Gas-phase conformations and exciton couplings in 5,6,11,12-tetrahydrodibenzo[a,e]cyclooctene

The conformations and exciton couplings in 5,6,11,12-tetrahydrodibenzo[a,e]cyclooctene (THDC) have been studied using resonance-enhanced two-photon ionization spectroscopy in a supersonic jet expansion. It has been estimated from the spectral analysis that 90% of THDC exists in the twist-boat (TB) conformation; the chair (C) conformer constitutes the remaining 10%. Most of the vibronic activity in the spectrum of THDC is associated with the symmetric flapping of the aromatic rings of the TB conformer. The observed S₁/S₂ exciton splitting of the TB conformer is 100 cm^?1. The S₁/S₂ transition of the C conformer is found to be forbidden. The exciton splittings of the C and TB conformers were estimated by the spectral analysis of two deuterated isotopomers of THDC. The estimated exciton splittings of the C and TB conformers are 14.7 and 101.9 cm^?1, respectively. The supramolecular model of bichromophores with identical chromophores at the CIS/6-31+G(d)//HF/6-31+G(d) level of theory predicted electronic coupling energies that are very close to the experimental exciton coupling energies.     

Double resonance spectroscopy of different conformers of the neurotransmitter amphetamine and its clusters with water

In this paper the conformational landscape of amphetamine in the neutral ground state is examined by both spectroscopy and theory. Several spectroscopic methods are used: laser-induced fluorescence (LIF), resonance-enhanced two-photon ionization (R2PI), dispersed fluorescence and IR/R2PI hole burning spectroscopy. The latter two methods provide for the first time vibrationally resolved spectra of the neutral ground state of dl-amphetamine and the amphetamine–(H₂O)_1,2 complexes. Nine stable conformers of the monomer were found by DFT (B3LYP/6-311++G(d,p)) and ab initio (MP2/6-311++G(d,p)) calculations. For conformer analysis the vibrations observed in the IR/R2PI hole burning and dispersed fluorescence spectra obtained from single vibronic levels (SVLF) of a selected conformer were compared with the results of an ab initio normal mode analysis. By this procedure three S₀ → S₁ transitions in the R2PI spectrum were assigned to three different conformer structures. Another weak transition earlier attributed to another conformer could be assigned to a vibronic band of one of the three conformers. Furthermore spectra of amphetamine–(H₂O)_1,2 are tentatively assigned.     

Conformations of 2-aminoindan in a supersonic jet: the role of intramolecular N-H...pi hydrogen bonding

Laser-induced fluorescence (LIF), dispersed fluorescence (DF), mass-resolved one-color resonance enhanced two-photon ionization (RE2PI) and UV-UV hole-burning spectra of 2-aminoindan (2-AI) were measured in a supersonic jet. The hole-burning spectra demonstrated that the congested vibronic structures observed in the LIF excitation spectrum were responsible for three conformers of 2-AI. The origins of the conformers were observed at 36931, 36934, and 36955 cm(-1). The DF spectra obtained by exciting the band origins of the three conformers showed quite similar vibrational structures, with the exception of the bands around 600-900 cm(-1). The molecular structures of the three conformers were assigned with the aid of ab initio calculations at the MP2/6-311+G(d,p) level. An amino hydrogen of the most stable conformer points toward the benzene ring. The stability of the most stable conformer was attributed to an intramolecular N-H...pi hydrogen bonding between the hydrogen atom and the pi-electron of the benzene ring. The other two conformers, devoid of intramolecular hydrogen bonding, were also identified for 2-AI. This suggests weak hydrogen bonding in the most stable conformer. The intramolecular N-H...pi hydrogen bonding in 2-AI was discussed in comparison with other weak hydrogen-bonding systems.     

S1←S0 Vibronic spectrum and structure of 2,2-difluoroethanal in the S1 state

The vibronic spectrum of the 2,2-difluoroethanal vapor was recorded using a multipass optical cell with an optical length of at least 140 m. The spectrum in the region of 300—364 nm was assigned to the S₁S₀ electronic transition (from the ground S₀ to the first excited singlet S₁ electronic state); the vibrational structure of the spectrum was analyzed. The spectrum bands were assigned to two systems of vibronic transitions, namely, transitions between the levels of the cis-conformer (S₀) and of the S₁ conformers, with the origins (0₀ ⁰ transitions between the zero vibrational levels of conformers) at 29192 and 29087 cm^–1, respectively. Analysis of the spectrum showed that the S₁S₀ electronic excitation of the cis-conformer was followed by rotation of the CHF₂ top and pyramidal distortion of the carbonyl fragment. A number of fundamental frequencies were found for S₁ conformers, in particular, torsion and inversion energy levels. The experimental data are in satisfactory agreement with the results of quantum-chemical calculations for the 2,2-difluoroethanal molecule in the S₀ and S₁ states.     

