cis-Palladium(II) complexes of derivatives of di-(2-pyridyl)methane: Study of the influence of the bridge group in the coordination mode

Palladium(II) complexes containing di-(2-pyridyl)-N-methylimine (1), di-(2-pyridyl)methanol (2) and di-(2-pyridyl)methyl-N,N-diethyldithiocarbamate (4) ligands were synthesized and characterized by ¹H and ¹³C NMR in solution, IR and X-ray single crystal diffraction. Crystal structures of cis-dichloro[di-(2-pyridyl)-N-methylimine]palladium(II) (5), cis-dichloro[di-(2-pyridyl)methanol]palladium(II) (6) and cis-dichloro[di-(2-pyridyl)methyl-N,N-diethyldithiocarbamate]palladium(II) (7) showed a bidentate coordination mode of the di-(2-pyridyl)methane derivatives 1, 2 and 4. In these complexes is observed the formation of a five-membered chelate ring with the iminic ligand 1 and six-membered chelate rings with the pyridinic ligands 2 and 4. In all complexes the palladium atom displays a distorted square planar geometry.     

Synthesis and characterization of some novel cadmium(II) complexes with 3-hydroxypicolinic acid (3-OHpicH): Crystal and molecular structures of [CdI(3-OHpic)(3-OHpicH)(H2O)]2, [Cd(3-OHpic)2(H2O)2] and [Cd(3-OHpic)2]n

Cadmium(II) complexes of 3-hydroxypicolinic acid, namely [CdI(3-OHpic)(3-OHpicH)(H₂O)]₂ (1), [Cd(3-OHpic)₂(H₂O)₂] (2) and [Cd(3-OHpic)₂]_n (3) were prepared and characterized by spectroscopic methods (IR, NMR) and their molecular and crystal structures were determined by X-ray crystal structure analysis. Complexes 1 and 2 were prepared in similar reaction conditions using different cadmium(II) salts: cadmium(II) iodide and cadmium(II) acetate dihydrate, respectively, while 3 was prepared by recrystallization of 2 from N,N-dimethylformamide solution. Various coordination modes of 3-OHpicH in 1–3 were established in the solid state: bidentate N,O-chelated mode in 1 and 2, monodentate mode through the carboxylate O atom from zwitterionic ligand in 1 and bidentate N,O-chelated and bridging mode in 3. In the DMF solution of all prepared complexes, only monodentate mode of 3-OHpicH binding to cadmium(II) through the carboxylate O atom was established by ¹H, ¹³C, ¹⁵N and ¹¹³Cd NMR spectroscopy.     

The synthesis, spectroscopic properties and X-ray structure of Zn(II) complexes with amino derivatives of chromone

Three new Zn(II) complexes containing the ligands 5-amino-8-methyl-4H-chromen-4-one (1), 6- or 7-amino-2-phenyl-4H-chromen-4-one (2, 3) were prepared. The new synthesised compounds were characterised by IR, ¹H NMR and MS spectroscopy. The crystal structure of complex 4 was determined with the use X-ray diffraction. The Zn(II) centre of 4 is linked by two chlorido and two N-bound aminochromone ligands, 1, in a strongly distorted tetrahedral configuration with the dissymetric point group C₂. The protonation constants of the ligands 1, 2 and 3 corresponded to 3.68, 3.88 and 6.83, respectively. The stability constants of the Zn(II) complexes were calculated from the potentiometric titration data. The complexes were found to have the formulae ML and ML₂ for ligands 1 and 2, and ML for ligand 3. Fluorescence spectroscopic properties were also studied; the strongest fluorescence in solution was exhibited by complex 6.     

