Protein Microarrays on Carboxymethylated Dextran Hydrogels: Immobilization, Characterization and Application

Tetraoctadecylammonium bromide (TOAB, (CH₃(CH₂)₁₇)₄N⁺Br^–) has been used to print temporary hydrophobic barriers on carboxymethylated dextran (CMD) hydrogels to create a generic platform for protein microarray applications. The primary reason for printing temporary hydrophobic barriers is to prevent cross-contamination and overflow during microdrop dispensing. Equally important is to eliminate the risk for non-specific binding to the barriers during analyte exposure. This has been accomplished by introducing a regeneration step that removes the barriers after ligand immobilization. The overall fabrication process was characterized by microscopic wetting, atomic force microscopy, imaging ellipsometry, fluorescence microscopy, surface plasmon microscopy and biospecific interaction analysis. A series of model proteins including transferrin, Protein A, anti-myoglobin and bovine serum albumin was spotted into the TOAB-defined areas under different experimental conditions, e.g. at increased humidity and reduced substrate temperature or with glycerol as an additive in the protein solution. Much emphasis was devoted to studies aiming at exploring the homogeneity and activity of the immobilized proteins. The printed barriers were removed after protein immobilization using tert-n-butyl alcohol (TBA). TBA was found to be a very efficient agent as compared to previously used salt regeneration solutions, and the regeneration time could be reduced from 30 to 10 minutes. Finally, the potential of using the well established CMD hydrogel chemistry as a platform for protein microarrays was exploited using surface plasmon microscopy.     

A case study on biological activity in a surface-bound multicomponent system: the biotin-streptavidin-peroxidase system

The adsorption of multiple protein layers on biotinylated organic surfaces has been characterized using surface plasmon resonance (SPR) and atomic force microscopy (AFM). Diffusion-limited loading of the biotinylated self-assembled monolayers (SAMs) ensures a precise control of the streptavidin surface density. For the subsequent interaction with biotinylated peroxidase, SPR data hint at a streptavidin density dependent orientation during peroxidase adsorption. Microcontact printed well-defined two-dimensional patterned surfaces of biotinylated organothiols and protein-resistant OEG-thiols allow an in-situ differentiation of specific and nonspecific adsorption (e.g., mono- vs multilayer adsorption). Additionally, the very important issue of biological activity of surface-bound enzymes is addressed by comparing the enzyme activities in solution with that for surface-bound species.     

Development of dextran-derivative arrays to identify physicochemical properties involved in biofouling from serum

To control protein adsorption on surfaces, low-fouling polymer coatings such as poly(ethylene oxide) (PEG or PEO) and polysaccharides are used. Their ability to resist protein adsorption is related to the layer structure, hence the immobilization mode. A polymer array technology was developed to study the structural diversity of carboxymethyl dextran (CMD) layers, whose immobilization conditions were varied. CMD arrays were analyzed by X-ray photoelectron spectroscopy (XPS) and by atomic force microscopy (AFM) colloidal probe force measurements. Serum protein adsorption was studied directly on the CMD arrays using surface plasmon resonance (SPR) microscopy. Physicochemical characterization revealed that pinning density regulates surface coverage and the amount of adsorbed molecules, and that salt concentration influences the surface structure of the charged polymer, forming extended or short layers. Protein adsorption experiments from serum showed that repulsive CMD layers are dense, with extended flexible chains. The present study underlines the usefulness of polymer arrays to study structural diversity of thin graft layers and to relate their physicochemical properties to their resistance to nonspecific protein adsorption.     

