Theoretical study and rate constant calculation for reaction of CF(3)CH(2)OH with OH

The reaction mechanism of CF(3)CH(2)OH with OH is investigated theoretically and the rate constants are calculated by direct dynamics method. The potential energy surface (PES) information, which is necessary for dynamics calculation, is obtained at the B3LYP/6-311G (d, p) level. The single-point energy calculations are performed at the MC-QCISD level using the B3LYP geometries. Complexes, with the energies being less than corresponding reactants and products, are found at the entrance and exit channels for methylene-H-abstraction channel, while for the hydroxyl-H-abstraction channel only entrance complex is located. By means of isodesmic reactions, the enthalpies of the formation for the species CF(3)CH(2)OH, CF(3)CHOH, and CF(3)CH(2)O are estimated at the MC-QCISD//B3LYP/6-311G (d, p) level of theory. The rate constants for two kinds of H-abstraction channels are evaluated by canonical variational transition state theory with the small-curvature tunneling correction (CVT/SCT) over a wide range of temperature 200-2000 K. The calculated results are in good agreement with the experimental values in the temperature region 250-430 K. The present results indicate that the two channels are competitive. Below 289 K, hydroxyl-H-abstraction channel has more contribution to the total rate constants than methylene-H-abstraction channel, while above 289 K, methylene-H-abstraction channel becomes more important and then becomes the major reaction channel.     

Variational transition‐state theory study of the atmospheric reaction OH + O3 → HO2 + O2

We report variational transition‐state theory calculations for the OH + O₃→ HO₂ + O₂ reaction based on the recently reported double many‐body expansion potential energy surface for ground‐state HO₄ [Chem Phys Lett 2000, 331, 474]. The barrier height of 1.884 kcal mol^?1 is comparable to the value of 1.77–2.0 kcal mol^?1 suggested by experimental measurements, both much smaller than the value of 2.16–5.11 kcal mol^?1 predicted by previous ab initio calculations. The calculated rate constant shows good agreement with available experimental results and a previous theoretical dynamics prediction, thus implying that the previous ab initio calculations will significantly underestimate the rate constant. Variational and tunneling effects are found to be negligible over the temperature range 100–2000 K. The O₁? O₂ bond is shown to be spectator like during the reactive process, which confirms a previous theoretical dynamics prediction. © 2007 Wiley Periodicals, Inc. 39: 148–153, 2007     

Kinetic calculation for the reaction of H with Si_2H_6 using the variational transition state theory

The reaction of disilane with atomic hydrogen has been studied. This reaction involves both substitution and abstraction. Calculations show that the hydrogen abstraction is the strongest competing channel. The canonical variational transition state theory with a small curvature tunneling correction (SCT) has been used for the kinetic calculation. The theoretical results are in good agreement with the available experimental data. Comparing the reactions of atomic hydrogen with disilane and silane, it can be seen that the reactivity of the Si-H bond is higher in Si2H6than that in SiH4.     

Direct dynamic study on the hydrogen abstraction reaction CH3CN + OH-->CH2CN + H2O

The reaction of acetonitrile with hydroxyl has been studied using the direct ab initio dynamics methods. The geometries, vibrational frequencies of the stationary points, as well as the minimum energy paths were computed at the BHandHLYP and MP2 levels of theory with the 6-311G(d, p) basis set. The energies were further refined at the PMP4/6-311+G(2df, 2pd) and QCISD(T)/6-311+G(2df, 2pd) levels of theory based on the structures optimized at BHandHLYP/6-311G(d, p) and MP2/6-311G(d, p) levels of theory. The Polyrate 8.2 program was employed to predict the thermal rate constants using the canonical variational transition state theory incorporating a small-curvature tunneling correction. The computed rate constants are in good agreement with the available experimental data.     