ClickEnam. 1. Synthesis of novel 1,4-disubsituted-[1,2,3]-triazole-derived β-aminovinyl trifluoromethylated ketones and their copper(II) complexes

The copper(I) catalyzed cycloaddition reaction of N-Boc propargyl amine (dipolarophile) 1 with benzyl azide (1,3-dipole) 2 was found to proceed smoothly in t-BuOH/H₂O at room temperature, to furnish the corresponding 1,4-disubstituted-[1,2,3]-triazole-derived N-Boc amine 3 in good yield. Deprotection of 3 with trifluoroacetic acid and addition of the trifluoroacetate salt 4 in the presence of triethylamine, with a series of methoxyvinyl(trifluoromethyl)ketones 10-14, gave the corresponding β-aminovinyl trifluoromethylated ketones 15-19 in moderate to good yields. Two copper(II) complexes, one monomer and one dimer with chlorine double bridge, 20 and 21, respectively, were also prepared and their crystal structure determined. β-Aminovinyl trifluoromethylated ketones 15-17 and complexes 20 and 21 have been screened as potential antifungal agents and the antimalarial activity of 15 and 16 were tested against two Plasmodium falciparum strains (3D7 and W2).     

Anion directed templated synthesis of mono- and di-Schiff base complexes of Ni(II)

Two sets of Schiff base ligands, set-1 and set-2 have been prepared by mixing the respective diamine (1,2-propanediamine or 1,3-propanediamine) and carbonyl compounds (2-acetylpyridine or pyridine-2-carboxaldehyde) in 1:1 and 1:2 ratios, respectively and employed for the synthesis of complexes with Ni(II) perchlorate and Ni(II) thiocyanate. Ni(II) perchlorate yields the complexes having general formula [NiL₂](ClO₄)₂ (L = L¹ [N¹-(1-pyridin-2-yl-ethylidine)-propane-1,3-diamine] for complex 1, L² [N¹-pyridine-2-ylmethylene-propane-1,3-diamine] for complex 2 or L³ [N¹-(1-pyridine-2-yl-ethylidine)-propane-1,2-diamine] for complex 3) in which the Schiff bases are mono-condensed terdentate whereas Ni(II) thiocyanate results in the formation of tetradentate Schiff base complexes, [NiL](SCN)₂ (L = L⁴ [N,N′-bis-(1-pyridine-2-yl-ethylidine)-propane-1,3-diamine] for complex 4, L⁵ [N,N′-bis(pyridine-2-ylmethyline)-propane-1,3-diamine] for complex 5 or L⁶ [N,N′-bis-(1-pyridine-2-yl-ethylidine)-propane-1,2-diamine] for complex 6) irrespective of the sets of ligands used. Formation of the complexes has been explained by anion modulation of cation templating effect. All the complexes have been characterized by elemental analyses, spectral and electrochemical results. Single crystal X-ray diffraction studies confirm the structures of four representative members, 1, 3, 4 and 5; all of them have distorted octahedral geometry around Ni(II). The bis-complexes of terdentate ligands, 1 and 3 are the mer isomers and the complexes of tetradentate ligands, 4 and 5 possess trans geometry.     

Synthesis, structure, and magnetic properties of two 1-D helical coordination polymeric Cu(II) complexes

Two helical coordination polymeric copper(II) complexes bearing amino acid Schiff bases HL or HL′, which are condensed from 2-hydroxy-1-naphthaldehyde with 2-aminobenzoic acid or l-valine, respectively, have been prepared and characterised by X-ray crystallography. In [CuL]_n (1) the copper(II) atoms are bridged by syn-anti carboxylate groups giving infinite 1-D right-handed helical chains which are further connected by weak C-H?Cu interactions to build a 2-D network. While in [CuL′]_n (2) the carboxylate group acts as a rare monatomic bridge to connect the adjacent copper(II) atoms leading to the formation of a left-handed helical chain. Magnetic susceptibility measurements indicate that 1 exhibits weak ferromagnetic interactions whereas an antiferromagnetic coupling is established for 2. The magnetic behavior can be satisfactorily explained on the basis of the structural data.     

