Single-shot line scan imaging using stimulated echoes

A new high-speed MRI method is described for single-shot line scan imaging (LSI) based on stimulated echoes (STE). To allow for multislice imaging, the technique comprises a series of slice-selective preparation pulses (each corresponding to the first RF pulse of a STE sequence), a slab-selective refocusing pulse (second RF pulse), and multiple line-selective read pulses (third RF pulses). An alternative version employs packages of two slice-selective pulses followed by multiple line-selective read pulses. Experimental applications deal with human brain imaging on a clinical MRI system at 2.0 T. The technique offers user-selectable trade-offs between volume coverage (1-15 sections) and in-plane spatial resolution (1-5 mm linear pixel dimension) within total acquisition times of less than 500 ms. Although LSI yields a lower signal-to-noise ratio than Fourier imaging, single-shot LSI with STEs is free from resonance offset effects (e.g., magnetic field inhomogeneities and susceptibility differences) that are typical for echo-planar imaging. Moreover, the technique exhibits considerable robustness against motion and provides access to arbitrary fields-of-view, i.e., localized imaging of inner volumes without aliasing artifacts due to phase wrapping.     

3D MR microscopy with resolution 3.7 microm by 3.3 microm by 3.3 microm

The technique of magnetic resonance imaging microscopy holds promise of bringing the full capabilities of NMR to arbitrarily specified positions within spatially inhomogeneous systems, including biological cells, yet the possibilities are limited by the need for adequate sensitivity and spatial resolution. We report proton magnetic resonance images obtained by combining advances in receiver coil sensitivity, gradient strength, and pulse/gradient sequence design. We achieve resolution of 3.7 +/- 0.4 microm by 3.3 +/- 0.3 microm by 3.3 +/- 0.3 microm for a volume resolution approximately 40 femtoliters (corresponding to approximately 3 x 10(12) proton spins).     

Penetrating view of nano-structures in Aleochara verna spermatheca and flagellum by hard X-ray microscopy

A penetrating view of the three-dimensional nanostructure of female spermatheca and male flagellum in the species Aleochara verna is obtained with 100-nm resolution using a hard X-ray microscope, which provides a fast noninvasive imaging technology for insect morphology. Through introducing Zernike phase contrast and heavy metal staining, images taken at 8 keV displayed sufficient contrast for observing nanoscale fine structures, such as the spermatheca cochleate duct and the subapex of the flagellum, which have some implications for the study of the sperm transfer process and genital evolution in insects. This work shows that both the spatial resolution and the contrast characteristic of hard X-ray microscopy are quite promising for insect morphology studies and, particularly, provide an attractive alternative to the destructive techniques used for investigating internal soft tissues.     

A closer look into DESIRE for NMR microscopy

The major challenge of nuclear magnetic resonance (NMR) microscopy at a spatial resolution of a few micrometers is to obtain a sufficiently high signal-to-noise-ratio (SNR) within a reasonable measurement time. As a particular difficulty, molecular self-diffusion poses a serious limitation to true spatial resolution and SNR if conventional Fourier encoding techniques are used. Opposed to that, the alternative DESIRE (Diffusion Enhancement of SIgnal and REsolution) approach to NMR microscopy utilises diffusion to increase the SNR. Being a real-space imaging method, spatial localisation is accomplished by saturation pulses while diffusion continuously replaces the saturated by unsaturated spins. For this technique a signal enhancement of up to three orders of magnitude has been predicted and initial experimental data have provided a proof of principle. In the present work, a detailed investigation of one-dimensional (1D) DESIRE is presented including simulations of a real implementation of the method, a quantitative experimental analysis, and basic 1D imaging. The simulations reveal the importance and provide the means of ensuring the true spatial resolution for this particular way of localisation, enable the selection of useful experimental parameters, and predict the specific image contrast to be expected around barriers restricting diffusion. Experimental data are presented with resolutions down to 3 microm and DESIRE enhancement up to 25 that are in good agreement with the simulation results. In particular, 1D DESIRE imaging in a phantom confirms the expected signal drop close to barriers due to spatially restricted diffusion.     