Photolithographic Patterning and Doping of Silica Xerogel Films

This study shows that conventional photolithography can be applied for patterning native or organic dye-doped silica films (0.5 m thick) obtained via a base-catalyzed sol-gel process. Photoresist was spin-coated onto high optical quality xerogel films, soft-baked, exposed to UV irradiation through a photomask, and developed with a commercial photoresist developing solution. Etching away of the photoresist-unprotected areas of the silica films was carried out with a dilute HF solution, while the remaining unexposed photoresist was removed with acetone. Interdigitated array patterns with features as small as 0.5 mm show a smooth surface and extremely sharp interfaces. Densification of the films at 550°C for 2 h decreases the film thickness by 11%, increases the refractive index from 1.420 to 1.456, and allows for well-defined patterning down to length scales of 10 m. Since the densification conditions are incompatible with organic dopants, it is demonstrated that sol-gel films can be doped after pattering (post-doping) by adsorption of cationic dyes from solution. Scanning electron microscopy reveals that the microstructure of patterned sol-gel films is similar to that of bulk monoliths, indicating that the photolithographic procedure is not harmful to the film quality. All patterned films demonstrate highly regular light diffraction patterns.     

Plasmonic detection and visualization of directed adsorption of charged single nanoparticles to patterned surfaces

It has recently been shown that surface plasmon microscopy (SPM) allows single nanoparticles (NPs) on sensor surfaces to be detected and analyzed. The authors have applied this technique to study the adsorption of single metallic and plastic NPs. Binding of gold NPs (40, 60 and 100 nm in size) and of 100 nm polystyrene NPs to gold surfaces modified by differently ω-functionalized alkyl thiols was studied first. Self-assembled monolayers (SAM) with varying terminal functions including amino, carboxy, oligo(ethylene glycol), methyl, or trimethylammonium groups were deposited on gold films to form surfaces possessing different charge and hydrophobicity. The affinity of NPs to these surfaces depends strongly on the type of coating. SAMs terminated with trimethylammonium groups and carboxy group display highly different affinity and therefore were preferred when creating patterned charged surfaces. Citrate-stabilized gold NPs and sulfate-terminated polystyrene NPs were used as negatively charged NPs, while branched polyethylenimine-coated silver NPs were used as positively charged NPs. It is shown that the charged patterned areas on the gold films are capable of selectively adsorbing oppositely charged NPs that can be detected and analyzed with an ~1 ng?mL^?1 detection limit.

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Graphical abstract Self-assembled monolayers of ω-functionalized alkyl thiols were deposited on a gold layer of a patterned sensor array. The charge-selective binding of single nanoparticles to such surfaces was registered by wide-field surface plasmon microscopy.

     

Adsorption/Desorption of Low-density Lipoprotein on a Heparinized Surface of Gold Sensors

Heparin has been considered to be a potentially useful ligand for low-density lipoprotein(LDL)detection and analysis in a clinical context.In order to construct an affinity surface for preferential ads...     

Corrosion Inhibition of Mild Steel by Safflower (Carthamus tinctorius) Extract: Polarization,EIS, AFM,SEM, EDS,and Artificial Neural Network Modeling

Inhibitory action of safflower (Carthamus tinctorius) extract (SE) was investigated in hydrochloric acid solution through electrochemical (polarization, EIS), and surface analysis (optical microscopy/atomic force microscopy (AFM)/scanning electron microscopy (SEM)/energy dispersive spectroscopy (EDS)) techniques. In addition, Inhibition efficiency was predicted by neural network (NN) modeling in elevated temperatures and different acid concentrations. The thermodynamic adsorption parameters propose that this inhibitor retard both cathodic and anodic processes through physical adsorption and blocking the active corrosion sites. Surface analysis techniques confirm the inhibitor adsorption on the metal surface, which is in accordance with the variation of apparent activation energy of corrosion. Finally, inhibition efficiency is discussed in terms of protective film formation.     