Synthesis and X-ray structure of platinum(II), palladium(II) and copper(II) complexes with pyridine–pyrazole ligands: Influence of ligands’ structure on cytotoxic activity

The new pyrazole ligand 5-(2-hydroxyphenyl)-3-methyl-1-(2-pyridylo)-1H-pyrazole-4-phosphonic acid dimethyl ester (2a) has been used to obtain a series of platinum(II), palladium(II) and copper(II) complexes (3a–7a) as potential anticancer compounds. The molecular structures of the platinum(II) and copper(II) complexes 3a and 6a have been determined by X-ray crystallography. The cytotoxicity of the phosphonic ligand 2a and its carboxylic analog 2b as well as their complexes has been evaluated on leukemia and melanoma cell lines. Copper(II) complexes were found to be more efficient in the induction of melanoma cell death than the platinum(II) or palladium(II) complexes. Cytotoxic effectiveness of compound 7b against melanoma WM-115 cells was two times better than that of cisplatin. The reaction of compound 5b with 9-methylguanine has been studied.     

Synthesis, characterization, antibacterial and cytotoxic activity of new palladium(II) complexes with dithiocarbamate ligands: X-ray structure of bis(dibenzyl-1-S:S′-dithiocarbamato)Pd(II)

Six palladium(II) dithiocarbamates of general formula Pd(AmDTC)₂, where HAmDTC = aminedithiocarbamic acid, [Pd(II) piperidinedithiocarbamate (1), Pd(II) 4-methylpiperidinedithiocarbamate (2), Pd(II) N-methylbenzyldithiocarbamate (3), Pd(II) dibenzyldithiocarbamate (4), Pd(II) dicyclohexyldithiocarbamate (5), Pd(II) N-cyclohexyl-N-methyldithiocarbamate (6)] have been synthesized and characterized by elemental analyses, FT-IR, ¹H and ¹³C NMR. The X-ray structure of Pd(II), compounds 3 and 4, showed that the ligands are chelated by both sulfur atoms with bond angles S1-Pd-S4 = 179.24(2)° and S2-Pd-S3 = 179.09(5)°, with a distorted square planar geometry around Pd. All these complexes were screened for cytotoxic and antibacterial effects and showed significant antibacterial activity and no substantial in vitro cytotoxicity indicating specificity of the compounds.     

Studies directed toward the synthesis of protein-bound GPI anchor

Mannobioside-linked phosphoethanolamine 10, a prototype model of the GPI anchor, was synthesized via glycosidation of the monosaccharide donor and acceptor, and subsequent phosphorylation. In order to test the reactivity of the amino group involved in 10 against the activated amino acid esters, 10 was reacted with N-protected amino acid pentafluorophenyl esters in the presence of HOBt. The reactions gave the aminoacylated products in moderate yields. When Fmoc-Ser-OPfp 12 and Fmoc-Cys(SBu^t)-OPfp 14 were reacted with 10, byproducts 19, 20 and 21 derived from N- and O-acylation were produced. In contrast, reactions of 10 and N-protected amino acid thioesters were promoted with AgNO₃, HOSu, and DIEA to afford the coupling products without the undesired O-acylation. Peptidylation of 10 with the synthesized oligopeptide thioesters 24 and 27 was also successful under the segment coupling conditions of the peptide thioester method as well as those of the native chemical ligation.     

Synthesis and characterization of iron and cobalt dichloride bearing 2-quinoxalinyl-6-iminopyridines and their catalytic behavior toward ethylene reactivity

The 1-(6-(quinoxalin-2-yl)pyridin-2-yl)ethanone was synthesized in order to prepare a series of N-(1-(6-(quinoxalin-2-yl)pyridine-2-yl)ethylidene)benzenamines (L1-L7), which provided new alternative N^∧N^∧N tridentate ligands coordinating with iron(II) and cobalt(II) dichloride to form complexes of general formula LFeCl₂ (1-7) and LCoCl₂ (8-14). All organic compounds were fully characterized by NMR, IR spectroscopic and elemental analysis along with and magnetic susceptibilities and metal complexes were examined by IR spectroscopic and elemental analysis, while their molecular structures (L1, L4, 1, 4, 10, 13) were confirmed by single crystal X-ray diffraction analysis. Upon activation with methylaluminoxane (MAO), all iron complexes gave good catalytic activities for ethylene reactivity (oligomerization and polymerization), while their cobalt analogues showed moderate activities toward ethylene oligomerization with modified methylaluminoxane (MMAO). Various reaction parameters were investigated for better catalytic activities, the higher activities were observed at elevated ethylene pressure. The iron and cobalt complexes with para-methyl substituents of aryl group linked on imino group showed highest activity.     

