Thiepin‐Fused Heteroacenes: Simple Synthesis,Unusual Structure,and Semiconductors with Less Anisotropic Behavior

The simple one‐pot syntheses of sulfur‐rich thiepin‐fused heteroacences with an alkylidene–fluorene framework, THA1 and THA6 (thiepin‐fused heteroacene 1 or 6, in which the thiepin is conjugated at both ortho positions with S? CH₃ or S? C₆H₁₃, respectively), is reported. Based on electrochemical studies and theoretical calculations, their LUMO energies are relatively low (?3.26 eV), and their HOMO and HOMO?1 orbitals are nearly degenerate. The thiepin ring contributes mainly to HOMO?1 and LUMO orbitals, however, HOMO orbitals dominantly reside on thienoacence rings. Within the crystal of THA1, the molecules adopt a herringbone arrangement and multiple intermolecular interactions lead to the formation of a 2D network. Interestingly, THA6 shows totally different intermolecular arrangements. Organic field‐effect transistor (OFET) devices show both compounds exhibiting p‐type semiconducting behavior. Thin films or microcrystals of THA1 possess relatively high hole mobility. Moreover, the mobilities of the microcrystal of THA1 along three directions are in the same order, thus the hole‐carrier transporting within the hexagonal‐plane of microcrystal of THA1 exhibits less anisotropic behavior. In comparison, both thin films and microrods of THA6 show low hole mobilities. This agrees well with the intermolecular arrangements and interactions within crystal of THA6. Further theoretical calculations reveal that significant intermolecular electronic coupling among HOMO?1 orbitals and sulfur atoms play an important role in intermolecular electronic coupling for THA1.     

HeI photoelectron spectroscopic study of the electronic structure of SSF2 and FSSF compounds

HeI photoelectron (PE) spectra are re-recorded for SSF₂ and FSSF. The assignment of bands has been made with the aid of band shapes, band intensities and ab initio calculations. In the PE spectrum of SSF₂, two sharp peaks at 10.48 and 11.22 eV are considered to result from through-space interaction of lone-pair orbitals in the two S atoms and two sharp peaks at 12.50 and 12.90 eV from through-space interaction of lone-pair orbitals in the two F atoms. The larger splitting of the S atoms can be attributed to the larger 3p orbital of S. The lack of sharp peaks in the PE spectrum of FSSF shows that there is no orbital which embodies the character of a lone-pair. So the PE spectra of SSF₂ and FSSF are examples embodying through-space interaction of lone-pair orbitals.     

A quantitative analysis of the through-space and the through-bond interactions between lone-pairs in azines: pyridazine,pyrimidine and pyrazine

The INDO calculations were performed on the three azines: pyridazine, pyrimidine, and pyrazine. The cannonical molecular orbitais obtained by these calculations were then transformed into the localized molecular orbitals. With the use of the localized molecular orbitals, the variation in the lone-pair orbital energies of these molecules were pursued in the light of the through-space and/or the through-bond interactions between the specified localized molecular orbitals in a molecule selectively. The interactions were expressed by the summation of several terms: through-space, through-bond, through-virtuals and coupling terms.     

Metal-sulfur valence orbital interaction energies in metal-dithiolene complexes: determination of charge and overlap interaction energies by comparison of core and valence ionization energy shifts

The electronic interactions between metals and dithiolenes are important in the biological processes of many metalloenzymes as well as in diverse chemical and material applications. Of special note is the ability of the dithiolene ligand to support metal centers in multiple coordination environments and oxidation states. To better understand the nature of metal-dithiolene electronic interactions, new capabilities in gas-phase core photoelectron spectroscopy for molecules with high sublimation temperatures have been developed and applied to a series of molecules of the type Cp(2)M(bdt) (Cp = η(5)-cyclopentadienyl, M = Ti, V, Mo, and bdt = benzenedithiolato). Comparison of the gas-phase core and valence ionization energy shifts provides a unique quantitative energy measure of valence orbital overlap interactions between the metal and the sulfur orbitals that is separated from the effects of charge redistribution. The results explain the large amount of sulfur character in the redox-active orbitals and the 'leveling' of oxidation state energies in metal-dithiolene systems. The experimentally determined orbital interaction energies reveal a previously unidentified overlap interaction of the predominantly sulfur HOMO of the bdt ligand with filled π orbitals of the Cp ligands, suggesting that direct dithiolene interactions with other ligands bound to the metal could be significant for other metal-dithiolene systems in chemistry and biology.     

