On relativistic effects in ground state potential curves of Zn2, Cd2, and Hg2 dimers. A CCSD(T) study

The ground state potential curves of the Zn2, Cd2, and Hg2 dimers calculated at different levels of theory are presented and compared with each other as well as with experimental and other theoretical studies. The calculations at the level of Dirac-Coulomb Hamiltonian (DCH), 4-component spin-free Hamiltonian, nonrelativistic Lévy-Leblond Hamiltonian and at the level of simple Coulombic correction to DCH are presented. The potential curves are calculated in an all-electron supermolecular approach including the correction to basis set superposition error (BSSE). Electron correlation is treated at the coupled cluster level including single and double excitations and noniterative triple corrections, CCSD(T). In addition, simulations of the temperature dependence of dynamic viscosities in the low-density limit using the obtained ground state potential curves are presented.     

Binding Energies of the π‐Stacked Anisole Dimer: New Molecular Beam—Laser Spectroscopy Experiments and CCSD(T) Calculations

Among noncovalent interactions, π–π stacking is a very important binding motif governed mainly by London dispersion. Despite its importance, for instance, for the structure of bio‐macromolecules, the direct experimental measurement of binding energies in π–π stacked complexes has been elusive for a long time. Only recently, an experimental value for the binding energy of the anisole dimer was presented, determined by velocity mapping ion imaging in a two‐photon resonant ionisation molecular beam experiment. However, in that paper, a discrepancy was already noted between the obtained experimental value and a theoretical estimate. Here, we present an accurate recalculation of the binding energy based on the combination of the CCSD(T)/CBS interaction energy and a DFT‐D3 vibrational analysis. This proves unambiguously that the previously reported experimental value is too high and a new series of measurements with a different, more sensitive apparatus was performed. The new experimental value of 1800±100 cm^?1 (5.15±0.29 kcal mol^?1) is close to the present theoretical prediction of 5.04±0.40 kcal mol^?1. Additional calculations of the properties of the cationic and excited states involved in the photodissociation of the dimer were used to identify and rationalise the difficulties encountered in the experimental work.     

Gibbs energy of activation for thermal isomerization of (1Z)‐acetaldehyde hydrazone and (1Z)‐acetaldehyde N,N‐dimethylhydrazone by Gaussian‐4 theory and CCSD(T)/CBS computations

In this article, we examined the Gibbs energy of activation for the Z/E thermal isomerization reaction of (1Z)‐acetaldehyde hydrazone and (1Z)‐acetaldehyde N,N‐dimethylhydrazone, at 298.15 K in the solvent of cyclohexane. We carried out computations employing both the Gaussian‐4 (G4) theory and the coupled cluster method using both single and double substitutions and triple excitations noniteratively, CCSD(T). The CCSD(T) energy is extrapolated to the complete basis set (CBS). We compared the calculated results to the available experimental observation. It appeared that both G4 and CCSD(T)/CBS computations overestimated the experimental value by as much as about 6 and 12 kcal/mol in the present two cases. We discussed possible sources of error and proposed the experimental kinetic data could be questionable. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2009     

Basis sets for the evaluation of van der Waals complex interaction energies: Ne–N2 intermolecular potential and microwave spectrum

In order to obtain efficient basis sets for the evaluation of van der Waals complex intermolecular potentials, we carry out systematic basis set studies. For this, interaction energies at representative geometries on the potential energy surfaces are evaluated using the CCSD(T) correlation method and large polarized LPol‐n and augmented polarization‐consistent aug‐pc‐2 basis sets extended with different sets of midbond functions. On the basis of the root mean square errors calculated with respect to the values for the most accurate potentials available, basis sets are selected for fitting the corresponding interaction energies and getting analytical potentials. In this work, we study the Ne–N₂ van der Waals complex and after the above procedure, the aug‐pc‐2–3321 and the LPol‐ds‐33221 basis set results are fitted. The obtained potentials are characterized by T‐shaped global minima at distances between the Ne atom and the N₂ center of mass of 3.39 Å, with interaction energies of ?49.36 cm^?1 for the aug‐pc‐2–3321 surface and ?50.28 cm^?1 for the LPol‐ds‐33221 surface. Both sets of results are in excellent agreement with the reference surface. To check the potentials further microwave transition frequencies are calculated that agree well with the experimental and the aV5Z‐33221 values. The success of this study suggests that it is feasible to carry out similar accurate calculations of interaction energies and ro‐vibrational spectra at reduced cost for larger complexes than has been possible hitherto. © 2013 Wiley Periodicals, Inc.     

Revealing the physical nature and the strength of charge‐inverted hydrogen bonds by SAPT(DFT), MP2, SCS‐MP2, MP2C,and CCSD(T) methods

The physical nature of charge‐inverted hydrogen bonds in H₃XH YH₃ (X = Si, Ge; Y = Al, Ga) dimer systems is studied by means of the SAPT(DFT)‐based decomposition of interaction energies and supermolecular interaction energies based on MP2, SCS‐MP2, MP2C, and CCSD(T) methods utilizing dimer‐centered aug‐cc‐pCVnZ (n = D, T, Q) basis sets as well as an extrapolation to the complete basis set limit. It is revealed that charge‐inverted hydrogen bonds are inductive in nature, although dispersion is also important. Computed interaction energies form the following relation: . It is confirmed that the aug‐cc‐pCVDZ basis set performs poorly and that very accurate values of interaction and dispersion energies require basis sets of at least quadrupole‐ζ quality. Considerably large binding energies suggest potential usefulness of charge‐inverted hydrogen bonds as an important structural motif in molecular binding. Terminology applying to σ‐ and π‐hole interactions as well as to triel and tetrel bonds is discussed. According to this new terminology the charge‐inverted hydrogen bond would become the first described case of a hydride‐triel bond. © 2017 Wiley Periodicals, Inc.     