Synthesis of (S)-, (R)-, and (rac)-2-amino-3,3-bis(4-fluorophenyl)propanoic acids and an evaluation of the DPP IV inhibitory activity of Denagliptin diastereomers

The non-proteinogenic amino acid (2S)-2-amino-3,3-bis(4-fluorophenyl)propanoic acid [(S)-1] is a key intermediate required for the synthesis of Denagliptin (2a). Denagliptin is a dipeptidyl peptidase IV (DPP IV) inhibitor that is being developed for the treatment of type-2 diabetes mellitus. A diastereoselective, cost-efficient synthetic procedure for (S)-1 was developed by alkylating a Ni(II) glycine equivalent derived from (S)-2-[(N-benzylprolyl) amino] benzophenone [(S)-BPB]. The alkylated product was then decomposed to isolate the target amino acid (S)-1 (ee >99%) and ligand (S)-BPB, which can be reused in subsequent reactions. The enantiomer (R)-1 and racemate (rac)-1 were synthesized from their corresponding Ni(II) glycine equivalents. Denagliptin diastereomers (2), derived from the key intermediates (S)-1, (R)-1, and (rac)-1 were synthesized, and their dipeptidyl peptidase IV inhibitory activities were investigated. These findings are important in the design and synthesis of DPP IV inhibitors.     

A simple approach for the synthesis of new classes of dithiocarbamate-linked peptidomimetics

An efficient protocol for the synthesis of a new series of dithiocarbamate-linked peptidomimetics is described. The in situ generated dithiocarbamic acid intermediate formed by the reaction of an amino acid ester and carbon disulfide in the presence of triethylamine was treated with N-protected amino alkyl iodide to afford title compounds 3a-g in good to moderate yields. The synthesis of N-Fmoc-protected tripeptidomimetics 4a-e containing two dithiocarbamate linkages is also described. The protocol was further extended to synthesize N,N′-orthogonally protected dithiocarbamate-linked dipeptidomimetics 7a-c as well. The mild reaction conditions and non-toxic reagents are the advantages of the present method.     

Synthesis and crystal structure of three new copper(II) complexes with a tridentate amine and its Schiff bases

Three new mononuclear complexes of copper(II), viz. [Cu(L)(N₃)Cl] (1), [Cu(L′)(H₂O)]ClO₄ (2) and [Cu(L″)] (3) where L = N-(3-aminopropyl)-N-methylpropane-1,3-diamine, L′ = 2-(N-{3-[(3-aminopropyl)(methyl)amino]propyl}ethanimidoyl)phenolate ion and L″ = 2,2′-{(methylimino)bis[propane-3,1-diylnitrilo(1E)eth-1-yl-1-ylidene]}diphenolate ion, have been prepared. The synthesis of complex 1 has been achieved by reacting copper chloride with the triamine (L) and sodium azide in a 1:1:1 M ratio. The other two compounds have been synthesized by the reaction of copper perchlorate with the same triamine, L, plus 2-hydroxyacetophenone in a molar ratio of 1:1:1 (for 2) and 1:1:2 (for 3), so that the respective tetradentate and pentadentate Schiff bases HL′ and H₂L″ are formed in situ to bind the copper(II) ions. The complexes have been characterized by microanalytical, spectroscopic and single crystal X-ray diffraction studies. Structural studies reveal that the mononuclear units of all the three complexes adopt a distorted square pyramidal geometry and are held together by either intermolecular H-bonding (in 1 and 2) or C-H?π interactions (in 3) to form supramolecular networks in the solid state.     

