its limiting value of ca. 310 K. It is concluded that the formation of ion pairs causes a second and slower sub-T_g relaxation process and that the increase in the efficiency of chain packing reduces the strength of the β-relaxation of the polymer.     

Mass spectra of halogenated esters 5—Chloromethyl esters of aliphatic C2?C12 n-carboxylic acids and their monochlorinated derivatives

A study has been made of the mass spectral fragmentation upon electron impact of aliphatic C₂? C₁₂ chloromethyl esters and all their 66 monochlorinated derivatives. The fragmentation pathways of the parent chloromethyl esters were elucidated with the aid of the 1st FFR metastable ions. A McLafferty rearrangement gives the base peak in the C₆? C₁₁ parent esters and in almost all the 4-chloro and ω-chloro isomers. The subsequent loss of HCl gives a very characteristic peak of the chloromethyl esters and their (3-ω)-chloro derivatives at m/z 72, [C₃H₄O₂]⁺. The 2-chloro isomers have the corresponding chlorine-containing fragment ion at m/z 106/108. The mass spectra of 2-, 3-, 4-, 5- and ω-chloro isomers give the characteristic fragment ions, the mass spectra of the other isomers being very similar.     

Competing metastable transitions of the [C7H6F]+ ion

Metastable transitions arising from the loss of C₂H₂ and HF from the [C₇H₆F]⁺ ion have been investigated. Under standard operating conditions, the intensity ratio of the metastable peaks was approximately independent of the precursor of the [C₇H₆F]⁺ ion, indicating fragmentation from a common structure such as the symmetrical fluorotropylium ion. The variation of the intensity ratio with several instrumental parameters suggests that I(C₂H₂ loss)/I(HF loss) rises as the internal energy of the [C₇H₆F]⁺ ion falls. Possible interference from discrimination effects at the β-slit when comparing intensity ratios for first and second field free region are discussed.     

Studies of consecutive reactions of organic ions in a reversed geometry mass spectrometer

Over thirty consecutive reactions of a type m₁⁺ → m₂⁺ → m₃⁺ have been studied in a variety of organic compounds using a reversed geometry mass spectrometer. Two field free regions allow the separation of the two steps that make up the consecutive reaction sequence. Translational energy release measurements are used in the comparison of m₂⁺ ions formed as a result of a high energy process in the ion source with m₂⁺ ions formed as a product of a metastable decomposition. In some cases the structures of such ions have been found to be different. Examples have also been found where consecutive fragmentations of metastable ions do not occur although, when higher energy ions within the source are studied, the two-step reaction does take place. Furthermore, it has been found that a control over ion internal energy may be achieved by selecting portions of a peak due to the fragmentation of a metastable ion. Unimolecular reactions may then be used to study the reactivity of such ‘energy-selected’ ions; collision induced reactions can be used to study the structure of both the reactive and unreactive energy selected ions.     

Stereochemical applications of mass spectrometry. 3—Energy dependence of the fragmentation of stereoisomeric methylcyclohexanols

Breakdown graphs have been constructed from charge exchange data for the epimeric 2-methyl-, 3-methyl- and 4-methyl-cyclohexanols. Although the breakdown graphs for epimeric pairs are essentially identical above ～12 eV recombination energy, significant differences are observed for the epimeric 2-methyl- and 4-methyl-cyclohexanols at low internal energies. For the 2-methylcyclohexanols the ratio ([M? H₂O]^+·/[M]^+·)_cis/([M? H₂O]^+·/[M]^+·)_trans is 3.2 in the [C₆F₆]^+· charge exchange mass spectra. This is attributed to both energetic and conformational effects which favour the stereospecific cis-1,4-H₂O elimination for the cis epimer. The breakdown graph for trans-4-methylcyclohexanol shows a sharp peak in the abundance of the [M? H₂O]^+· ion at ～10 eV recombination energy which is absent from the breakdown graph for the cis epimer. This peak is attributed to the stereospecific cis-1,4-elimination of water from the molecular ion of the trans isomer; the reaction appears to have a low critical energy but a very unfavourable frequency factor, and alternative modes of water loss common to both epimers are observed at higher energies. As a result, in the [C₆F₆]^+· charge exchange mass spectra the ([M? H₂O]^+·/[M]^+·)_trans/([M? H₂O]^+·/[M]^+·)_cis ratio is ～24, compared to the value of 13 observed in the 70 eV EI mass spectra. No differences are observed in either the metastable ion abundances or the associated kinetic energy releases for epimeric molecules.     