A high-resolution phantom for MRI

Assessment of spatial resolution is an important step to test the performance of new sequence techniques-especially ultrafast techniques with dedicated k-space trajectories or interpolation algorithms. Measurement of the modulation transfer function (MTF) is a rather difficult procedure, but using suitable resolution phantoms allows a simple visual evaluation of spatial resolution.In contrast to commonly used test objects with a very restricted number of resolution patterns we developed a phantom containing resolution patterns from 0.1 to 1.5 mm in steps of 0.1 mm. One resolution pattern consists of five parallel Plexiglas strips with the distance of the strips being equal to their thickness. Together with a Plexiglas cuboid the resolution patterns are mounted on a Plexiglas plate on the bottom of the cylindrical phantom. An aqueous solution of manganese chloride is used to fill the phantom. High resolution cross sections (pixel size: 50 microm) through the resolution patterns were measured to confirm the correct dimensions of the phantom. To verify the appropriateness of the 0.1 and 0.2 mm stacks micro-CT images with a pixel size of 25 microm were acquired additionally for both patterns. Besides visual inspection evaluation of the profile function of signal intensity across the stacks demonstrates that the resolution patterns are sufficiently correct. T(1)-weighted SE sequences with slightly different pixel sizes as well as T(1)- and T(2*)- weighted gradient echo sequences were applied to demonstrate some possible applications of this phantom. In conclusion, the proposed phantom is well suited to assess the spatial resolution qualitatively (i.e., visually) and quantitatively over a wide range in steps of 0.1 mm.     

In vivo fluorescence microscopy of neuronal activity in three dimensions by use of voltage-sensitive dyes

We report in vivo imaging of neuronal electrical activity from superficial layers of the mouse barrel cortex. The measurements have approximately 16-microm spatial and 3-ms temporal resolution and reach depths of 150 microm below the cortical surface. The depth-dependent differential-fluorescence optical sections of activity are consistent with known cortical architecture and represent an important step toward in vivo measurement of functioning complex neural networks. Our observations employ a custom gradient-index lens probe and voltage-sensitive dye fluorescence; the use of epi-illumination rather than dark-field illumination provides the dramatic signal-to-noise improvement necessary for fast three-dimensional imaging.     

In vitro estimation of mean sound speed based on minimum average phase variance in medical ultrasound imaging

Effective receive beamforming in medical ultrasound imaging is important for enhancing spatial and contrast resolution. In current ultrasound receive beamforming, a constant sound speed (e.g., 1540 m/s) is assumed. However, the variations of sound speed in soft tissues could introduce phase distortions, leading to degradation in spatial and contrast resolution. This degradation becomes even more severe in imaging fatty tissues (e.g., breast) and with obese patients. In this paper, a mean sound speed estimation method where phase variance of radio-frequency channel data in the region of interest is evaluated is presented for improving spatial and contrast resolution. The proposed estimation method was validated by the Field II simulation and the tissue mimicking phantom experiments. In the simulation, the sound speed of the medium was set to 1450 m/s and the proposed method was capable of capturing this value correctly. From the phantom experiments, the −18-dB lateral resolution of the point target at 50 mm obtained with the estimated mean sound speed was improved by a factor of 1.3, i.e., from 3.9 mm to 2.9 mm. The proposed estimation method also provides an improvement of 0.4 in the contrast-to-noise ratio, i.e., from 2.4 to 2.8. These results indicate that the proposed mean sound speed estimation method could enhance the spatial and contrast resolution in the medical ultrasound imaging systems.     

In vivo three-dimensional photoacoustic tomography of a whole mouse head

An in vivo photoacoustic imaging system was designed and implemented to image the entire small animal head. A special scanning gantry was designed to enable in vivo imaging in coronal cross sections with high contrast and good spatial resolution for the first time to our knowledge. By use of a 2.25 MHz ultrasonic transducer with a 6 mm diameter active element, an in-plane radial resolution of approximately 312 microm was achieved. Deeply seated arterial and venous vessels in the head measuring up to 1.7 cm in diameter were simultaneously imaged in vivo with 804 nm wavelength laser excitation of photoacoustic waves.     