ESR and pH-potentiometric study of the mixed-ligand complex formation in the copper(II)-4-fluorosalicylic acid-N,N-diethylnicotinamide system: Structure and spectral properties of [Cu(4-fluorosalicylate)2(N,N-diethylnicotinamide)2(H2O)2] complex

EPR simulation method together with pH-potentiometry combined with UV-Vis spectrophotometry were used for the study of the ternary system 4-fuorosalicylic acid (HA)-N,N-diethylnicotinamide (B)-copper(II) in aqueous solution. The N,N-diethylnicotinamide ligand is a weak donor, its mixed-ligand complexes with 4-fluorosalicylate anions are more favoured. The number of coordinated N,N-diethylnicotinamide molecules increases with decreasing temperature: up to four ones were detected in the coordination sphere of copper(II) in frozen solutions. The formation of [CuH₋₁AB₂] and [CuH₋₁A] was detected by all methods at neutral pH. At lower pH values, [CuA₂B₂] and [CuB] become dominant, and this fact is in good agreement with [CuA₂B₂(H₂O)₂] crystals obtained from similar solutions. The structural unit of the [CuA₂B₂(H₂O)₂] complex consists of a copper(II) ion, which is monodentately coordinated by a pair of 4-fluorosalicylate anions and by a pair of N,N-diethylnicotinamide in trans positions in the basal plane, and by two water molecules in the axial positions of a tetragonal bipyramid.     

Syntheses of aryl- and arylethynyl-substituted N-confused porphyrins

Palladium-catalyzed cross-coupling reactions under Suzuki, Sonogashira, and Stille conditions afford 3-aryl (9-12) and 3-arylethynyl N-confused porphyrin (NCP) silver(III) complexes (13-15) from the 3-bromo NCP complex (4) in ca. 70% yields along with the transmetalated products, 3-substituted NCP palladium(II) complexes (11-Pd to 15-Pd), in 10-30% yields. Substitution at 3-position was confirmed by the single crystal X-ray structures of 9, 13-Ag, and 13-Pd. The arylethynyl groups or five-membered heterocyclic aromatic rings at 3-position largely affected the optical properties of N-confused porphyrin, in which the longest absorption maxima of the Q-bands are shifted bathochromically by 30-120 nm. The electronic effect of substituent differs largely between palladium and silver complexes reflecting the different π-electron delocalization pathway of NCP cores. 3-Aryl- and 3-arylethynyl NCP silver(III) complexes were easily demetalated to afford the corresponding free base porphyrins by the treatment of sodium borohydride.     

Highly enantioselective fluorescent recognition of amino acid derivatives by unsymmetrical salan sensors

Novel unsymmetrical salan fluorescent sensors 2a and 2b have been designed and synthesized. The chiral recognition of N-Boc-protected amino acids by 2a and 2b has been investigated. Sensor 2a possesses higher sensitivity and enantioselectivity than sensor 2b does. Job analysis and nonlinear regression results show that 2a can form a 1:1 stoichiometric complex with a N-Boc-protected amino acid. The obtained response selectivities and the association constants indicate that 2a is a highly enantioselective and sensitive fluorescent sensor toward N-Boc-protected amino acids.     

A clay-mediated, regioselective synthesis of 2-(aryl/alkyl)amino-thiazolo[4,5-c]carbazoles

The 3-aminocarbazoles 1a-e were condensed with phenyl and benzyl isothiocyanates on montmorillonite K10 clay or TLC-grade silica gel at room temperature to furnish efficiently the N-phenyl and N-benzylthioureidocarbazoles, 2a-e and 2f, respectively, within minutes. When adsorbed on montmorillonite K10 clay impregnated with para-toluene sulfonic acid (1:1, w/w) and heated at 60-70 °C, 2a-e and 2f furnished the 2-anilino and 2-benzylaminothiazolo[4,5-c]carbazoles, 3a-e and 3f, respectively, regioselectively in high yields. The cyclisation was also effective for the N-methylthioureidocarbazoles 2g-i.     