A study on mass spectrometry of methylated [60] fullerenes using the “in-beam” electron impact technique

Mass spectra of the methylated [60]fullerenes were obtained by EI mass spectrometry using “desorption” or “in-beam” technique. The mass spectra of the methylated fullerenes, C₆₀Me_n, have the molecular ion peak M⁺ indicating that the product is stable under the MS (EI) conditions. The appearance of an intense peak at m/z 360 was assigned to the formation of fullerene dication C₆₀⁺⁺. The remaining peaks were assigned to successive loss of methyl groups from molecular monocation and dication.     

Collision‐induced dissociation processes of protonated benzoic acid and related compounds: competitive generation of protonated carbon dioxide or protonated benzene

Upon activation in the gas phase, protonated benzoic acid (m/z 123) undergoes fragmentation by several mechanisms. In addition to the predictable water loss followed by a CO loss, the m/z 123 ion more intriguingly eliminates a molecule of benzene to generate protonated carbon dioxide (H ‐ O⁺ ═ C ≡ O , m/z 45), or a molecule of carbon dioxide to yield protonated benzene (m/z 79). Experimental evidence shows that the incipient proton ambulates during the fragmentation processes. For the CO₂ or benzene loss, protonated benzoic acid transfers the charge‐imparting proton initially to the ortho position and then to the ipso position to generate a transient species which dissociates to form an ion‐neutral complex between benzene and protonated CO₂. The formation of the m/z 45 ion is not a phenomenon unique to benzoic acid: spectra from protonated isophthalic acid, terephthalic acid, trans‐cinnamic acid and some aliphatic acids also displayed a peak for m/z 45. However, the m/z 45 peak is structurally diagnostic only for certain benzene polycarboxylic acids because the spectra of compounds with two carboxyl groups on adjacent ring carbons do not produce a peak at m/z 45. For the m/z 79 ion to be formed, an intramolecular reaction should take place in which protonated CO₂ within the ion‐neutral complex acts as the attacking electrophile to transfer a proton to benzene. Copyright © 2017 John Wiley & Sons, Ltd.     

The mechanism of elimination of an H2O molecule in desmethylencecalin under electron impact

The mass spectrum of desmethylencecalin has been measured and a fragmentation mechanism for the loss of a water molecule from the [M? CH₃]⁺ ion is proposed on the basis of isotope labelling and metastable peak observations. The eliminated water has been shown to involve the carbonyl oxygen and hydrogen atoms of the hydroxyl and acetyl groups.     

o-nitroaniline derivatives. IV—The mass spectra of o-nitroanils

The principal feature of the mass spectra of o-nitroanils, ArCH?NC₆H₄NO₂(o-), is an intense peak corresponding to the [ArCO]⁺ ion; this implies oxygen transfer from the nitro group to the azomethine carbon during the fragmentation process. In this series of anils, loss of OH from the molecular ion is not apparently an important fragmentation pathway, in contrast to the fragmentation of o-nitrobenzylideneanilines. Benzylideneaniline derivatives with an o-nitro substituent in both rings have mass spectra which indicate interaction of both nitro groups with the ? CH?N? group, but in this series of spectra the [M—17]⁺ ion is again of low intensity.     

Rearrangement reaction of the hydroxyl group of ω-hydroxy-alkyltriphenyl phosphonium bromides

No molecular ion peak from the Electron Impact lonization of eight co-hydroxyalkyltriphenyl phosphonium bromides(Ph3P (CH2)nOHBr-,n=2-6,8-10)can be found,except a part of some relative powerful fragment ions can be observed only.Each compound forms a very characteristic ion(O=PPbj-1) at m/z 277 through hydroxyl rearrangement reaction.The intensity of this ion is closely related with the size of the carbon chain of hydroxyalkyl and with temperature of ion source and temperature of sample probe.The above rearrangement reaction and the reaction to form ion at m/z 262 take place simultaneously,thus leading to strong competition.At n=2,ion at m/z 277 is the most powerful and becomes continuously the base peak.At n=3 and n=4,the intensity of ion at m/z 262 reaches the maximum,and is always the base peak,and the relative abundance of m/z 277 is only around 2%.At n=5,6,8,9,10,m/z 277 becomes base peak when the temperature of probe is below 300℃.But,when the temperature increases from 300℃to 350℃,m/z 262 sud     

Metastable ion studies. 4—mass spectral fragmentation and isomerization in the esters of chlorinated propenoic acids

Metastable peaks have been used to study the fragmentation pathways of the methyl and trideuteriomethyl chloropropenoates and chloromethyl propenoate. The molecular ion peaks of the unsaturated esters are more intense than those of the saturated esters, α-Cleavage, [M? OCH₃]⁺, produces the base peak in almost all compounds, the relative abundances of the additional peaks being low for chloromethyl propenoate. The losses of H₂O, CH₃^. and COOH^. indicate the isomerization of some ionized chloro esters to the chlorinated 2-butenoic acid molecular ions. An intense loss of H₂O observed for methyl 2-chloropropenoate indicates its most facile isomerization, [ester]^+˙ → [acid]^+˙, whereas the isomerization in methyl trichloropropenoate could not be observed. The molecular ion of chloromethyl propenoate, however, also seems to partly rearrange to the chlorinated 3-butenoic acid ion, since the first field free region metastable peak shows a weak loss of CO. The new reaction pathways, i.e. the losses of CHO^˙, CH₂O and CH₂CO from ionized chloromethyl propenoate, were detected.     

