Intermolecular C—H...π interactions in 1,5‐diphenyl‐3‐(2‐pyridyl)‐2‐pyrazoline

The title compound, C₂₀H₁₇N₃, is a derivative of 1,3,5‐triaryl‐2‐pyrazoline and can act as an N,N′‐bidentate ligand. This molecule features strong fluorescence that can be explained by an extended pyridyl–C=N—N–phenyl system. The three‐dimensional structure is formed by means of an extended network of weak C—H...π hydrogen bonds supported by π–π interactions.     

trans‐4‐[4‐(Dimethylamino)phenyl­iminomethyl]‐N‐phenylpyridinium hexafluorophosphate

The crystal structure of the dipolar chromophoric title compound, C₂₀H₂₀N₃⁺·PF₆^?, is described. The phenyl­ene and pyridyl rings are almost coplanar [dihedral angle 7.5 (2)°], but the phenyl substituent forms a dihedral angle of 56.6 (1)° with the pyridyl ring. The compound crystallizes in the non‐centrosymmetric space group Cc and is a likely candidate for the display of quadratic non‐linear optical effects.     

(6‐Oxido‐2‐oxo‐1,2‐dihydropyrimidine‐5‐carboxylato‐κ2O5,O6)bis[2‐(2‐pyridyl)‐1H‐benzimidazole‐κ2N2,N3]manganese(II) monohydrate

In the title compound, [Mn(C₅H₂N₂O₄)(C₁₂H₉N₃)₂]·H₂O, the Mn^II centre is surrounded by three bidentate chelating ligands, namely, one 6‐oxido‐2‐oxo‐1,2‐dihydropyrimidine‐5‐carboxylate (or uracil‐5‐carboxylate, Huca²⁻) ligand [Mn—O = 2.136 (2) and 2.156 (3) Å] and two 2‐(2‐pyridyl)‐1H‐benzimidazole (Hpybim) ligands [Mn—N = 2.213 (3)–2.331 (3) Å], and it displays a severely distorted octahedral geometry, with cis angles ranging from 73.05 (10) to 105.77 (10)°. Intermolecular N—H...O hydrogen bonds both between the Hpybim and the Huca²⁻ ligands and between the Huca²⁻ ligands link the molecules into infinite chains. The lattice water molecule acts as a hydrogen‐bond donor to form double O...H—O—H...O hydrogen bonds with the Huca²⁻ O atoms, crosslinking the chains to afford an infinite two‐dimensional sheet; a third hydrogen bond (N—H...O) formed by the water molecule as a hydrogen‐bond acceptor and a Hpybim N atom further links these sheets to yield a three‐dimensional supramolecular framework. Possible partial π–π stacking interactions involving the Hpybim rings are also observed in the crystal structure.     

Synthesis,Crystal Structure,and Spectral Properties of Two Manganese(II) and Zinc(II) Complexes with 3,4‐Dimethyl‐5‐(2‐pyridyl)‐1,2,4‐triazole

Two complexes, cis‐[MnL₂(NCS)₂] ( 1 ) and cis‐[ZnL₂(NCS)₂] ( 2 ) with asymmetrical substituted triazole ligands [L = 3,4‐dimethyl‐5‐(2‐pyridyl)‐1,2,4‐triazole], were synthesized and characterized by elemental analysis, UV/Vis and FT‐IR spectroscopy as well as thermogravimetric analyses (TGA), powder XRD, and single‐crystal X‐ray diffraction. In the complexes, each L molecule adopts a chelating bidentate mode by the nitrogen atoms of pyridyl and triazole. Both complexes have a similar distorted octahedral [MN₆] core (M = Mn²⁺ and Zn²⁺) with two NCS^– ions in the cis position.     