Nickel(II) complexes of the type [RM(oxam)MR] (oxam: oxalamidinate, R=n-butyl, n-hexyl): the first binuclear n-alkyl nickel complexes

The reaction between one equivalent of [(acac)Ni(A)Ni(acac)] (A: N¹,N²-bis(2-pyridylmethyl)-N³,N⁴-bis-(2,4,6-trimethylphenyl)oxalamidinate) and two equivalents of R-Li (R=n-butyl; n-hexyl) results in the formation of the binuclear complexes [(R-Ni)(A)(Ni-R)] (1: R=n-butyl: 2=n-hexyl). Both compounds were characterized by ¹H- and ¹³C-NMR spectroscopy, elemental analysis, and mass spectroscopy. X-ray single diffraction studies of single crystals of 1 and 2 show that symmetrical binuclear complexes are formed in which the two Ni(II) centers are connected by the oxalamidinato bridging ligand A in a planar-square environment. No agostic interactions between the β-hydrogens of the n-alkyl groups and the metal centers were observed. DTA- and DTG-investigations show, that 1 and 2 are surprisingly thermally stable (decomposition temperature of 1: 188 °C under formation of butenes). Heating up a 1:1 mixture of 1 and 2 in toluene results in the formation of octane, decane and dodecane indicating an intermolecular transfer reaction of the n-alkyl-groups in solution. CV measurements display that the oxam complexes [(R-M)(A)(M-R)] (M=Ni, R=CH₃ (3), Ph (4), CCH (6), CCPh (7); M=Pd, R=CH₃ (5) are reversibly reduced in two steps indicating electronic interactions between the two metal centers.     

Syntheses and catalytic activities of Pd(II) dicarbene and hetero-dicarbene complexes

A series of palladium(II) complexes (1-6) bearing cis-chelating homo-dicarbene ligands with varying alkyl bridges (C1-C3) and N-heterocyclic backbones (imidazole and benzimidazole) have been synthesized by reaction of Pd(OAc)₂ with the respective diazolium bromides (A·2HBr - F·2HBr) in DMSO. A comparative catalytic study employing aryl chlorides in the Mizoroki-Heck reaction revealed the superiority of methylene- and propylene-bridged dibenzimidazolin-2-ylidenes over their imidazole-derived analogues. Based on these results, two new propylene-bridged hetero-dicarbene complexes (7 and 8) were designed containing a mixed benzimidazole/imidazole-derived NHC-donor set. Notably, both complexes outperformed their homo-dicarbene analogues, which may be due to the electronic asymmetry induced by hetero-dicarbene ligands. The molecular structures of complex 6 and 8 are also presented.     

Molecular recognition of biotin, barbital and tolbutamide with new synthetic receptors

We have measured, by means of NMR titrations, the binding constants for the complexes between hosts N,N′-bis(6-methylpyridin-2-yl)-1,3-benzenedicarboxamide (7) and 4-chloro-N,N′-bis(6-methylpyridin-2-yl)-2,6-pyridinedicarboxamide (8, hydrated) with biotin methyl ester (1), N,N′-dimethylurea (2), 2-imidazolidone (3), N,N′-trimethylenurea (4), barbital (5) and tolbutamide (6) as guests. Molecular Mechanics calculations (Monte Carlo Conformational Search, AMBER and OPLS force fields, MacroModel v.8.1) on the complexes formed between the foregoing guests and hosts 7 and 8, comparatively with 4-oxo-N,N′-bis(6-methylpyridin-2-yl)-1,4-dihydro-2,6-pyridinedicarboxamide (9a) have been carried out in order to determine the correlation between experimental and theoretical results and to understand the behaviour of the designed new hosts. Finally we have performed single point DFT [B3LYP/6-31G(d,p)] calculations on the optimised Molecular Mechanics geometries for the complexes between hosts 7-9 and water.