Synthesis of macrocyclic compounds with steric barriers in macroheterocycle proceeding from (Z)-1,2,3,6-tetrahydrophthalic and phthalic acids

Using 1,2-dibromoethane, (E)-1,4-dibromo-2-butene, (Z)-1,2,3,6-tetrahydrophthalic and phthalic acids we obtained along [1+1] scheme uncommon macrocyclic compounds containing ester groups, multiple bonds, and amide moieties in the macroheterocycle. The neutralization of bis-acids with ethylenediamine gave the corresponding macrocyclic diammonium salts that on heating to the melting point were converted into the corresponding macrocyclic diamides. The structure of compounds obtained was established from the elemental analyses, IR and NMR spectra.     

Preparation of macrocyclic di- and tetraamides containing unsubstituted macroring nitrogen atoms,tertiary amine sidearms and/or piperazine subcyclic units

Seven new macrocyclic di- and tetramides have been prepared by the cyclization reaction of various polyamines or, in one case, a dimercaptan with a bis(α-chloroamide) or diethyl malonate. Three of the resulting macrocyclic diamides were reduced with borane to form the corresponding polyaza-crown analogs. Macrocycles prepared include two tetraaza-12-crown-4, two tetraaza-13-crown-4, two tetraaza-14-crown-4, one dithiadiaza-14-crown-4, one tetraaza-15-crown-4 with a piperazine subcyclic group, one dibenzotetraaza-24-crown-8 and one octaaza-30-crown-8 with two piperazine subcyclic groups.     

Micowave assisted synthesis of benzo‐substituted macrocyclic diamides and their corresponding macrocyclic dithiodiamides

A synthesis of a series of macrocyclic diamides 3 in good yields by reacting the corresponding bis phenols 4 with the appropriate dihalo alkanes 6 either in solvent or in dry media under microwave irradiation. Thiation of 3 with P₂S₅ or Lawesson's reagent in solvent free conditions under microwave irradiation is also described.     

Macroheterocycles. 12. Synthesis and properties of macrocyclic tetraamides

The N,N-bis(methoxycarbonylmethyl)diamides of the corresponding acids were obtained by the reaction of glycine methyl ester hydrochloride with oxalic, succinic, adipic, diglycolic, and triglycolic acid dichlorides. Fourteen new macrocyclic tetraamides were obtained by the reaction of these diamides with various diamines. The structures of the synthesized compounds were proved by means of their IR, PMR, and mass spectra.See [1] for Communication 11.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 8, pp. 1132–1137, August, 1981.     

A facile and convenient method for the preparation of macrocyclic diamides

A number of macrocyclic diamides have been synthesized from the reaction of a diacid dicarboxylic dichloride with primary diamino compound in the presence of magnesium oxide-silica gel at room temperature in good yields. Using urea and thiourea as well as diamines to produce the corresponding macrocycles in the range of 52–56% yields are also included in this paper. One of the major advantages of this method is simple regeneration of inorganic solid and its reuse through several cycles without a decrease in activity.     

Anion binding versus intramolecular hydrogen bonding in neutral macrocyclic amides

Although amide groups are important hydrogen-bond donors in natural and synthetic anion receptors, studies on structure-affinity relationships of amide-based macrocyclic receptors are still very limited. Therefore, we synthesized a series of macrocyclic tetraamides 5-8 derived from 1,3-benzenedicarboxylic (isophthalic) acid and aliphatic alpha,omega-diamines of different lengths. (1)H NMR titrations in DMSO solution show that the anion affinity of these receptors decreases with increasing size of the macrocycle irrespective of the anion, and this suggests a minor role of geometric complementarity. Comparison with their previously studied pyridine congeners reveals that the isophthalic acid based macrocycles are less potent, in contrast to what was found for simple model diamides. Combined theoretical and experimental structural studies were carried out to determine the reasons behind this behaviour. The results show that the unexpectedly low anion binding ability of the isophthalic acid-based receptors is due to the self-complementary nature of the isophthalic bis-amide fragments: when two such moieties are present within a sufficiently flexible macrocycle, they adopt syn-anti conformations and bind each other by two strong intramolecular hydrogen bonds that close the macrocyclic cavity. Nevertheless, anion binding is able to break these hydrogen bonds and switch a macrocycle into a convergent all-syn conformation. Despite the ill-preorganized conformation, 20-membered receptor 6 is better than either its open-chain analogue (macrocyclic effect) and/or its isomer having differently placed carbonyl groups. The crystal structures of four anion complexes of the macrocyclic receptors are reported. X-ray studies and solution NMR data confirmed the inclusive nature of the complexes and pointed to strong involvement of aromatic CH hydrogen atoms in anion binding.     