Absolute structure of the chiral pyrrolidine derivative (2S)‐methyl (Z)‐5‐(2‐tert‐butoxy‐1‐cyano‐2‐oxoethylidene)pyrrolidine‐2‐carboxylate,a compound with low resonant scattering

The enantiopure monopyrrolidine derivative (2S)‐methyl (Z)‐5‐(2‐tert‐butoxy‐1‐cyano‐2‐oxoethylidene)pyrrolidine‐2‐carboxylate, C₁₃H₁₈N₂O₄, ( 1 ), represents a potential ligand and an attractive intermediate for the synthesis of chiral metal complexes. At the molecular level, the compound features an intramolecular N—H…O hydrogen bond; neighbouring molecules interact via N—H…N contacts to form chains along [100]. Due to its elemental composition, resonant scattering of the target compound is entirely insignificant for diffraction experiments with Mo Kα and small even for Cu Kα radiation. A preliminary study with the harder radiation type confirmed the chiral space group and the suitability of the single crystal chosen; as expected, the results concerning the absolute structure remained completely inconclusive. A second data collection with the longer wavelength gave satisfactory quality indicators for the correct handedness of the molecule, albeit with high standard uncertainties. The absolute configuration has been assessed independently: CD spectra for both enantiomers of the target molecule were calculated and the spectrum for the S‐configured stereoisomer was in agreement with the experiment. The Cotton effect of ( 1 ) may be ascribed to π–π* transitions from HOMO to LUMO and from HOMO to LUMO+1. As both independent techniques agree with respect to the handedness of the target molecule, the absolute structure may be assigned with a high degree of confidence.     

Pseudohalide‐directed Assembly of Two Zinc(II) Coordination Polymers with a 3,4‐Bis(3‐pyridyl)‐5‐(4‐pyridyl)‐1,2,4‐triazole Tecton

The zinc(II) pseudohalide complexes {[Zn(L³³⁴)(SCN)₂(H₂O)](H₂O)₂}_n ( 1 ) and [Zn(L³³⁴)(dca)₂]_n ( 2 ) were synthesized and characterized using the ligand 3,4‐bis(3‐pyridyl)‐5‐(4‐pyridyl)‐1,2,4‐triazole (L³³⁴) and ZnCl₂ in presence of thiocyanate (SCN^–) and dicynamide [dca, N(CN)₂^–] respectively. Single‐crystal X‐ray structural analysis revealed that the central Zn^II atoms in both complexes have similar octahedral arrangement. Compound 1 has a 2D sheet structure bridged by bidentate L³³⁴ and double μ_N,S‐thiocyanate anions, whereas complex 2 , incorporating with two monodentate dicynamide anions, displays a two‐dimensional coordination framework bridged by tetradentate L³³⁴ ligand. Structural analysis demonstrated that the influence of pseudohalide anions plays an important role in determining the resultant structure. Both complexes were characterized by IR spectroscopy, microanalysis, and powder X‐ray diffraction techniques. In addition, the solid fluorescence and thermal stability properties of both complexes were investigated.     

Capillary GC using pyridyl β‐cyclodextrin stationary phase

A new β‐CD derivative, heptakis [2,6‐di‐O‐pentyl‐3‐O‐(4′‐chloro‐5′‐pyridylmethyl)]‐β‐CD, was synthesized by the selective introduction of a pyridyl group on the 3‐positions of β‐CD. The chromatographic properties of the pyridyl β‐CD derivative were studied by using it as the stationary phase in capillary GC. The polarity of the prepared stationary phase was moderate, and the separation results demonstrated that the prepared stationary phase possessed excellent separation ability and chiral recognition for a wide range of analytes. Not only the aromatic positional isomers, such as o‐, m‐, p‐xylene and α‐, β‐naphthol isomers, but also some compounds with multi‐stereogenic centers, such as n‐(1‐methylpropyl)‐3‐(2,2‐dichloroethenyl)‐2,2‐dimethylcyclopropanecarboxamide and n‐(1‐methylpropyl)‐3‐(2‐chloro‐3,3,3‐trifluoropropenyl)‐2,2‐dimethylcyclopropanecarboxamide with three stereogenic centers including eight configurational isomers, were successfully separated. The results also indicated that the polarity of the β‐CD derivative, and the hydrogen bonding between the β‐CD derivative, and the analytes had a very important effect on separation.     