Theoretical study and rate constant calculation for the reactions of SH (SD) with Cl2, Br2, and BrCl

The mechanisms of the SH (SD) radicals with Cl2 (R1), Br2 (R2), and BrCl (R3) are investigated theoretically, and the rate constants are calculated using a dual-level direct dynamics method. The optimized geometries and frequencies of the stationary points are calculated at the MP2/6-311G(d,p) and MPW1K/6-311G(d,p) levels. Higher-level energies are obtained at the approximate QCISD(T)/6-311++G(3df, 2pd) level using the MP2 geometries as well as by the multicoefficient correlation method based on QCISD (MC-QCISD) using the MPW1K geometries. Complexes with energies less than those of the reactants or products are located at the entrance or the exit channels of these reactions, which indicate that the reactions may proceed via an indirect mechanism. The enthalpies of formation for the species XSH/XSD (X = Cl and Br) are evaluated using hydrogenation working reactions method. By canonical variational transition-state theory (CVT), the rate constants of SH and SD radicals with Cl2, Br2, and BrCl are calculated over a wide temperature range of 200-2000 K at the a-QCISD(T)/6-311++G(3df, 2pd)//MP2/6-311G(d, p) level. Good agreement between the calculated and experimental rate constants is obtained in the measured temperature range. Our calculations show that for SH (SD) + BrCl reaction bromine abstraction (R3a or R3a') leading to the formation of BrSH (BrSD) + Cl in a barrierless process dominants the reaction with the branching ratios for channels 3a and 3a' of 99% at 298 K, which is quite different from the experimental result of k3a'/k3' = 54 +/- 10%. Negative activation energies are found at the higher level for the SH + Br2 and SH + BrCl (Br-abstraction) reactions; as a result, the rate constants show a slightly negative temperature dependence, which is consistent with the determination in the literature. The kinetic isotope effects for the three reactions are "inverse". The values of kH/kD are 0.88, 0.91, and 0.69 at room temperature, respectively, and they increase as the temperature increases.     

Theoretical study on the atmospheric reaction of CH3O2 with OH

A quantum chemical investigation on the reaction mechanism of CH₃O₂ with OH has been performed. Based on B3LYP and QCISD(T) calculations, seven possible singlet pathways and seven possible triplet pathways have been found. On the singlet potential energy surface (PES), the most favorable channel starts with a barrierless addition of O atom to CH₃O₂ leading to CH₃OOOH and then the O? O bond dissociates to give out CH₃O + HO₂. On the triplet PES, the calculations indicate that the dominant products should be ³CH₂O₂ + H₂O with an energy barrier of 29.95 kJ/mol. The results obtained in this work enrich the theoretical information of the title reaction and provide guidance for analogous atmospheric chemistry reactions. © 2015 Wiley Periodicals, Inc.     

A dual-level ab initio and hybrid density functional theory dynamics study on the unimolecular decomposition reaction C2H5O-->CH2O + CH3

We present a direct ab initio and hybrid density functional theory dynamics study of the thermal rate constants of the unimolecular decomposition reaction of C2H5O-->CH2O + CH3 at a high-pressure limit. MPW1K/6-31+G(d,p), MP2/6-31+G(d,p), and MP2(full)/6-31G(d) methods were employed to optimize the geometries of all stationary points and to calculate the minimum energy path (MEP). The energies of all the stationary points were refined at a series of multicoefficient and multilevel methods. Among all methods, the QCISD(T)/aug-cc-pVTZ energies are in good agreement with the available experimental data. The rate constants were evaluated based on the energetics from the QCISD(T)/aug-cc-pVTZ//MPW1K/6-31+G(d,p) level of theory using both microcanonical variational transition state theory (microVT) and RRKM theory with the Eckart tunneling correction in the temperature range of 300-2500 K. The calculated rate constants at the QCISD(T)/aug-cc-pVTZ/MPW1K/6-31+G(d,p) level of theory are in good consistent with experimental data. The fitted three-parameter Arrhenius expression from the microVT/Eckart rate constants in the temperature range 200-2500 K is k = 2.52 x 10(12)T(0.41)e(-8894.0/T) s(-1). The falloff curves of pressure-dependent rate constants are performed using master-equation method within the temperature range of 391-471 K. The calculated results are in good agreement with the available experimental data.     