Phase-resolved optical coherence tomography and optical Doppler tomography for imaging blood flow in human skin with fast scanning speed and high velocity sensitivity

We have developed a novel phase-resolved optical coherence tomography (OCT) and optical Doppler tomography (ODT) system that uses phase information derived from a Hilbert transformation to image blood flow in human skin with fast scanning speed and high velocity sensitivity. Using the phase change between sequential scans to construct flow-velocity imaging, this technique decouples spatial resolution and velocity sensitivity in flow images and increases imaging speed by more than 2 orders of magnitude without compromising spatial resolution or velocity sensitivity. The minimum flow velocity that can be detected with an axial-line scanning speed of 400 Hz and an average phase change over eight sequential scans is as low as 10 microm/s, while a spatial resolution of 10 microm is maintained. Using this technique, we present what are to our knowledge the first phase-resolved OCT/ODT images of blood flow in human skin.     

MR imaging of flow with locally high spatial resolution.

Locally focused magnetic resonance imaging (LF MRI) allows imaging with variable spatial resolution within the field of view (FOV). Because LF MRI uses a priori information to provide locally high resolution in regions with rapid spatial variations in intensity (e.g., blood/tissue interface), it allows accurate reproduction of intense sharp edges in the specimen without blurring and truncation artifacts. This study employs LF MRI for 3D imaging of stationary and pulsatile flow. In the implemented version of LF MRI analytically defined basis functions are used to determine image intensity in regions depicted with low or high resolution. It is demonstrated that LF MRI of flow allows a significant (i.e. 3-4 times) reduction in scan time as compared to conventional FT MRI. It is also shown that LF images of pulsatile flow have a decreased appearance of ghosting artifacts as compared to the images reconstructed by using the conventional method.     

Spatial and temporal resolution effects on dynamic contrast-enhanced magnetic resonance mammography

We tested the hypothesis that partial volume effects due to poor in-plane resolution and/or low temporal resolution used in clinical dynamic contrast-enhanced magnetic resonance imaging results in erroneous diagnostic information based on inaccurate estimates of tumor contrast agent extravasation and tested whether reduced encoding techniques can correct for dynamic data volume averaging. Image spatial resolution was reduced from 469 x 469 microm2 to those reported below by selecting a subset of k-space data. We then compared the top five K(trans)/V(T) "hot spots" obtained from the original data set, 469 x 469-microm in-plane spatial resolution and an 18-s temporal resolution processed by fast Fourier transform (FFT), with values obtained from data sets having in-plane spatial resolutions of 938 x 938, 1875 x 1875 and 2500 x 2500 microm2 and a temporal resolution of 18 s, or data sets with temporal resolutions of 36, 54 and 72 and a spatial resolution of 469 x 469 microm2, and found them to statistically differ from the parent data sets. We then tested four different post processing methods for improving the spatial resolution without sacrificing temporal resolution: zero-filled FFT, keyhole, reduced-encoding imaging by generalized-series reconstruction (RIGR) and two-reference RIGR (TRIGR). The top five values of K(trans)/V(T) obtained from data sets, the in-plane spatial resolutions of which were improved to 469 x 469 microm2 by zero-filling FFT, Keyhole and RIGR, statistically differed from those obtained from the original 469 x 469 microm2 FFT parent image data set. Only the 938 x 938 and 1875 x 1875 microm2 data sets reconstructed to 469 x 469 microm2 with TRIGR reconstruction method yielded values of the top five K(trans)/V(T) hot spots statistically the same as the original parent data set, 469 x 469 microm2 in-plane spatial and 18-s temporal-resolution FFT. That is, partial volume effects from data sets of different in-plane spatial resolution resulted in statistically different values of the top five K(trans)/V(T) hot spots relative to a high spatial and temporal resolution data set, and TRIGR reconstruction of these low resolution data sets to high resolution images provided statistically similar values with a savings in temporal resolution of 2 to 4 times.     

Optical-resolution photoacoustic microscopy for in vivo imaging of single capillaries

Capillaries, the smallest blood vessels, are the distal end of the vasculature where oxygen and nutrients are exchanged between blood and tissue. Hence, noninvasive imaging of capillaries and function in vivo has long been desired as a window to studying fundamental physiology, such as neurovascular coupling. Existing imaging modalities cannot provide the required sensitivity and spatial resolution. We present in vivo imaging of the microvasculature including single capillaries in mice using optical-resolution photoacoustic microscopy (OR-PAM) developed in our laboratory. OR-PAM provides a lateral resolution of 5 microm and an imaging depth >0.7 mm.     