[2‐(2‐Pyridyl)‐1H‐benzimidazole‐κ2N2,N3]bis(p‐toluato‐κ2O,O′)manganese(II)

In the title compound, [Mn(C₈H₇O₂)₂(C₁₂H₉N₃)], the manganese(II) centre is surrounded by three bidentate chelating ligands, namely, one 2‐(2‐pyridyl)benzimidazole ligand [Mn—N = 2.1954 (13) and 2.2595 (14) Å] and two p‐toluate ligands [Mn—O = 2.1559 (13)–2.2748 (14) Å]. It displays a severely distorted octahedral geometry, with cis angles ranging from 58.87 (4) to 106.49 (5)°. Intermolecular C—H...O hydrogen bonds between the p‐toluate ligands link the molecules into infinite chains, and every two neighbouring chains are further coupled by N—H...O and C—H...O hydrogen bonds between the 2‐(2‐pyridyl)benzimidazole and p‐toluate ligands, leading to an infinite ribbon‐like double‐chain packing mode. The complete solid‐state structure can be described as a three‐dimensional supramolecular framework, stabilized by these intermolecular hydrogen‐bonding interactions and possible C—H...π interactions, as well as stacking interactions involving the 2‐(2‐pyridyl)benzimidazole ligands.     

4‐[4‐(Di­methyl­amino)­benzyl­idene­amino]‐3,5‐bis(2‐pyridyl)‐4H‐1,2,4‐triazole

The title compound, C₂₁H₁₉N₇, is a poly­pyridine ligand that is suitable for assembling complex metal systems capable of photoinduced electron transfer. The solid‐state structure has been determined at room temperature by single‐crystal X‐ray diffraction. The mol­ecule is not flat and both the bis­(pyridyl)­triazole and the benzyl­id­ene­amine fragments show significant distortions from planarity.     

2‐[(E)‐(4‐Hydroxy‐3‐methoxybenzylidene)amino]‐N‐(2‐methylphenyl)‐4,5,6,7‐tetrahydro‐1‐benzothiophene‐3‐carboxamide

The title compound, C₂₄H₂₄N₂O₃S, exhibits antifungal and antibacterial properties. The compound crystallizes with two molecules in the asymmetric unit, with one molecule exhibiting `orientational disorder' in the crystal structure with respect to the cyclohexene ring. The o‐toluidine groups in both molecules are noncoplanar with the respective cyclohexene‐fused thiophene ring. In both molecules, there is an intramolecular N—H...N hydrogen bond forming a pseudo‐six‐membered ring which locks the molecular conformation and eliminates conformational flexibility. The crystal structure is stabilized by O—H...O hydrogen bonds; both molecules in the asymmetric unit form independent chains, each such chain consisting of alternating `ordered' and `disordered' molecules in the crystal lattice.     

Racemic isopropyl 1,4‐dihydro‐2,6‐dimethyl‐4‐(6‐methyl‐2‐pyridyl)‐3‐nitropyridine‐5‐carboxylate hemi­benzene solvate

This analysis establishes the rotameric orientation of the pyridyl‐ring N atom of the title compound, C₁₇H₂₁N₃O₄·0.5C₆H₆, as antiperiplanar (ap) to the 1,4‐dihydropyridine H‐4, the absence of an intramolecular hydrogen bond between the 1,4‐dihydropyridine NH and the pyridyl‐N atom, and the unusual planarity of the 1,4‐dihydropyridine ring.     