Kinetic calculation for the reaction of H with Si2H6 using the variational transition state theory

The reaction of disilane with atomic hydrogen has been studied. This reaction involves both substitution and abstraction. Calculations show that the hydrogen abstraction is the strongest competing channel. The canonical variational transition state theory with a small curvature tunneling correction (SCT) has been used for the kinetic calculation. The theoretical results are in good agreement with the available experimental data. Comparing the reactions of atomic hydrogen with disilane and silane, it can be seen that the reactivity of the Si-H bond is higher in Si₂H₆ than that in SiH₄.     

Theoretical study of the excited‐state double proton transfer in the (3‐methyl‐7‐azaindole)‐(7‐azaindole) heterodimer

Excited‐state double proton transfer (ESDPT) in the (3‐methyl‐7‐azaindole)‐(7‐azaindole) heterodimer is theoretically investigated by the long‐range corrected time‐dependent density functional theory method and the complete‐active‐space second‐order perturbation theory method. The calculated potential energy profiles exhibit a lower barrier for the concerted mechanism in the locally excited state than for the stepwise mechanism through the charge‐transfer state. This result suggests that the ESDPT in the isolated heterodimer is likely to follow the former mechanism, as has been exhibited for the ESDPT in the homodimer of 7‐azaindole. © 2012 Wiley Periodicals, Inc.     

Theoretical study of the inner‐sphere energy barrier of the transition‐metal complex M(H2O) in electron‐transfer process

Two theoretical models, a reorganization model and an activation model, are presented for accurately determining the energy barrier of the type M(H₂O) of the transition‐metal complexes in the electron‐transfer process. Ab initio calculations are carried out at UMP2/6‐311G level for several redox pairs M(H₂O) (M=V, Cr, Mn, Fe, and Co) to calculate their inner‐sphere reorganization energies and activation energies according to the models presented in this article. The values of theoretical inner‐sphere reorganization energies and activational energies are comparable with the experimental results obtained from the vibration spectroscopic data. The theoretical reorganization energy of the every redox pair is four times as much as its activation energy, which agrees with Marcus' electron‐transfer theory. The fact proved that the theoretical models presented in this article are scientific and available for studying the electron‐transfer process of the transition‐metal complex. ©1999 John Wiley & Sons, Inc. Int J Quant Chem 75: 119–126, 1999     

Fe(NO3)3·9H2O as Efficient Catalyst for One‐pot Synthesis of Highly Functionalized Piperidines

Fe(NO₃)₃·9H₂O is used as an efficient and effective catalyst for the one‐pot three‐component synthesis of highly functionalized piperidines from aromatic aldehydes, anilines and b–ketoesters in ethanol at ambient temperature. This procedure includes some important aspects like the easy work‐up, no need to column chromatography, simple and readily available precursors, and good to high yields.     

An LC/MS method for the quantitative determination of 7α‐OH DHEA and 7β‐OH DHEA: an application for the study of the metabolism of DHEA in rat brain

Dehydroepiandrosterone (DHEA) is an important neurosteroid with neuronal protection and memory enhancement functions. 7α‐OH DHEA and 7β‐OH DHEA are the two important metabolites of DHEA in the brain. We have developed an LC/MS method to quantitatively analyze 7α‐OH DHEA and 7β‐OH DHEA. Chromatographic separation was carried out on a C₁₈ column with gradient elution using mobile phases of formic acid in acetonitrile and in water formic acid. Mass spectral detection was performed with a ThermoFinnigan LCQ advantage quadruple ion trap mass spectrometer with electrospray ionization. Positive ion chromatograms were acquired using single ion monitoring. The protonated molecule was 305 m/z, but the most abundant ion (269 m/z) was used for quantification. This method was validated and applied to investigate the 7‐hydroxylation of DHEA. When incubating DHEA with rat brain microsomes, both 7α‐OH DHEA and 7β‐OH DHEA were observed, but 7α‐OH DHEA was the major metabolite. Copyright © 2009 John Wiley & Sons, Ltd.     