New heavy metal ion-selective macrocyclic ligands with mixed-donor atoms and their extractant properties

Synthetic procedures for new macrocyclic diamides with N₂S₄O₃- and N₂S₅O₃-donors were given. The corresponding macrocyclic ligands were prepared by reaction of NaBH₄ with the macrocyclic diamides in the presence of boron triflouride ethyl etherate in dry tetrahydrofuran. The solvent extraction method was used to evaluate metal-ion binding properties of the new ligands. The values of the extraction constants (log K _ex) and the complex compositions were determined for the extracted complexes. The solvent extraction experiments suggested that the reduced N₂S₅O₃-donor macrocycle has Ag⁺ selectivity compared to Pb²⁺, Co²⁺, Ni²⁺, Mn²⁺, and Cd²⁺ for chloroform as organic solvent.     

Calcium-selective electrodes based on calcium tetra(4-chlorophenyl)borate complexes of macrocyclic polyether diamides

The preparation of macrocyclic 7,19-dibenzyl-7,19-diaza-1,4,10,13,16-pentaoxa-cycloheneicosane-6, 20-diones substituted in positions 2 and 3 with methyl groups, and their properties in PVC membranes as calcium sensors are described. Complexes of these polyether diamides (PEDA) with calcium and tetra(4-chlorophenyl)borate (TClPB) ions having the composition 2PEDA·Ca·2TClPB were prepared. Calcium electrodes based on these complexes have selectivity coefficients for calcium over barium up to 10³, and over alkali metals up to 3 × 10⁴.     

Construction of new [2]pseudorotaxanes by hydrogen bonding assembly of macrocyclic tetrathiolactam with amides and an ester

Thionation of a macrocyclic tetralactam gave a new macrocyclic tetrathiolactam. [2]Pseudorotaxanes constructed from the macrocycle with diamides and a diester as a neutral guest have been prepared by a facile threading process. Molecular structures and hydrogen bonding association properties of the [2]pseudorotaxanes were characterized by X-ray crystallography and ¹H NMR spectroscopy.     

Synthesis of Novel Benzo‐substituted Macrocyclic Ligands Containing Thienothiophene Subunits

A facile synthetic approach was adopted toward the synthesis of benzo‐fused macrocyclic ligands with thienothiophene group incorporated into the ring system. Thus, treatment of bis(bromomethyl) compound 2 with the K salt of the appropriate bis(phenol)s 3a , 3b , 3c , 3d in boiling DMF led to the formation of the novel macrocyclic diamides 4a , 4b , 4c , 4d in 39–58% yield. Reaction of 2 with the potassium salt (obtained upon treatment of salicylaldehyde 5 with ethanolic potassium hydroxide) in refluxing DMF afforded the novel bis(aldehyde) 6 in 73% yield. Cyclocondensation of 6 with the appropriate bis(N‐substituted) cyanoacetamide derivatives 7a and 7b afforded the target macrocycles 8a and 8b in 48 and 55% yields, respectively. Reaction of the bis(aldehyde) 6 with 1,3‐ and 1,4‐diaminopropane 9a and 9b in refluxing ethanol under high‐dilution conditions afforded the corresponding macrocyclic Schiff bases 10a and 10b in 41 and 37% yields, respectively. Cyclocondensation of 6 with 1,3‐bis(4‐amino‐5‐phenyl‐3‐ylsulfanylmethyl)propane ( 15 ) in glacial acetic acid under high‐dilution conditions gave the macrocyclic Schiff base 14 in 46% yield. On the other hand, cyclocondensation of bis(aldehydes) 17 and 20 with 3,4‐bis(4‐amino‐5‐phenyl‐3‐ylsulfanylmethyl)thienothiophene 16 in refluxing acetic acid under high‐dilution conditions afforded unexpectedly the novel condensed heteromacrocycles 18 and 21 in 33 and 28%, respectively. The novel bis(amine) 16 was obtained in 50% yield upon treatment of 2 with 4‐amino‐1,2,4‐triazol‐3‐thione 11 in ethanol/water mixture containing potassium hydroxide.     