Fabrication of SPR Nanosensor Using Gold Nanoparticles and Self-Assembled Monolayer Technique for Detection of Cu2+ in an Aqueous Solution

In this work, we investigated the fabrication of surface plasmon resonance (SPR) nanosensor using gold nanoparticles (AuNPs) chemisorbed onto self assembled monolayer of 10-(3-amino phenoxy) decane-1-thiol on gold substrate. The fabrication process of SPR nanosensor was characterized using different techniques such as infrared reflection-absorption spectra (IRRAS), xX-ray photoelectron spectroscopy (XPS), and atomic force microscope (AFM). The fabricated SPR nanosensor was used for detection of Cu²⁺ in an aqueous solution using surface plasmon resonance refractometer. The results confirm the fabrication of new SPR nanosensor. The fabricated SPR nanosensor showed a good activity toward the detection of Cu²⁺. The detection of Cu²⁺ in an aqueous solution using the fabricated SPR nansensor was enhanced in the presence of gold nanoparticles.     

Metal Nanoparticles on Polymer Surfaces: 3. Adsorption Kinetics of Gold Hydrosol Particles on Polystyrene and Poly(2-vinylpyridine)

The adsorption of gold hydrosol nanoparticles on the surfaces of polystyrene and poly(2-vinylpyridine) was studied using two techniques, quartz crystal microgravimetry and atomic force microscopy. The resultant experimental data indicated that the kinetics of this process is controlled by the diffusion. The nanoparticle adsorption, up to rather high polymer surface coverages (35%), is irreversible.     

Design and preparation of imprinted surface plasmon resonance (SPR) nanosensor for detection of Zn(II) ions

A novel Zn(II) ions imprinted poly (2-hydroxyethyl Methacrylate-N-methacryloyl-(L)-histidine methyl ester) poly(HEMAH) surface plasmon resonance (SPR) nanosensor were designed for detection of Zn(II) ions in aqueous solution and artificial plasma providing a low cost, rapid and reliable results compared to other techniques such as atomic absorption spectroscopy, inductively coupled plasma-mass spectrometer, X-ray fluorescence with synchrotron radiation. Zn(II) ions imprinted nanofilm on the SPR chip surface was synthesized by bulk polymerization. Characterization of Zn(II) ions imprinted nanosensor was performed by contact angle measurement, atomic force microscopy (AFM), ellipsometry and Fourier transform infrared spectroscopy-attenuated total reflection (FTIR-ATR). Designed nanosensor was applied for selective detection of Zn(II) ions in aqueous solution within the range of 0.5–1.0?µg/mL. The limit of detection (LOD) and limit of quantification (LOQ) were calculated as 0.19 and 0.64?ng/mL, respectively. Association kinetics analysis, Scatchard, Langmuir, Freundlich, Langmuir–Freundlich, Tempkin and Dubinin-Radushkevich isotherms were analyzed to the experimental data in order to identify the adsorption behavior. The selectivity of the SPR nanosensor was examined by using competitive metal ions such as Cd(II), Cu(II), Pb(II), and Fe(II). To evaluate the imprinting effect of Zn(II) ions imprinted (MIP) and non-imprinted (NIP) nanosensor was also prepared as the control. Repeatability of the response signal was tested by four times adsorption–desorption–regeneration cycle.     

On the Role of Surface Forces in Contact Interaction between Elastic Sphere and Hard Surface

The works preformed earlier were reviewed briefly, and the new problem of the contact interaction between the elastic sphere and hard surface was formulated. The solution of a problem to the generalized surface force and its contact and noncontact components was obtained. The specific case of the obtained solution, when the separation = 0, was considered. The existence of two states of contact interaction between the elastic sphere and hard plane was revealed at = 0: (i) the stable state, at contact with the neck of radius a ₁= , where Ris the sphere radius, = (1 – )/(E), Eis the modulus of elasticity of the sphere, is its Poisson's coefficient, and () is the specific energy of adhesion of the surfaces at the lowest possible separation between these surfaces; and (ii) the unstable (metastable) state, at contact with radius a ₂= 0, i.e., at the point contact between the sphere and the plane. In this case, however, the stable contact with the neck at 0 when the modulus of elasticity E , i.e., at the interaction between the hard sphere and hard plane, is also degenerated into the point contact. It was shown that at the point contact, the contact component F _s ^"of the generalized surface force F _svanishes, whereas the noncontact component F _s ^"acquires the value F _s ^"= F _s= 2R() equal to the force of adhesion.     