Dehydration of the Sorel Cement Phase 3Mg(OH)2·MgCl2·8H2O studied by in situ Synchrotron X‐ray Powder Diffraction and Thermal Analyses

Dehydration is an important process which affects the chemical, physical and mechanical properties of materials. This article describes the thermal dehydration and decomposition of the Sorel cement phase 3Mg(OH)₂ · MgCl₂ · 8H₂O, studied by in situ synchrotron X‐ray powder diffraction and thermal analyses. Attention is paid on the determination of the chemical composition and crystal structure of the lower hydrates, identified as the phases 3Mg(OH)₂ · MgCl₂ · 5.4H₂O and 3Mg(OH)₂ · MgCl₂ · 4.6H₂O. The crystal structure of 3Mg(OH)₂ · MgCl₂ · 4.6H₂O is solved and refined by the Rietveld method and a structural model for the 3Mg(OH)₂ · MgCl₂ · 5.4H₂O phase is given. These phases show statistical distribution of water molecules, hydroxide and chloride anions positioned as ligands on the magnesium octahedra. A structural scheme of the temperature induced transformations in the thermal range from 25 to 500 °C is presented.     

Efficient CS Cross‐Coupling of Thiols with Aryl Iodides Catalyzed by Cu(OAc)2·H2O and 2,2′‐Biimidazole

The classical Ullmann C? S cross coupling reaction of aryl iodides with aromatic/alkyl thiols under catalysis of 15 mol% Cu(OAc)₂·H₂O and 15 mol% 2,2′‐biimidazole works at 80°C in DMSO for 3 h to provide a variety of aryl sulfides in good to excellent yields.     

Cell theory and equation‐of‐state of chain molecular systems: Application to polymer solids

We use the Lennard‐Jones and Devonshire cell theory without any ad hoc simplification of the cell potential to obtain the equation‐of‐state (EOS) for chain molecular systems. The interactions of the central segment with second and third shells of neighbors are taken into account. Numerical values of the cell integrals are given in tabular form along with interpolation expressions that cover the range of PVT variables appropriate to polymers. Results of comparison with EOS based on square‐well form are also discussed. Application of the theory to polymer glasses of diverse structures is found to be quite successful in explaining the PVT behavior over a wide range of temperatures both at atmospheric and elevated pressures. Further, scaled volume at the glass‐transition temperature is discovered to be a corresponding state property. Turning to crystals, the theory is generally in good accordance with the PVT data of three well‐studied polymers both at atmospheric and elevated pressures. For linear polyethylene the agreement is good up to 42 kbar for the room‐temperature isotherm. On the other hand, at higher temperatures where the data are limited to 5 kbar, the agreement is determined to be satisfactory for the three polymers. © 2001 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 39: 515–530, 2001     

On the ion‐pair dissociation mechanisms in the small NaCl·(H2O)6 cluster: A perspective from reaction path search calculations

We performed reaction path search calculations for the NaCl·(H₂O)₆ cluster using the global reaction route mapping (GRRM) code to understand the atomic‐level mechanisms of the NaCl → Na⁺ + Cl⁻ ionic dissociation induced by water solvents. Low‐lying minima, transition states connecting two local minima and corresponding intrinsic reaction coordinates on the potential energy surface are explored. We found that the Na Cl distances at the transitions states for the dissociation pathways were distributed in a relatively wide range of 2.7–3.7 Å and that the Na Cl distance at the transition state did not correlate with the commonly used solvation coordinates. This suggests that the definition of the transition states with specific structures as well as good reaction coordinate is very difficult for the ionic dissociation process even in a small water cluster. © 2018 Wiley Periodicals, Inc.     

The Plausible Motion's Confinement of Electrons by the Structure in YBa2Cu3O7‐x

A hypothesis is proposed that tryies to correlate the observed structure transitions of YBa₂Cu₃O_7‐x for x from 0 to 1 with measured super‐conductivity and electric properties.     

Test of variational transition state theory with multidimensional tunneling contributions against experimental kinetic isotope effects for the CHnD4−n + OH→P (n=0, 4) reactions

 Variational transition state theory including tunneling corrections (as implemented in Polyrate 8.7) and using multilevel energy calculations at the MCCM-CCSD(T)-1sc level for the CH₄ + OH reaction and at the MCCM-CCSD(T)-2m level for the CD₄ + OH process, reproduces very well the experimental rate constants. However, no single methodology was found that reproduces equally well the experimental rate constants for both title reactions. Received: 24 March 2002 / Accepted: 11 April 2002 / Published online: 4 July 2002