Discrimination of two low-energy conformers of octahydroanthracene in supersonic jet

The S₀ and S₁ states’ vibronic features of two low-energy conformers of octahydroanthracene have been investigated by laser induced fluorescence excitation, dispersed emission and UV–UV hole burning spectroscopy in a cold seeded jet. UV–UV hole burning spectra have been used to distinguish the two conformers and their S₁ state vibrational modes. In addition, semi-empirical and ab initio calculations have been performed to correlate the calculated S₀ frequencies of vibrational modes with the experimental results. It is found that the observed spectra correspond well with sym-twist (a) (C_2h) and antisym-twist (b) (D₂) forms.     

Vibronic coupling and intramolecular dynamics of pyrene as revealed by the S0→S2 excitation spectrum in a supersonic jet

The fluorescence excitation spectrum of pyrene obtained in a supersonic jet for the S₀→S₂ transition shows a complicated structure due to the interaction of discrete levels of S₂ with the quasi-continuous levels belonging to S₁. The intensity distribution pattern in this region has been evaluated from quantum-mechanically calculated quantities, such as the vibronic coupling integrals, and Franck-Condon factors deduced from independent experiments. The dynamics in pyrene following excitation into S₂ are discussed.     

High pressure FTIR study of intramolecular hydrogen bonding and conformation of a small peptide in solution

Effect of pressure on conformational equilibria of a small peptide N-acetyl-l-Pro-l-Leu-Gly-NH₂ in a chloroform solution has been studied by FTIR spectroscopy. Absorption in the NH stretching region was measured at pressures in the 1–1080 bar range and at 296 K, and decomposed into component bands by least-squares fitting. Intensity ratios of bands which were assigned to a hydrogen-bond-free conformer and intramolecularly hydrogen-bonded conformers with 10- and 13-membered hydrogen bonded rings, respectively, were examined as a function of pressure. It was found that the conformer with the 13-membered ring has definitely smaller partial molar volume than the other two conformers which have nearly the same volume with each other. On the basis of a simple dielectric model, we have shown that the conformer with the 13-membered hydrogen-bonded ring has a considerably large dipole moment which is consistent with the α-helical structure suggested by the previous variable-temperature FTIR study.     

Two-color multiphoton ionization of diazabicyclooctane in a supersonic free jet

Two-color multiphoton ionization (MPI) spectroscopy has been applied for diazabicyclooctane (DABCO) in a supersonic free jet. The MPI spectra due to transitions from the various vibronic levels of the S₁ (3s Rydberg) state which were excited by the first laser revealed the high Rydberg states above the adiabatic ionization potential. The ionization process and the vibrational potential of the ion are discussed.     

Dispersed fluorescence spectroscopy of primary and secondary alkoxy radicals

Dispersed fluorescence (DF) spectra of 1-propoxy, 1-butoxy, 2-propoxy, and 2-butoxy radicals have been observed under supersonic jet cooling conditions by pumping different vibronic bands of the B-X laser induced fluorescence excitation spectrum. The DF spectra were recorded for both conformers of 1-propoxy, three conformers of the possible five of 1-butoxy, the one possible conformer of 2-propoxy, and two conformers of the possible three of 2-butoxy. Analysis of the spectra yields the energy separations of the vibrationless levels of the ground X and low-lying A electronic state as well as their vibrational frequencies. In all cases, the vibrational structure of the DF spectra is dominated by a CO stretch progression yielding the nuCO stretching frequency for the X state and in most cases for the A state. In addition to the experimental work, quantum chemical calculations were carried out to aid the assignment of the vibrational levels of the X state and for some conformers the A state as well. Geometry optimizations of the different conformers of the isomers were performed and their energy differences in the ground states were determined. The results of the calculation of the energy separations of the close-lying X and A states of the different conformations are provided for comparison with the experimental observations.     

Conformational interconversions in supersonic jets: Matrix IR spectroscopy and model calculations

Terminal conformer populations in supersonic molecular beams have been measured by use of matrix IR spectroscopy. the experimental technique is based on trapping of the beam molecules in to a cryogenic matrix. The ratio of conformational isomers is determined by comparing intensity ratios of infrared absorption bands with those found in analogous experiments with thermal effusive molecular beams. supersonic beams of pure 1,2-difluoroethane a considerable depopulation fo the less stable trans conformer is found, the lowest terminal conformational temperature reached being T_c^t8 = 207 (3) K. In seeded argon beams the cooling of the conformational distribution was found to be weaker. In supersonic beams of 1,2-dichloroethane and of methyl nitrite no significant conformational cooling was found. The experimental results are discussed in terms of a kinetic model of conformational interconversion in the flow field of a continuum free jet. The calculation indicate that conformational cooling by supersonic expansion may be expected only for molecules with a low energy barrier to internal rotation.     