A three‐dimensional homochiral metal–organic framework constructed from manganese(II) with S‐carboxymethyl‐N‐(p‐tosyl)‐l‐cysteine and 4,4′‐bipyridine

In the chiral polymeric title compound, poly[aqua(4,4′‐bipyridine)[μ₃‐S‐carboxylatomethyl‐N‐(p‐tosyl)‐l ‐cysteinato]manganese(II)], [Mn(C₁₂H₁₃NO₆S₂)(C₁₀H₈N₂)(H₂O)]_n, the Mn^II ion is coordinated in a distorted octahedral geometry by one water molecule, three carboxylate O atoms from three S‐carboxyatomethyl‐N‐(p‐tosyl)‐l ‐cysteinate (Ts‐cmc) ligands and two N atoms from two 4,4′‐bipyridine molecules. Each Ts‐cmc ligand behaves as a chiral μ₃‐linker connecting three Mn^II ions. The two‐dimensional frameworks thus formed are further connected by 4,4′‐bipyridine ligands into a three‐dimensional homochiral metal–organic framework. This is a rare case of a homochiral metal–organic framework with a flexible chiral ligand as linker, and this result demonstrates the important role of noncovalent interactions in stabilizing such assemblies.     

Metal‐Ion‐Mediated Tuning of Duplex DNA Binding by Bis(2‐(2‐pyridyl)‐1H‐benzimidazole)

Studies of double‐stranded‐DNA binding have been performed with three isomeric bis(2‐(n‐pyridyl)‐1H‐benzimidazole)s (n=2, 3, 4). Like the well‐known Hoechst 33258, which is a bisbenzimidazole compound, these three isomers bind to the minor groove of duplex DNA. DNA binding by the three isomers was investigated in the presence of the divalent metal ions Mg²⁺, Co²⁺, Ni²⁺, Cu²⁺, and Zn²⁺. Ligand–DNA interactions were probed with fluorescence and circular dichroism spectroscopy. These studies revealed that the binding of the 2‐pyridyl derivative to DNA is dramatically reduced in the presence of Co²⁺, Ni²⁺, and Cu²⁺ ions and is abolished completely at a ligand/metal‐cation ratio of 1:1. Control experiments done with the isomeric 3‐ and 4‐pyridyl derivatives showed that their binding to DNA is unaffected by the aforementioned transition‐metal ions. The ability of 2‐(2‐pyridyl)benzimidazole to chelate metal ions and the conformational changes of the ligand associated with ion chelation probably led to such unusual binding results for the ortho isomer. The addition of ethylenediaminetetraacetic acid (EDTA) reversed the effects completely.     

Hydrogen‐bonded networks in trans‐3‐(3‐pyridyl)acrylic acid and rctt‐3,3′‐(3,4‐dicarboxycyclobutane‐1,2‐diyl)dipyridinium dichloride

The structure of trans‐3‐(3‐pyridyl)acrylic acid, C₈H₇NO₂, (I), possesses a two‐dimensional hydrogen‐bonded array of supramolecular ribbons assembled via heterodimeric synthons between the pyridine and carboxyl groups. This compound is photoreactive in the solid state as a result of close contacts between the double bonds of neighbouring molecules [3.821 (1) Å] along the a axis. The crystal structure of the photoproduct, rctt‐3,3′‐(3,4‐dicarboxycyclobutane‐1,2‐diyl)dipyridinium dichloride, C₁₆H₁₆N₂O₄²⁺·2Cl⁻, (II), consists of a three‐dimensional hydrogen‐bonded network built from crosslinking of helical chains integrated by self‐assembly of dipyridinium cations and Cl⁻ anions via different O—H...Cl, C—H...Cl and N⁺—H...Cl hydrogen‐bond interactions.     