Improved functional mapping of the human amygdala using a standard functional magnetic resonance imaging sequence with simple modifications

As the amygdala is involved in various aspects of emotional processing, its characterization using neuroimaging modalities, such as functional magnetic resonance imaging (fMRI), is of great interest. However, in fMRI, the amygdala region suffers from susceptibility artifacts that are composed of signal dropouts and image distortions. Various technically demanding approaches to reduce these artifacts have been proposed, and most require alterations beyond a mere change of the acquisition parameters and cannot be easily implemented by the user without changing the MR sequence code. In the present study, we therefore evaluated the impact of simple alterations of the acquisition parameters of a standard gradient-echo echo-planar imaging technique at 3 T composed of echo times (TEs) of 27 and 36 ms as well as section thicknesses of 2 and 4 mm while retaining a section orientation parallel to the intercommissural plane and an in-plane resolution of 2x2 mm(2). In contrast to previous studies, we based our evaluation on the resulting activation maps using an emotional stimulation paradigm rather than on MR raw image quality only. Furthermore, we tested the effects of spatial smoothing of the functional raw data in the course of postprocessing using spatial filters of 4 and 8 mm. Regarding MR raw image quality, a TE of 27 ms and 2-mm sections resulted in the least susceptibility artifacts in the anteromedial aspect of the temporal lobe. The emotional stimulation paradigm resulted in robust bilateral amygdala activation for the approaches with 2-mm sections only -- but with larger activation volumes for a TE of 36 ms as compared with that of 27 ms. Moderate smoothing with a 4-mm spatial filter represented a good compromise between increased sensitivity and preserved specificity. In summary, we showed that rather than applying advanced modifications of the MR sequence, a simple increase in spatial resolution (i.e., the reduction of section thickness) is sufficient to improve the detectability of amygdala activation.     

Photolithographic production of glass sample holders for improved sensitivity and resolution in ESR microscopy

Electron spin resonance microscopy (ESRM) is an imaging method aiming at the observation of stable free radicals in small samples with a spatial resolution of about 1 micrometer. One of the challenges associated with the useof ESRM in conjunction with small biological samples (e.g., single cells) is containing these samples in a manner that will minimize the effect on the quality factor of the resonator but yet enable easy handling and simultaneous optical and ESR observation. Here we present a new type of flat samples that provide an adequate answer to this challenge. The samples are made of thin glass coverslips, manufactured by photolithography techniques. Details of the manufacturing process as well as the expected improvements in sensitivity and resolution are provided.     

Imaging biological specimens with the confocal scanning laser microscope/macroscope

A new confocal scanning laser microscope/macroscope (cslm/M) has recently been developed. It combines in one instrument the high resolution capability of a confocal scanning beam microscope for imaging small specimens, with good resolution confocal imaging of macroscopic specimens. Some of its main features include: (a) 0.25 μm lateral resolution in the microscope mode and 5 μm lateral resolution in the macroscope mode; (b) a field of view that can vary from 25 μm × 25 μm to 75,000 μm × 75,000 μm; (c) capability for acquiring large data sets from 512 × 512 pixels to 2048 × 2048 pixels; (d) 0.5 μm depth resolution in the microscope mode and 200 μm depth resolution in the macroscope mode.

In this work the cslm/M was used to image whole biological specimens (> 5 m diameter), including insects which are ideal specimens for the macroscope. Specimens require no preparation, unlike scanning electron microscope (SEM) specimens which require a conductive coating. The specimens described in this paper are too large to be imaged in their entirety by a scanning beam laser microscope, however they can be imaged by slower scanning stage microscopes. In the macroscope mode the cslm/M was used to acquire a large number (e.g. 20–40) of confocal image slices which were then used to reconstruct a three-dimensional image of the specimen. High resolution images were collected by the cslm/M by switching to the microscope mode where high numerical aperture (NA) objectives were used to image a small area of interest. Reflected-light and fluorescence images of plant and insect specimens are presented which demonstrate the morphological details obtained in various imaging modes. A process for three-dimensional visualization of the data is described and images are shown.     