Synthesis of 1-azaspiro[2.4]hepta-1,4,6-trienes and azaspiroconjugation studied by photoelectron spectroscopy

1-Azaspiro[2.4]hepta-1,4,6-trienes 3a-c have been prepared by photolysis or thermolysis of 6-azidofulvenes 5a-c, which were accessible by nucleophilic substitution reactions of the precursors 4a,b or by nucleophilic addition of hydrazoic acid to ethenylidene-cyclopentadiene (6c). The UV photoelectron spectrum of 2-methyl-1-azaspiro[2.4]hepta-1,4,6-triene (3c) has been recorded and analyzed by making use of density functional theory (DFT) B3LYP calculations. Substantial homoconjugative interactions have been determined. The lone-pair orbital n(N) of the 2H-azirine nitrogen atom interacts with the pi 1 orbital of the cyclopentadiene ring. The energies of these orbitals are lowered or increased by 0.95 or 0.91 eV with respect to the two parent compounds cyclopentadiene (7) and 3-methyl-2H-azirine (9), respectively. In addition, in compound 3c the pi (C=N) orbital of the three-membered ring interacts with a sigma orbital of the cyclopentadiene unit and is destabilized by 0.47 eV by this effect.     

An analysis of the through-bond interaction using the localized molecular orbitals with ab initio calculations—II : Lone-pair orbital energies in bicyclo compounds: 7-azabicyclo[2.2.1]heptane and 2-azabicyclo[2.2.2]octane,and their n-methyl derivatives

Ab intio SCF MO calculations using STO-3G basis set were performed on 7-azabicyclo[2.2.1]heptane, N-methyl-7-azabicyclo[2.2.1]heptane, 2-azabicyclo[2.2.2)octane, N-methyl-2-azabicyclo[2.2.2)octane, and their model molecules. The orbital energies obtained by these calculations were compared with the experimental ionization potentials The canonical MOs obtained for the model molecules were then transformed into the localized Mos. With the use of the localized MOs thus obtained, the lone-pair orbital energies were pursued in the light of the through-space and/or the through-bond interactions between thw specified localized MOs. As a result of this analysis, it was found that the effects of the inner shell orbitals, 1s electrons of the N atom, and of the neighbouring N-C bonds of the skeleton (through-bond interaction) play a dominant role in the interaction with the lone-pair orbitals. It was also found that the effect of the N-Me group on the lone-pair orbital energy is considerably important.     

Electronic structure of the cysteine thiyl radical: a DFT and correlated ab initio study

The electronic structure and the unusual EPR parameters of sulfur-centered alkyl thiyl radical from cysteine are investigated by density functional theory (DFT) and correlated ab initio calculations. Three geometry-optimized, staggered conformations of the radical are found that lie within 630 cm(-1) in energy. The EPR g-values are sensitive to the energy difference between the nearly-degenerate singly occupied orbital and one of the lone-pair orbitals (excitation energies of 1732, 1083, and 3429 cm(-1) from Multireference Configuration Interaction calculations for the structures corresponding to the three minima), both of which are almost pure sulfur 3p orbitals. Because of the near degeneracy, the second order correction to the g tensor, which is widely used to analyze g-values of paramagnetic systems, is insufficient to obtain accurate g-values of the cysteine thiyl radical. Instead, an expression for the g tensor must be used in which third order corrections are taken into account. The near-degeneracy can be affected to roughly equal extents by changes in the structure of the radical and by hydrogen bonds to the sulfur. The magnitude of the hyperfine coupling constants for the beta protons of the cysteine thiyl radical is found to depend on the structure of the radical. On the basis of a detailed comparison between experimental and calculated g-values and hyperfine coupling constants an attempt is made to identify the structure of thiyl radicals and the number of hydrogen bonds to the sulfur.     