Clathrate and inclusion compounds. 14. Variable temperature vibrational spectroscopic studies of monosubstituted cyclohexane guests in thiourea

Infrared and Raman spectra over the temperature range room temperature to 74K have been recorded for a range of inclusion compounds of thiourea containing monosubstituted cyclohexanes C₆H₁₁X (X =Cl,Br,I,CN,NCO) as guests. The liquid phase of all the cyclohexanes consists of an equilibrium mixture of axial and equatorial conformers, with the equatorial conformer being the more abundant. At room temperature the chloro, bromo and cyano substituted guests exist predominantly as the axial conformer, whereas the iodo and isocyanato substituted guests exist as a mixture of both conformers, but with the axial conformer being the more abundant. The iodocyclohexane inclusion compound was the only one to display a temperature dependent change in the intensity ratio of the conformer bands. This could be due to a change in the conformer ratio or to a structural phase change. J. E. D. Davies and V. A. Tabner,J. Incl. Phenom.,31, 99 (1998). Translated fromZhurnal Strukturnoi Khimii, Vol. 40, No. 5, pp. 988–992, September–October, 1999.     

Conformational relaxation of S-(+)-carvone and R-(+)-limonene studied by microwave Fourier transform spectroscopy and quantum chemical calculations

S-(+)-carvone (C₁₀H₁₄O, 5-isopropenyl-2-methylcyclohex-2-en-1-one) and R-(+)-limonene (C₁₀H₁₆, 4-isopropenyl-1-methylcyclohexene) have been characterized in the gas phase using a Fourier transform microwave spectrometer coupled to a supersonic molecular beam. Two conformers—with the isopropenyl group in the equatorial position—have been detected for each compound and described by a set of molecular parameters including the principal rotational constants and the quartic centrifugal distortion parameters. Quantum chemical calculations indicate that a third conformer might not be observed due to relaxation processes in the jet. The gas phase results are compared with the liquid phase IR-Raman-VCD spectra.     

Rotational Spectroscopy of 2-Furoic Acid and Its Dimer: Conformational Distribution and Double Proton Tunneling

Structural and tunneling properties of the 2-furoic acid (FA) monomer and dimer were investigated using rotational spectroscopy and DFT calculations. CREST, a conformational ensemble space exploration tool, was used to identify all possible low-energy conformations of the FA monomer and dimer, followed by the DFT geometry optimization and harmonic frequency calculations. Broadband rotational spectra in the 2–6 and 8–12 GHz regions were recorded in a supersonic jet expansion. The monomeric FA was found to exist dominantly as three different conformers: I , II , and III in a jet, with I and II taking on the cis-COOH configuration while III having the trans-COOH configuration. For the FA dimer, only the I – II conformer was observed experimentally, whereas the symmetric I – I and II – II conformers were not observed because of their zero dipole moments. The analysis of the splittings in the rotational transitions of I – II allowed one to extract the tunneling splitting to be 1056.0(12) MHz. The barrier height was determined to be ∼442 cm⁻¹ using the scaled potential energy scans at several different levels of theory.     

Theoretical investigations on structure, electrostatics potentials and vibrational frequencies of Li+ - CH3- O- (CH2- CH2- O)n- CH3 (n=3-7) conformers

Electronic structure, charge distributions and vibrational characteristics of CH₃ O(CH₂ CH₂ O) _n CH₃ (n=3-7) have been derived using the ab initio Hartree Fock and density functional calculations. For tri- to hexaglymes the lowest energy conformers have trans- conformation around the C-C and C-O bonds of the backbone. For heptaglyme (n=7 in the series), however, gauche-conformation around the C-C bonds renders more stability to the conformer and turns out to be 10.1 kJ mol ⁻¹ lower in energy relative to the conformer having trans-orientation around the C-C and C-O bonds. The molecular electrostatic potential topographical investigations reveal deeper minima for the ether oxygen in conformers having the gauche conformation around the C-C bonds over those for the trans- conformers. A change from trans- to gauche-conformation around the C-C bonds of the lowest energy conformer of heptaglyme engenders a triplet of intense bands ∼1,150 cm ⁻¹ in the vibrational spectra. Theoretical calculations predict that Li ⁺ binds strongly to the heptaglyme conformer in the above series. The frequency shifts in the vibrational spectra of CH₃O(CH₂CH₂O) _n CH₃- Li⁺ (n=3-7) conformers have been discussed     

The pure rotational spectrum of cyclobutane-d1 observed by microwave Fourier transform spectroscopy

Pure rotational transitions of both equatorial and axial conformers of cyclobutane-d₁ in their vibronic ground state have been observed between 12 and 40 GHz with a pulsed microwave Fourier transform (MWFT) spectrometer. Twenty-four transitions of the equatorial as well as 29 transitions of the axial conformer with J⩽40 have been measured. Their assignment has been confirmed by microwave-microwave double-resonance experiments. Rotational constants and the quartic centrifugal distortion constants have been determined for both conformers from the measured frequencies. The r₀ structure has been deduced from these rotational constants.     