Effects of internal hydrogen bonds between amide groups: protonation of alicyclic diamides

The proton affinity (PA) of cyclopentane carboxamide 1, cyclohexane carboxamide 2 and their secondary and tertiary amide derivatives S1, S2, T1 and T2, was determined by the thermokinetic method and the kinetic method [PA(1) = 888 +/- 5 kJ mol(1); PA(2) = 892 +/- 5 kJ mol(1); PA(S1) = 920 +/- 6 kJ mol(1); PA(S2) = 920 +/- 6 kJ mol(1); PA(T1) = 938 +/- 6 kJ mol(1); PA(T2) = 938 +/- 6 kJ mol(1)]. Special entropy effects are not observed. Additionally, the effects of protonation have been studied using an advanced kinetic method for all isomers 37 of cyclopentane dicarboxamides and cyclohexane dicarboxamides (with the exception of cis-cyclopentane-1,2-dicarboxamide) and their bis-tertiary derivatives T3T7 by estimating the PA and the apparent entropy of protonation Delta(DeltaS(app)). Finally, the study was extended to bicyclo[2.2.1]hepta-2,5-diene-2,3-dicarboxamide 8 and its bis-tertiary derivative T8, to all stereoisomers of bicyclo[2.2.1]heptane-2,3-dicarboxamide 9, their secondary and tertiary amide derivatives S9 and T9, and to endoendobicyclo[2.2.1]heptane-2,5-dicarboxamide 10 and the corresponding secondary and tertiary derivatives S10 and T10. Compared with 1 and 2, all alicyclic diamides exhibit a significant increase of the PA (DeltaPA) and special entropy effects on protonation. For alicyclic diamides, which can not accommodate a conformation appropriate for building a proton bridge, the values of DeltaPA and Delta(DeltaS(app)) are small to moderate. This is explained by ion / dipole interactions between the protonated and neutral amide group which stabilize the protonated species but hinder the free rotation of the amide groups. If any of the conformations of the alicyclic diamide allows formation of a proton bridge, DeltaPA and Delta(DeltaS(app)) increase considerably. A spectacular case is cis-cyclohexane-1,4-dicarboxamide 7c which is the most basic monocyclic diamide, although generation of the proton bridge requires the unfavorable boat conformation with both amide substituents at a flagpole position. A pre-orientation of the two amide groups in such a 1,4-position in 10 results in a particularly large PA of < 1000 kJ mol(1). The observation of comparable values for Delta(DeltaS(app)) for linear and monocyclic diamides indicates that a major part of the entropy effects originates from freezing the free rotation of the amide groups by formation of the proton bridge. This is corroborated by observing corresponding effects during the protonation of dicarboxamides containing the rigid bicyclo[2.2.1]heptane carbon skeleton, where the only internal movements of the molecules corresponds to rotation of the amide substituents.     

Synthesis of macrocyclic bis(phenylbenzoxazole) derivatives via tandem claisen rearrangement and their fluorescence behavior

Novel macrocyclic bis(phenylbenzoxazole) derivatives were easily synthesized from macrocyclic isobutenyl bis(amide‐ether)s by tandem Claisen rearrangement and subsequent intramolecular cyclization of the amide‐phenol intermediates. The position of substitution of the oligoethylene glycol moiety on the phenylamido groups of the macrocycles did not have a large effect on the yields of the bis(benzoxazole)s for the meta and para derivatives. The fluorescence quantum yields of most of the macrocyclic bis(benzoxa‐zole)s were lower than those of the corresponding nonmacrocyclic bis(benzoxazole) model compounds. The quantum yields of the para‐substituted macrocyclic bis(benzoxazole)s were clearly lower than those of the model compounds and decreased with increasing length of the oligoethylene chain.     

Reactions of macrocyclic rhodium carbenoids: regioselective synthesis of indol-3-yl macrocyclic lactones and cryptands

A wide variety of new macrocyclic diazocarbonyl compounds with various spacers was synthesized. Macrocyclic rhodium(II) carbenoid insertion with various substituted indoles was performed to afford regioselectively, indol-3-yl macrocyclic di- or tetralactones (C3-alkylation). Double carbenoid insertion was also performed to afford indolyl cryptand molecules.     