Meta‐linked and para‐linked water‐soluble poly(arylene ethynylene)s with amino acid side chains: Effects of different linkage on Hg2+ ion sensing properties in aqueous media

Water‐soluble, meta‐ and para‐linked poly(arylene ethynylene)s containing L ‐aspartic acid‐functionalized fluorene units (P1 and P2) and their model compounds (M1 and M2) have been synthesized, and their photophysical properties and fluorescent sensing properties were investigated in aqueous solution. P1 and M1 with the meta‐linkage show blue‐shifted absorption and emission spectra, and decreased photoluminescence quantum yields compared with those of P2 and M2 with para‐linkage. Their absorption and fluorescence spectra are pH dependent perhaps due to the aggregation of the polymer chains at low pH values. In buffer solutions, both polymers and their model compounds exhibit the excellent selectivity and sensitivity to Hg²⁺ over other common metal ions. Furthermore, the quenching constant and detection limit of P1 are determined to be 1.04 × 10⁷ M^?1 and 10 nM, and show the higher sensitivity compared to P2. Further comparison of their model compounds reveal that the sensitivity and quenching efficiency of M1 is also higher than that of M2, indicating that the meta‐linkage pattern plays a key role in improving their Hg²⁺ ion sensing properties. In addition, both meta‐ and para‐linked polymers exhibit the higher quenching efficiency than their model compounds due to the amplified fluorescence response of conjugated polymer. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

One‐bond 29Si‐1H spin‐spin coupling constants in the series of halosilanes: benchmark SOPPA and DFT calculations,relativistic effects,and vibrational corrections

A number of most representative second order polarization propagator approach (SOPPA) based wavefunction methods, SOPPA, SOPPA(CC2) and SOPPA(CCSD), and density functional theory (DFT) based methods, B3LYP, PBE0, KT2, and KT3, have been benchmarked in the calculation of the one‐bond ²⁹Si‐¹H spin‐spin coupling constants in the series of halosilanes SiH_nX_4?n (X = F, Cl, Br, I), both at the non‐relativistic and full four‐parameter Dirac's relativistic levels taking into account vibrational corrections. At the non‐relativistic level, the wavefunction methods showed much better results as compared with those of DFT. At the DFT level, out of four tested functionals, the Perdew, Burke, and Ernzerhof's PBE0 showed best performance. Taking into account, relativistic effects and vibrational corrections noticeably improves wavefunction methods results, but generally worsens DFT results. Copyright © 2013 John Wiley & Sons, Ltd.     

Titanium (IV) complexes of some tetra‐dentate symmetrical bis‐Schiff bases of 1,6‐hexanediamine: Synthesis,characterization, and in silico prediction of potential inhibitor against coronavirus (SARS‐CoV‐2)

Symmetrical bis‐Schiff bases (LH ₂) have been synthesized by the condensation of 1,6‐hexanediamine (hn) and carbonyl or dicarbonyl. One of the synthesized Schiff bases has been subjected to the molecular docking for the prediction of their potentiality against coronavirus (SARS‐CoV‐2). Molecular docking revealed that tested Schiff base possessed high binding affinity with the receptor protein of SARS CoV‐2 compared with hydroxychloroquine (HCQ). The ADMET analysis showed that ligand is non‐carcinogenic and less toxic than standard HCQ. Schiff bases acting as dibasic tetra‐dentate ligands formed titanium (IV) complexes of the type [TiL(H₂O)₂Cl₂] or [TiL(H₂O)₂]Cl₂ being coordinated through ONNO donor atoms. Ligands and complexes were characterized by the elemental analysis and physicochemical and spectroscopic data including FTIR, ¹H NMR, mass spectra, UV‐Visible spectra, molar conductance, and magnetic measurement. Optimized structures obtained from quantum chemical calculations supported the formation of complexes. Antibacterial, antifungal, and anti‐oxidant activity assessments have been studied for synthesized ligands and complexes.     

ChemInform Abstract: Analysis of Electronic Structures and Chemical Bonding of Metal‐Rich Compounds. Part 2. Presence of Dimer (T—T)4‐ and Isolated T2‐ Anions in the Polar Intermetallic Cr5B3‐Type Compounds AE5T3 (AE: Ca,Sr; T: Au,Ag, Hg,Cd, Zn).

ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.     

Masking of Lewis acidity trends in the solid‐state structures of trichlorido‐ and tribromido(2,2′:6′,2′′‐terpyridine‐κ3N,N′,N′′)gallium(III)

The molecular structures of trichlorido(2,2′:6′,2′′‐terpyridine‐κ³N,N′,N′′)gallium(III), [GaCl₃(C₁₅H₁₁N₃)], and tribromido(2,2′:6′,2′′‐terpyridine‐κ³N,N′,N′′)gallium(III), [GaBr₃(C₁₅H₁₁N₃)], are isostructural, with the Ga^III atom displaying an octahedral geometry. It is shown that the Ga—N distances in the two complexes are the same within experimental error, in contrast to expected bond lengthening in the bromide complex due to the lower Lewis acidity of GaBr₃. Thus, masking of the Lewis acidity trends in the solid state is observed not only for complexes of group 13 metal halides with monodentate ligands but for complexes with the polydentate 2,2′:6′,2′′‐terpyridine donor as well.