Theory Studies on the Intermolecular Interactions of Urea Nitrate with RDX

Six fully optimized geometries of urea nitrate cation and RDX complexes have been obtained with DFT-B3LYP and MP2 methods at the 6-311++G** level. The intermolecular interaction energies have been calculated with basis set superposition error (BSSE) and zero point energy (ZPE) correction. The nature of intermolecular interaction has been revealed by the analysis of AIM and NBO. The results indicate that the greatest binding energy of urea nitrate with RDX is –82.47kJ/mol. The O–H…O and N–H…O hydrogen bonds are important intermolecular interactions of urea nitrate cation with RDX, and the origin of hydrogen bonds is the oxygen atom offering its lone-pair electrons to the σ(O-H)* or σ(O-H)* antibonding orbital. The intermolecular interactions strengthen the N–NO2 bond, leading to the reduced sensitivity of urea nitrate and RDX mixture explosive.     

以四氟苯甲酸根及联吡啶为配体的铜配合物的合成、晶体结构及量子化学研究

水热条件下,合成了一个新的单核铜(Ⅱ)配合物[Cu(TFBA)(2,2′-bipy)(H2O)2](TFBA)(HTFBA=2,3,4,5-四氟苯甲酸,2,2′-bipy=2,2′-联吡啶),并通过元素分析、红外光谱,热重分析和X-射线单晶衍射对其进行了表征。铜(Ⅱ)分别与来自1个2,2′-bipy的2个氮原子、1个2,3,4,5-四氟苯甲酸根的1个氧原子和2个水分子中的2个氧原子配位,形成变形的四方锥的配位构型。配合物通过强的O-H…O氢键作用形成了二聚体结构,该二聚体又通过分子间弱的C-H…O氢键和C-H…π作用形成了一维链状结构。对配合物中[Cu(TFBA)(2,2′-bipy)(H2O)2]+进行了量子化学从头计算,探讨了配合物的稳定性、分子轨道能量以及一些前沿分子轨道的组成特征。     

Electronic structure of H2CS3 and H2CS4: an experimental and theoretical study

The HeI photoelectron spectra of H2CS3 and H2CS4 in the gas phase have been obtained for the first time. A complete theoretical study involving the calculation of the ionization energies using orbital valence Green's functional (OVGF) and population analysis was performed. Calculations of cation-radical forms were carried out in order to interpret the main characters of the six highest occupied molecular orbitals (HOMOs). The first vertical ionization potentials are 8.74 and 8.56eV for H2CS3 and H2CS4, and attributed to {9b2(nS(C=S))}-1 and {8a"(3ppi*(S-S), nS)}-1, respectively. Meanwhile, the energy sequence of three types of sulfur 3p lone-pair have been discussed: 3ppi(S-S)*相似文献   

Deciphering the Multifarious Charge-Transport Behaviour of Crystalline Propeller-Shaped Triphenylamine Analogues

A collection of para-substituted propeller-shaped triphenylamine (TPA) derivatives have been computationally investigated for charge-transport characteristics exhibited by the derivatives by using the Marcus–Hush formalism. The various substituents chosen herein, with features that range from electron withdrawing to electron donating in nature, play a key role in defining the reorganisation energy and electronic coupling properties of the TPA derivatives. The TPA moiety is expected to possess weak electronic coupling on the basis of poor orbital overlap upon aggregation, owing to the restriction imposed by the propeller shape of the TPA core. However, the substituent groups attached to the TPA core can significantly dictate the crystal-packing motif of the TPA derivatives, wherein the variety of noncovalent intermolecular interactions subsequently generated drive the packing arrangement and influence electronic coupling between the neighbouring orbitals. Intermolecular interactions in the crystalline architecture of TPA derivatives were probed by using Hirshfeld and quantum theory of atoms-in-molecules techniques. Furthermore, symmetry-adapted perturbation theory analysis of the TPA analogues has revealed that a periodic arrangement of energetically stable dimers with significant electronic coupling is essential to contribute high charge-carrier mobility to the overall crystal.     