Design, synthesis, and biological evaluation of novel C14-C3'BzN-linked macrocyclic taxoids

Novel macrocyclic paclitaxel congeners were designed to mimic the bioactive conformation of paclitaxel. Computational analysis of the "REDOR-Taxol" structure revealed that this structure could be rigidified by connecting the C14 position of the baccatin moiety and the ortho position of C3'N-benzoyl group (C3'BzN), which are ca. 7.5 A apart, with a short linker (4-6 atoms). 7-TES-14beta-allyloxybaccatin III and (3R,4S)-1-(2-alkenylbenzoyl)-beta-lactams were selected as key components, and the Ojima-Holton coupling afforded the corresponding paclitaxel-dienes. The Ru-catalyzed ring-closing metathesis (RCM) of paclitaxel-dienes gave the designed 15- and 16-membered macrocyclic taxoids. However, the RCM reaction to form the designed 14-membered macrocyclic taxoid did not proceed as planned. Instead, the attempted RCM reaction led to the occurrence of an unprecedented novel Ru-catalyzed diene-coupling process, giving the corresponding 15-membered macrocyclic taxoid (SB-T-2054). The biological activities of the novel macrocyclic taxoids were evaluated by tumor cell growth inhibition (i.e., cytotoxicity) and tubulin-polymerization assays. Those assays revealed high sensitivity of cytotoxicity to subtle conformational changes. Among the novel macrocyclic taxoids evaluated, SB-T-2054 is the most active compound, which possesses virtually the same potency as that of paclitaxel. The result may also indicate that SB-T-2054 structure is an excellent mimic of the bioactive conformation of paclitaxel. Computational analysis for the observed structure-activity relationships is also performed and discussed.     

NMR relaxometric study of new Gd(III) macrocyclic complexes and their interaction with human serum albumin

Five novel Gd(iii) complexes based on the structure of the heptadentate macrocyclic 1,4,7,10-tetraazacyclododecane-1,4,7-triacetic acid (DO3A) ligand have been synthesized and their (1)H and (17)O NMR relaxometric properties investigated in detail. The complexes have been functionalised on the secondary nitrogen atom of the macrocyclic ring with different pendant groups for promoting their ability to interact non-covalently with human serum albumin (HSA). The analysis of the proton relaxivity, measured as a function of pH and magnetic field strength, have revealed that the three complexes bearing a poly(ethylene glycol)(PEG) chain possess a single coordinated water molecule, whereas the complexes functionalised with 1-[3-(2-hydroxyphenyl)]-propyl and 1-[3-(2-carboxyphenyloxy)]-propyl pendant groups have two inner sphere water molecules. The water exchange rates, measured by variable temperature (17)O NMR, cover a broad range of values (from 18 to 770 ns) as a function of their charge, the chemical nature of the substituent and its ability to organize a second sphere of hydration near the water(s) binding site. All the complexes have shown some degree of interaction with HSA, with a stronger binding affinity measured for those bearing an aromatic moiety on the pendant group. However, upon binding the expected relaxation enhancement has not been observed and this has been explained with the displacement of the coordinated water molecules by the protein and formation of ternary adducts.     

Phenol-containing macrocyclic diamides as new catalysts in the highly regioselective conversion of epoxides to beta-hydroxy thiocyanates.

The regioselective ring-opening reactions of some epoxides with ammonium thiocyanate in the presence of a series of new phenol-containing macrocyclic diamides and also dibenzo-18-crown-6-, 18-crown-6-, benzo-15-crown-5-, and pyridine-containing macrocyclic diamide have been studied. The epoxides were subject to cleavage by NH(4)SCN in the presence of these catalysts under mild reaction conditions in various aprotic solvents. In this study, reagents and conditions have been discovered with which the individual beta-hydroxy thiocyanates can be synthesized in high yield and with more than 90% regioselectivity. The results can be discussed in terms of a four-step mechanism: (1) formation of complex between catalyst and NH(4)SCN, (2) release of SCN(-) nucleophile from the complex, (3) reaction of the active nucleophile at the less sterically hindered site in the epoxide, and (4) regeneration of catalyst. The major advantages of this method are as follows: (1) high regioselectivity, (2) simple regeneration of catalyst, (3) its reuse through several cycles without a decrease in activity, and (4) ease of workup of the reaction.     