Copper(II) Complexes with N‐(9‐anthracenyl)‐N′‐(3‐pyridyl)urea (L) and a Derivative of L: Synthesis,Structure, and Fluorescent Properties

Three copper(II) complexes, [Cu₂(OAc)₄L₂] · 2CH₃OH ( 1 ), [CuBr₂L′₂(CH₃OH)] · CH₃OH ( 2a ), and [CuBr₂L′₂(DMSO)] · 0.5CH₃OH ( 2b ) {L = N‐(9‐anthracenyl)‐N′‐(3‐pyridyl)urea and L′ = N‐[10‐(10‐methoxy‐anthronyl)]‐N′‐(3‐pyridyl)urea} have been synthesized by the reaction of L with the corresponding copper(II) salts. Complex 1 shows a dinuclear structure with a conventional “paddlewheel” motif, in which four acetate units bridge the two Cu^II ions. In complexes 2a and 2b , the anthracenyl ligand L has been converted to an anthronyl derivative L′, and the central metal ion exhibits a distorted square pyramidal arrangement, with two pyridyl nitrogen atoms and two bromide ions defining the basal plane and the apical position is occupied by a solvent molecule (CH₃OH in 2a and DMSO in 2b ).     

(R)‐(6,6′‐Dihydroxybiphenyl‐2,2′‐diyl)bis(diphenylphosphine oxide) methanol solvate

The title compound, C₃₆H₂₈O₄P₂·CH₄O, was synthesized directly from the methoxy analogue. The crystal structure shows that one OH group interacts with an O atom of a phosphine oxide group in an adjacent mol­ecule, while the other OH group complexes with the methanol solvent molecule via intermolecular hydrogen bonds. An O atom of one phosphine oxide group interacts with the hydroxy H atom of methanol via a hydrogen bond. There are intra‐ and intermolecular π–π interactions between the phenyl rings. All these interactions result in the formation of supramolecular chiral parallelogram channels via self‐assembly.     

4‐Phenyl‐3,5‐bis(2‐pyridyl)‐4H‐1,2,4‐triazole

In the title compound, C₁₈H₁₃N₅, the two pyridyl rings form dihedral angles of 32.7 (2) and 30.1 (2)° with the triazole ring. The most favoured orientation of the pyridyl rings is that with their N atoms on opposite sides of the triazole ring directed towards the phenyl ring. π–π‐Stacking interactions involving pyridyl rings are observed along the a axis at a perpendicular distance of 3.670 (3) Å. This arrangement is further stabilized by weak intermolecular C—H?N hydrogen bonds.     

(±)‐1‐Methyl‐1,3,6‐triphenyl‐7‐(2‐phenyl­propen­yl)‐1,2‐dihydro­naphthalene

The crystal structure of the title compound, C₃₈H₃₂, presents a novel framework that combines the functionalities of a 1,6‐diarene‐substituted 1,2‐dihydro­naphthalene (DHN) with a 1,4‐distyrylbenzene (DSB) to form a crossed bis‐diarene. The lamellar crystal structure is held together by arene–arene inter­actions. While the orientations of the phenyl rings of the DSB units alternate within both the R and the S substructures, the homochiral substructures feature opposing polarity along the long axes of the DHN‐based diarenes.     

4,6‐Dimethyl‐2‐(3‐pyrid­yl)quinolin‐5‐amine

The title compound, C₁₆H₁₅N₃, shows a hindrance effect between adjacent amino and methyl groups that leads to a structural distortion, which is reflected in the non‐planarity of the quinoline entity and in the bond angles and distances. The crystal packing consists of chains along the b axis sustained by an inter­molecular hydrogen bond between the amino group and the N atom of the pyridyl ring.     

5‐Nitro‐2,3‐bis(2‐pyridyl)­quinoxaline

In the crystal structure of the title compound, C₁₈H₁₁N₅O₂, two crystallographically independent mol­ecules having the same composition and cis–cis conformation (arrangement of the pyridyl rings) are observed. A C—H⃛N hydrogen bond links the centrosymmetrically related mol­ecules into a discrete pair [C⃛N = 3.462 (4) Å], and the structure is stabilized further by π–π‐stacking interactions between aromatic rings from two adjacent dimers.