DFT prediction of ground-state spin multiplicity of cyclobutane-1,3-diyls: notable effects of two sets of through-bond interactions

DFT calculations (UB3LYP/6-31+G**) have been performed to predict the substituent effect on the ground-state spin-multiplicity and the singlet-triplet energy gap in cyclobutane-1,3-diyls, CB-DR. The ground state is calculated to be largely dependent on the substituents (X, Y) at the C2 and C4 positions. The substituent effects can be reasonably explained by the two sets of through-bond (TB) interactions which result from the coupling between the symmetric nonbonding molecular orbital (Psi(S)) and the C-X (Y) sigma and sigma* orbitals.     

Weak Intermolecular Interactions in a Series of Bioactive Oxazoles

The intermolecular interactions in a series of nine similar 4,5-phenyl-oxazoles were studied on the basis of crystal structures determined by X-ray diffraction. The crystal architectures were analyzed for the importance and hierarchies of different, weak intermolecular interactions using three approaches: the geometrical characteristics, topological analysis (for the model based on the transfer of multipolar parameters), and energetics of the molecule–molecule interactions. The geometries of the molecules were quite similar and close to the typical values. The results of the analysis of the interactions suggest that the number of nonspecific interactions is more important than the apparent strength of the specific interactions. The interactions involving covalently bound bromine and divalent sulfur atoms were classified as secondary, they certainly did not define the crystal packing, and they played a minor role in the overall crystal cohesion energies. Incidentally, another method for confirming the degree of isostructurality, according to the topologies of the interactions, is described.     

Re_2(edt)_4的电子结构和电子吸收光谱的从头算研究

用密度泛函理论中的B3LYP/CEP-4G方法对Re2（edt）4进行了结构优化和自然键轨道计算,并用单电子激发组态相互作用方法（CIS）计算了Re2（edt）4的分子轨道和激发态。结果表明Re-Re之间不存在明显的三重键,进而很好地解释了Re2（edt）4分子的电子吸收光谱。     

Effect of electronic polarization on charge-transport parameters in molecular organic semiconductors

Theoretical investigations of charge transport in organic materials are generally based on the "energy splitting in dimer" method and routinely assume that the transport parameters (site energies and transfer integrals) determined from monomer and dimer calculations can be reliably used to describe extended systems. Here, we demonstrate that this transferability can fail even in molecular crystals with weak van der Waals intermolecular interactions, due to the substantial (but often ignored) impact of polarization effects, particularly on the site energies. We show that the neglect of electronic polarization leads to qualitatively incorrect values and trends for the transfer integrals computed with the energy splitting method, even in simple prototypes such as ethylene or pentacene dimers. The polarization effect in these systems is largely electrostatic in nature and can change dramatically upon transition from a dimer to an extended system. For example, the difference in site energy for a prototypical "face-to-edge" one-dimensional stack of pentacene molecules is calculated to be 30% greater than that in the "face-to-edge" dimer, whereas the site energy difference in the pentacene crystal is vanishingly small. Importantly, when computed directly in the framework of localized monomer orbitals, the transfer integral values for dimer and extended systems are very similar.     