Adsorption of polyacrylic acid on hydrophobic and hydrophilic surfaces

In this paper the adsorption of polyacrylic acid (MW=5000) on the hydrophobic mercury surface and on the hydrophilic -Al₂O₃ surface at pH=3–4 in 0.55 M sodium chloride solution was investigated. Measurements of change of the double layer capacitance by phase selective a.c. voltammetry were used for determination of the adsorption of polyacrylic acid on the mercury electrode. The same method was used for the determination of the polyacrylic acid remaining in the solution after the adsorption on hydrophilic particles (-Al₂O₃ particles). The results obtained for adsorption of polyacrylic acid were compared to the results of the adsorption of humic substance of similar molecular weight under similar experimental conditions. The study has shown that polyacrylic acid in acidic solution is strongly adsorbed on the mercury surface, which is comparable to the adsorption of humic substance on the mercury surface. At the same time, the adsorption/deposition of polyacrylic acid on the -Al₂O₃ surface is weaker compared to humic acid, indicating at a smaller degree of interaction of polyacrylic acid with aluminium ions and with hydrophilic surface.     

A novel biosensing interfacial design produced by assembling nano-Au particles on amine-terminated plasma-polymerized films

A novel biosensing interfacial design strategy has, for the first time, been produced by assembling nano-Au particles on amine-terminated plasma-polymerized films (PPF). A quartz-crystal microbalance (QCM) as a model transducer was deposited with PPF of n-butylamine by use of a glow discharge and then treated with nano-Au particles. The kinetic assembly process and conditions were studied using the real-time-output device and the surface topology of the resulting crystal was characterized by atomic force microscopy (AFM) imaging. Based on analysis of the experimental data, including the association constant of Au–amine interaction, the assembly mechanism is considered to be partly or even mainly chemical adsorption. Moreover, immobilization of anti-human IgM antibody (IgM Ab), as an example, on the developed PPF-Au interface was investigated. It was found that antibody molecules immobilized by the proposed procedure had higher immunological activity than those immobilized by the conventional glutaraldehyde (GLU) cross-linking procedure or the direct gold-attachment procedure. The newly developed sensor had a better response, with a detection limit of IgM concentration as low as ~1.00 g mL^–1. In particular, the extremely high stability of both PPF and nano-Au monolayer formulated allows the designed biosensing interface to withstand harsh regeneration treatment, making it reusable.     

Layer-by-layer electrostatic self-assembly of single-wall carbon nanotube polyelectrolytes

We have used anionic and cationic single-wall carbon nanotube polyelectrolytes (SWNT-PEs), prepared by the noncovalent adsorption of ionic naphthalene or pyrene derivatives on nanotube sidewalls, for the layer-by-layer self-assembly to prepare multilayers from carbon nanotubes with polycations, such as poly(diallyldimethylammonium) or poly(allylamine hydrochloride) (PDADMA or PAH, respectively), and polyanions (poly(styrenesulfonate), PSS). This is a general and powerful technique for the fabrication of thin carbon nanotube films of arbitrary composition and architecture and allows also an easy preparation of all-SWNT (SWNT/SWNT) multilayers. The multilayers were characterized with vis-near-IR spectroscopy, X-ray photoelectron spectroscopy (XPS), surface plasmon resonance (SPR) measurements, atomic force microscopy (AFM), and imaging ellipsometry. The charge compensation in multilayers is mainly intrinsic, which shows the electrostatic nature of the self-assembly process. The multilayer growth is linear after the initial layers, and in SWNT/polyelectrolyte films it can be greatly accelerated by increasing the ionic strength in the SWNT solution. However, SWNT/SWNT multilayers are much more inert to the effect of added electrolyte. In SWNT/SWNT multilayers, the adsorption results in the deposition of 1-3 theoretical nanotube monolayers per adsorbed layer, whereas the nominal SWNT layer thickness is 2-3 times higher in SWNT/polyelectrolyte films prepared with added electrolyte. AFM images show that the multilayers contain a random network of nanotube bundles lying on the surface. Flexible polyelectrolytes (e.g., PDADMA, PSS) probably surround the nanotubes and bind them together. On macroscopic scale, the surface roughness of the multilayers depends on the components and increases with the film thickness.     