Uranyl-selective PVC membrane electrodes based on some recently synthesized benzo-substituted macrocyclic diamides

Four different recently synthesized macrocyclic diamides were studied to characterize their abilities as uranyl ion carriers in PVC membrane electrodes. The electrodes based on macrocycle 1,18-diaza-3,4;15,16-dibenzo-5,8,11,14,21,24-hexaoxacyclohexaeicosane-2,17-dione resulted in a Nernstian response for UO(2)(2+) ion over wide concentration ranges. The linear concentration range for the polymeric membrane electrode (PME) is 3.0x10(-6)-8.2x10(-3) M with a detection limit of 2.2x10(-6) and that for the coated graphite electrode (CGE) is 5.0x10(-7)-1.5x10(-3) M with a detection limit of 3.5x10(-7) M. The electrodes manifest advantages of low resistance, very fast response and, most importantly, good selectivities relative to a wide variety of other cations.     

New diazadi(and tri)thia‐21‐crown‐7 ethers containing 8‐hydroxyquinoline side arms

A series of macrocyclic diazadi(and tri)thiacrown ethers containing two 5‐substituent‐8‐hydroxyquinoline side arms have been synthesized from the corresponding macrocyclic diazadi(and tri)thiacrown ethers. The crown ethers were obtained by reduction of the proper macrocyclic di(and tri)thiadiamides by borane‐tetrahydrofuran or by sodium borohydride‐boron trifluoride ethyl etherate‐tetrahydrofuran. The yields for the reduction of diamides by sodium borohydride‐boron trifluoride ethyl etherate‐tetrahydrofuran were higher than those by borane‐tetrahydrofuran. The following four methods were used to prepare macrocycles bearing two 8‐hydroxyquinoline side arms: (1) Mannich reaction with 8‐hydroxyquinoline; (2) Reductive animation with 8‐hydroxyquinoline‐2‐carboxaldehyde using sodium triacetoxyborohydride as the reducing agent; (3) Cyclization of N,N'‐bis(8‐hydroxyquinolin‐2‐ylmethyl)‐1,2‐bis(2‐aminoethoxy)ethane (38) with bis(α‐chloroamide) 5 ; and ( 4 ) A step‐by‐step process wherein macrocyclic trithiadiamide 11 was reduced by lithium aluminum hydride‐tetrahydrofuran to the cyclic monoamide 36 , which smoothly reacted with 5‐chloro‐8‐hydroxyquinoline to produce monosubstituted‐macrocyclic monoamide 39 .     

PMR investigation of the hydration of macrocyclic polyethers

PMR was used to investigate the reaction of water dissolved in chloroform with ten macrocyclic polyethers, differing from each other by the kind of donor atoms, the size of the cavity, and the character of the substituants in the macrocycle. The curves representing the shift of the proton signal of water as function of the concentration of the macrocyclic polyether in chloroform were used to calculate the stability constants of the associates of the macrocyclic polyethers with water with the composiiton 11. The analysis of the association constants obtained showed that, according to their ability to coordinating water, the investigated macrocyclic polyethers can be placed into the following order: diaza-18-crown-6 > dicyclohexyl-18-crown-6 > kryptand(2.2.2) > 18-crown-6 > dibenzo-18-crown-6 > dibenzo-24-crown-8 > 15-crown-6 > benzo-15-crown-5 > dithio-18-crown-6 > benzo-12-crown-4.Translated from Teoreticheskaya i Eksperimental'naya Khimiya, Vol. 21, No. 2, pp. 248–252, March–April, 1985.     

Europium(III) macrocyclic complexes with alcohol pendant groups as chemical exchange saturation transfer agents

Paramagnetic lanthanide(III) complexes that contain hyperfine-shifted exchangeable protons offer considerable advantages over diamagnetic molecules as chemical exchange saturation transfer (CEST) agents for MRI. As part of a program to investigate avenues to improve the sensitivity of such agents, the CEST characteristics of europium(III) macrocyclic complexes having appended hydroxyethyl groups were investigated. The CEST spectrum of the asymmetrical complex, EuCNPHC3+, shows five distinct peaks for each magnetically nonequivalent exchangeable proton in the molecule. The CEST spectra of this complex were fitted to NMR Bloch theory to yield exchange rates between each of six exchanging proton pools (five on the agent plus bulk water). Exchange between the Eu3+-bound hydroxyl protons and bulk water protons was slow in dry acetonitrile but accelerated incrementally upon stepwise addition of water. In pure water, exchange was too fast to observe a CEST effect. The utility of this class of europium(III) complex for CEST imaging applications is ultimately limited by the small chemical shifts induced by the hydroxyl-appended ligands of this type and the resulting small Deltaomega values for the exchangeable hydroxyl protons.