Lead-poisoned zinc fingers: quantum mechanical exploration of structure, coordination, and electronic excitations

Density functional theory (DFT) structure calculations and time-dependent DFT electronic excitation calculations on simple mononuclear lead structures confirm recent reports on the stabilization of tricoordinated structural domains in poisoned proteins. However, the possibility of the formation of tetracoordinated lead complexes should not be disregarded in studies on mechanisms of lead toxicity because structures with both coordination modes are plausible and might contribute to observed UV spectra. Reported calculations along with detailed molecular orbital analysis confirm that the intense UV signal at around 260 nm is an indicator of the ligand-to-metal charge transfer (LMCT) band where the electrons are transferred from the sulfur 3p orbital to the lead 6p orbital. The composition of the LMCT band reveals significant excitations not only from the Pb-S bonding orbitals but also from sulfur lone-pair orbitals to the Pb-S antibonding orbitals for which the electron density is largely localized on the Pb "6p-like" molecular orbitals. There is a solid indication that the stereochemically active pair orbital of lead is not strongly hybridized and remains largely of the 6s character in tricoordinated lead structures and is minimally hybridized in tetracoordinated lead structures. Computed UV spectra of lead model complexes are compared to experimental UV spectra of model lead peptides. The comparison shows a good agreement with the major spectral trends and changes observed in these experiments.     

1,1-二氨基二硝基乙烯晶体的密度泛函理论研究

The electronic structural properties of 1,1-diamino dinitroethylene crystal have been studied by the DFT method with B3LYP function. The calculated crystal energy is -05.81 kJ/mol,which is comparable to the reference value. The frontier bands are quite flat,indicating that the molecular states are hardly perturbed by the crystalline environment. The distribution of electronic charges determines that the molecules pack through head-end to form wave-shaped layers with extensive intermolecular hydrogen bonding within the layers and ordinary van der Waals interactions between the layers. Judged by the value of band gap of 4.0 eV,it could be predicted that the conductivity of DADNE is between the semiconductor and insulator. The frontier orbital consists of atomic orbitals of C-NO2 group,indicating that there exists a stronger conjugation among the molecules and that C-NO2 is the region with high reactivity. The population of C-NO2 bond is much less than those of all the other bonds and therefore the detonation is initiated by the breakdown of this bond.     

Proton Transfer Influence on Geometry and Electron Density in Benzoic Acid–Pyridine Complexes

The influence of the proton transfer on the geometry of donor and acceptor molecule in benzoic acid–pyridine complexes is investigated by theoretical calculations at the B3LYP/6‐311++G** level of theory. Systematic shifts of the H‐atom in the H‐bond are reflected in the geometry of the COOH group and the lengths of aromatic ring bond lengths of the proton acceptor. Changes in electron densities have been studied by atoms in molecules analysis. A systematic natural bond orbital analysis has been performed to study the proton transfer mechanism. Two donor orbitals are engaged in the proton transfer process which is accompanied by a change in orbital delocalization of H‐atom that can switch between two donor orbitals so the path of proton transfer in intermolecular H‐bond is not determined by the orbital shape. Theoretical results have been confirmed by experimental results published previously.     

A G2 study of SH+ exchange reactions involving lone-pair donors and unsaturated hydrocarbons

The ligand exchange reactions between mono-adducts of the sulfenium ion ([SH-X]-) and either unsaturated hydrocarbons or lone-pair donors have been investigated computationally at the G2 level. The mono-adducts react with acetylene or ethylene to form a thiiranium or a thiirenium ion, in most cases without an overall barrier. In the reactions involving lone-pair donors, the original lone-pair donor is expelled from the [SH-X]- mono-adduct with the formation of a new mono-adduct. The reaction proceeds in this case via an intermediate di-adduct. Both the hydrocarbon and the lone-pair donor attack the mono-adduct with the relevant orbitals aligned in a near-collinear fashion, as was also the case for previously investigated reactions involving PH2+ and Cl+. The reaction energies and the binding energies of the intermediate complexes in the exchange reactions are primarily determined by the electronegativities of the lone-pair donors. The thermochemical data can be rationalized within the framework of qualitative molecular orbital theory, and the results are compared with our previous findings for the corresponding reactions involving PH2+ and Cl+.