Characterization of N‐Boc/Fmoc/Z‐N′‐formyl‐gem‐diaminoalkyl derivatives using electrospray ionization multi‐stage mass spectrometry

N‐Boc/Fmoc/Z‐N′‐formyl‐gem‐diaminoalkyl derivatives, intermediates particularly useful in the synthesis of partially modified retro‐inverso peptides, have been characterized by both positive and negative ion electrospray ionization (ESI) ion‐trap multi‐stage mass spectrometry (MSⁿ). The MS² collision induced dissociation (CID) spectra of the sodium adduct of the formamides derived from the corresponding N‐Fmoc/Z‐amino acids, dipeptide and tripeptide acids show the [M + Na‐NH₂CHO]⁺ ion, arising from the loss of formamide, as the base peak. Differently, the MS² CID spectra of [M + Na]⁺ ion of all the N‐Boc derivatives yield the abundant [M + Na‐C₄H₈]⁺ and [M + Na‐Boc + H]⁺ ions because of the loss of isobutylene and CO₂ from the Boc protecting function. Useful information on the type of amino acids and their sequence in the N‐protected dipeptidyl and tripeptidyl‐N′‐formamides is provided by MS² and subsequent MSⁿ experiments on the respective precursor ions. The negative ion ESI mass spectra of these oligomers show, in addition to [M‐H]^?, [M + HCOO]^? and [M + Cl]^? ions, the presence of in‐source CID fragment ions deriving from the involvement of the N‐protecting group. Furthermore, MSⁿ spectra of [M + Cl]^? ion of N‐protected dipeptide and tripeptide derivatives show characteristic fragmentations that are useful for determining the nature of the C‐terminal gem‐diamino residue. The present paper represents an initial attempt to study the ESI‐MS behavior of these important intermediates and lays the groundwork for structural‐based studies on more complex partially modified retro‐inverso peptides. Copyright © 2013 John Wiley & Sons, Ltd.     

Differentiation of Boc‐protected α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptide positional isomers by electrospray ionization tandem mass spectrometry

Two new series of Boc‐N‐α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptides containing repeats of L ‐Ala‐δ⁵‐Caa/δ⁵‐Caa‐L ‐Ala and β³‐Caa‐δ⁵‐Caa/δ⁵‐Caa‐β³‐Caa (L ‐Ala = L ‐alanine, Caa = C‐linked carbo amino acid derived from D ‐xylose) have been differentiated by both positive and negative ion electrospray ionization (ESI) ion trap tandem mass spectrometry (MS/MS). MSⁿ spectra of protonated isomeric peptides produce characteristic fragmentation involving the peptide backbone, the Boc‐group, and the side chain. The dipeptide positional isomers are differentiated by the collision‐induced dissociation (CID) of the protonated peptides. The loss of 2‐methylprop‐1‐ene is more pronounced for Boc‐NH‐L ‐Ala‐δ‐Caa‐OCH₃ (1), whereas it is totally absent for its positional isomer Boc‐NH‐δ‐Caa‐L ‐Ala‐OCH₃ (7), instead it shows significant loss of t‐butanol. On the other hand, second isomeric pair shows significant loss of t‐butanol and loss of acetone for Boc‐NH‐δ‐Caa‐β‐Caa‐OCH₃ (18), whereas these are insignificant for its positional isomer Boc‐NH‐β‐Caa‐δ‐Caa‐OCH₃ (13). The tetra‐ and hexapeptide positional isomers also show significant differences in MS² and MS³ CID spectra. It is observed that ‘b’ ions are abundant when oxazolone structures are formed through five‐membered cyclic transition state and cyclization process for larger ‘b’ ions led to its insignificant abundance. However, b₁⁺ ion is formed in case of δ,α‐dipeptide that may have a six‐membered substituted piperidone ion structure. Furthermore, ESI negative ion MS/MS has also been found to be useful for differentiating these isomeric peptide acids. Thus, the results of MS/MS of pairs of di‐, tetra‐, and hexapeptide positional isomers provide peptide sequencing information and distinguish the positional isomers. Copyright © 2010 John Wiley & Sons, Ltd.