A gas chromatographic assay for quantitative analysis of volatiles in solid materials by discontinuous gas extraction

Summary A method has been developed for the quantitative analysis of volatile compounds in solid samples. The method is based on a stepwise gas extraction of the volatiles with subsequent analysis of the extracted material and is termed discontinuous gas extraction. Any quantitative analysis requires an exhaustive extraction, which, however, is often too time-consuming for routine analysis. It is shown how the total amount of each volatile compound can be calculated from only a few extractions. Such a calculation is possible because for analytical purposes it is the information of the extraction process and not the extracted material that is needed. This method is useful for samples which are insoluble, such as certain polymers or residual solvents in printed foils, and which cannot be analyzed quantitatively by headspace gas chromatography, since no calibration solution can be prepared. It is further shown how discontinuous gas extraction can also be used to calibrate headspace analysis. Thus, both methods combine well together in that discontinuous gas extraction provides the accuracy while the headspace analysis gives convenience and speed of sample throughput, particularly if carried out with an automated headspace analyzer.     

In situ adsorption studies of a 14-amino acid leucine-lysine peptide onto hydrophobic polystyrene and hydrophilic silica surfaces using quartz crystal microbalance, atomic force microscopy, and sum frequency generation vibrational spectroscopy

The adsorption of a 14-amino acid amphiphilic peptide, LK14, which is composed of leucine (L, nonpolar) and lysine (K, charged), on hydrophobic polystyrene (PS) and hydrophilic silica (SiO2) was investigated in situ by quartz crystal microbalance (QCM), atomic force microscopy (AFM), and sum frequency generation (SFG) vibrational spectroscopy. The LK14 peptide, adsorbed from a pH 7.4 phosphate-buffered saline (PBS) solution, displayed very different coverage, surface roughness and friction, topography, and surface-induced orientation when adsorbed onto PS versus SiO2 surfaces. Real-time QCM adsorption data revealed that the peptide adsorbed onto hydrophobic PS through a fast (t < 2 min) process, while a much slower (t > 30 min) multistep adsorption and rearrangement occurred on the hydrophilic SiO2. AFM measurements showed different surface morphologies and friction coefficients for LK14 adsorbed on the two surfaces. Surface-specific SFG spectra indicate very different ordering of the adsorbed peptide on hydrophobic PS as compared to hydrophilic SiO2. At the LK14 solution/PS interface, CH resonances corresponding to the hydrophobic leucine side chains are evident. Conversely, only NH modes are observed at the peptide solution/SiO2 interface, indicating a different average molecular orientation on this hydrophilic surface. The surface-dependent difference in the molecular-scale peptide interaction at the solution/hydrophobic solid versus solution/hydrophilic solid interfaces (measured by SFG) is manifested as significantly different macromolecular-level adsorption properties on the two surfaces (determined via AFM and QCM experiments).     

Hydrodynamic thickness and deformational properties of adsorption layers of poly(ethyleneoxides)

From the measurements of surface potentials of quartz capillaries before and after adsorption of poly(ethylene oxides) (PEO) of various molecular mass, an assessment of the equilibrium hydrodynamic thickness of the adsorption layers has been obtained. The results have been compared with those of independent measurements of . The flow of the polymer solution under increasing pressure drops at the ends of a capillary, which causes the corresponding shear stress () on the surface of adsorbed PEO layers, results in the deformation of the latter, which manifests itself in decreasing 5. The values decrease by several times when the shear stress rises to 2×10₂ N m^–2. Such values of have been obtained using thin capillaries (r = 5÷6 mm) and by application of the capillary electrokinetic method with pressure drops up to 5÷6 MPa.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 31–37, January, 1994.     