Magnetic resonance imaging of isolated single liposome by magnetic resonance force microscopy

Magnetic resonance imaging (MRI) is very useful spectroscopy to visualize a three-dimensional (3D) real structure inside the sample without physical destruction. The spatial resolution of the readily available MRI spectrometer is, however, limited by a few ten to hundreds of microns due to a technological boundary of generating larger magnetic field gradient and to the insensitivity inherent to the inductive signal detection. Magnetic resonance force microscopy (MRFM) is new alternative MRI spectroscopy which is anticipated to significantly surpass the conventional MRI in both resolution and sensitivity. We report two imaging experiments on our MRFM spectrometer operated at room temperature and in vacuum approximately 10(-3)Pa. One is for approximately 20 microm liposome membrane labeled entirely by a nitroxide imaging agent and the other for approximately 15 microm DPPH particles, both are nearly the same size as that of human cell. The reconstructed images at spatial resolution approximately 1 microm were in satisfactory agreement with the scanning electron microscope images. The potential capability of visualizing intrinsic radicals in the cell is suggested to investigate redox process from a microscopic point of view.     

High resolution electron spin resonance microscopy

NMR microscopy is routinely employed in fields of science such as biology, botany, and materials science to observe magnetic parameters and transport phenomena in small scale structures. Despite extensive efforts, the resolution of this method is limited (>10 microm for short acquisition times), and thus cannot answer many key questions in these fields. We show, through theoretical prediction and initial experiments, that ESR microscopy, although much less developed, can improve upon the resolution limits of NMR, and successfully undertake the 1 mum resolution challenge. Our theoretical predictions demonstrate that existing ESR technology, along with advanced imaging probe design (resonator and gradient coils), using solutions of narrow linewidth radicals (the trityl family), should yield 64 x 64 pixels 2D images (with z slice selection) with a resolution of 1 x 1 x 10 microm at approximately 60 GHz in less than 1h of acquisition. Our initial imaging results, conducted by CW ESR at X-band, support these theoretical predictions and already improve upon the previously reported state-of-the-art for 2D ESR image resolution achieving approximately 10 x 10 mum, in just several minutes of acquisition time. We analyze how future progress, which includes improved resonators, increased frequency of measurement, and advanced pulsed techniques, should achieve the goal of micron resolution.     

EUV波段电光成像系统分辨率的实验研究

基于微通道板 (MicrochannelPlate ,MCP)探测器件设计一套成像系统 ,用于对极紫外 (ExtremeUl traviolet,EUV)波段的光进行成像。结果在 13,17 1,19 5和 30 4nm处获得了一个宽度为 3mm的狭缝的像 ,其相应的空间分辨率分别为 85 ,12 0 ,182和 4 95 μm ,最佳为 85 μm ,对应波长 13nm ,而且波长越短 ,分辨率越高 ,图像的亮度也越高。     

Bessel beam spectral-domain high-resolution optical coherence tomography with micro-optic axicon providing extended focusing range

Endoscopic imaging in tubular structures, such as the tracheobronchial tree, could benefit from imaging optics with an extended depth of focus (DOF) to accommodate the varying sizes of tubular structures across patients and along the tree within the same patient. Yet the extended DOF needs to be accomplished without sacrificing resolution while maintaining sufficient sensitivity and speed of imaging. In this Letter, we report on the measured resolution and sensitivity achieved with a custom-made micro-optic axicon lens designed to theoretically achieve an 8 mm DOF. A measured invariant resolution of approximately 8 microm is demonstrated across a 4 mm measured DOF using the micro-optic axicon while achieving an invariant sensitivity of approximately 80 dB with a 25 mW input power. Double-pass Bessel beam spectral-domain optical coherence tomography with an axicon micro-optic lens (i.e., <1 mm in diameter) is, for the first time to our knowledge, demonstrated in a biological sample demonstrating invariant resolution and signal-to-noise ratio across a 4 mm measured DOF, which is compared to Gaussian beam imaging.