Antigen binding forces of single antilysozyme Fv fragments explored by atomic force microscopy

We used atomic force microscopy (AFM) to explore the antigen binding forces of individual Fv fragments of antilysozyme antibodies (Fv). To detect single molecular recognition events, genetically engineered histidine-tagged Fv fragments were coupled onto AFM tips modified with mixed self-assembled monolayers (SAMs) of nitrilotriacetic acid- and tri(ethylene glycol)-terminated alkanethiols while lysozyme (Lyso) was covalently immobilized onto mixed SAMs of carboxyl- and hydroxyl-terminated alkanethiols. The quality of the functionalization procedure was validated using X-ray photoelectron spectroscopy (surface chemical composition), AFM imaging (surface morphology in aqueous solution), and surface plasmon resonance (SPR, specific binding in aqueous solution). AFM force-distance curves recorded at a loading rate of 5000 pN/s between Fv- and Lyso-modified surfaces yielded a distribution of unbinding forces composed of integer multiples of an elementary force quantum of approximately 50 pN that we attribute to the rupture of a single antibody-antigen pair. Injection of a solution containing free Lyso caused a dramatic reduction of adhesion probability, indicating that the measured 50 pN unbinding forces are due to the specific antibody-antigen interaction. To investigate the dynamics of the interaction, force-distance curves were recorded at various loading rates. Plots of unbinding force vs log(loading rate) revealed two distinct linear regimes with ascending slopes, indicating multiple barriers were present in the energy landscape. The kinetic off-rate constant of dissociation (k(off) approximately = 1 x 10(-3) s(-1)) obtained by extrapolating the data of the low-strength regime to zero force was in the range of the k(off) estimated by SPR.     

Patterning of 293T fibroblasts on a mica surface

Controllable cell growth on the defined areas of surfaces is important for potential applications in biosensor fabrication and tissue engineering. In this study, controllable cell growth was achieved by culturing 293 T fibroblast cells on a mica surface which had been patterned with collagen strips by a microcontact printing (μCP) technique. The collagen area was designed to support cell adhesion and the native mica surface was designed to repel cell adhesion. Consequently, the resulting cell patterns should follow the micro-patterns of the collagen. X-ray photoelectron spectroscopy (XPS), water contact angle (WCA) measurement, atomic-force microscope (AFM) observation, and force-curve measurement were used to monitor property changes before and after the collagen adsorption process. Further data showed that the patterned cells were of good viability and able to perform a gene-transfection experiment in vitro. This technique should be of potential applications in the fields of biosensor fabrication and tissue engineering. Figure Controllable cells growth has been achieved by culturing 293T fibroblast cells on the mica surface which had been patterned with collagen strips by microcontact printing (μCP) technique     

Adsorption and Corrosion Inhibition Behavior of Schiff Base-Based Cationic Gemini Surfactant on Mild Steel in Formic Acid

The adsorption and corrosion inhibition behavior of synthesized Schiff base-based cationic gemini surfactant bis[p-(N,N,N-tetradecyldimethylammonium bromide)benzylidene]thiourea (14-S-14) on mild steel in 20% formic acid in the temperature range of 30°C to 60°C was evaluated using weight loss measurements, solvent analysis of iron ions and potentiodynamic polarization measurements. The synthesized inhibitor was characterized using Fourier transform infrared spectroscopy (FTIR), nuclear magnetic resonance spectroscopy (NMR), and thin layer chromatography (TLC). The surface morphology of the corroded mild steel specimen was evaluated using scanning electron microscopy (SEM), energy dispersive x-ray analysis (EDAX), and atomic force microscopy (AFM). Thermodynamic/kinetic parameters were calculated to elaborate the adsorption and corrosion inhibition mechanism of the inhibitor. The inhibition efficiency of the compound was found to vary with inhibitor concentration, immersion time, and temperature. The adsorption of the compound on the steel surface was found to obey Langmuir adsorption isotherm.