Comparative analysis of the vibrational structure of the absorption spectra of acrolein in the excited (<Emphasis Type="Italic">S</Emphasis><Subscript>1</Subscript>) electronic state

The assignments of absorption bands of the vibrational structure of the UV spectrum are compared with the assignments of bands obtained by the CRDS method in a supersonic jet from the time of laser radiation damping for the trans isomer of acrolein in the excited (S ₁) electronic state. The ν_00trans = 25861 cm⁻¹ values and fundamental frequencies, including torsional vibration frequency, obtained by the two methods were found to coincide in the excited electronic state (S ₁) for this isomer. The assignments of several absorption bands of the vibrational structure of the spectrum obtained by the CRDS method were changed. Changes in the assignment of (0-v′) transition bands of the torsional vibration of the trans isomer in the Deslandres table from the ν_00trans trans origin allowed the table to be extended to high quantum numbers v′. The torsional vibration frequencies up to v′ = 5 were found to be close to the frequencies found by analyzing the vibrational structure of the UV spectrum and calculated quantum-mechanically. The coincidence of the barrier to internal rotation (the cis-trans transition) in the one-dimensional model with that calculated quantum-mechanically using the two-dimensional model corresponds to a planar structure of the acrolein molecule in the excited (S ₁) electronic state.     

Rationalizing nuclear overhauser effect data for compounds adopting multiple-solution conformations

An algorithm is described for refining the populations of a set of multiple-solution conformers using experimental nuclear Overhauser effects (nOes). The method is based upon representing the effective relaxation matrix for the set of interconverting proposed conformers as a linear combination of relaxation matrices (LCORMs) due to each conformer. The conformer population derivative of the nOe is derived from a Taylor series expression for the calculated nOe. This derivative may then be used in a standard nonlinear least-squares refinement procedure. The LCORM nOe procedure is tested using a monosaccharide system, 1-O-methyl-α-L -iduronate, that is known to exhibit conformational variability. The measured nOes for this system are used to refine the populations of a set of three static conformers, namely, the ¹C₄, ⁴C₁, and ²S₀ ring conformers. The populations thus derived are compared to those previously obtained using nuclear magnetic resonance proton-proton coupling constant information. Two possible extensions to the method are discussed: The first uses combined nOe and coupling constant data while the second removes the restrictions that the conformers used for fitting be rigid entities. © 1994 by John Wiley & Sons, Inc.     

光腔衰荡光谱研究PH2自由基在465-555nm的光谱

Absorption spectra of jet-cooled PH₂ radicals were recorded in the wavelength range of 465-555 nm using cavity ringdown spectroscopy. The PH₂ radicals were produced in a supersonic jet by pulsed direct current discharge of a mixture of PH₃ and SF₆ in argon. Seven vibronic bands with fine rotational structures have been observed and assigned as 0⁰₀、2ⁿ₀、2ⁿ₁(n=1-3) bands of the ?²A₁- Χ²B₁ electronic transition. Rotational assignments and rotational term values for each band were re-identified, and the molecular parameters including rotational constants, centrifugal distortion constants, and spin-rotation interaction constants were also improved with reasonably high precision. In addition, large perturbations observed in each quantum number of total angular momentum of the a axis level of the excited vibronic stateswere briefly discussed.     

Investigation of an Olfactoryly Active Ring-Like Conformer of a Chain-Type Odorant, (3S)-3,7-dimethyloctanal,by computer calculation and graphics

The odor of (3S)-3,7-dimethyloctanal, a chain-type odorant, has some resemblance to that of ethyl (1 R, 6S)-2,2,6-trimethylcyclohexane-1-carboxylate, a ring-type odorant. We investigated the ring-like conformers of (3S)-3,7-dimethyloctanal. Two approaches, (i) systematic conformational analysis and (ii) construction of the initial structure by referring to the structure of the ring-type odorant, were considered in the search for ring-like conformers of the chain-type odorant. As a result, it was found that two stable ring-like conformers of (3S)-3,7-dimethyloctanal, obtained from the two approaches, resembled conformers of ethyl (1R, 6S)-2,2,6-trimethylcyclohexane-1-carboxylate in their three-dimensional structural features. The shapes of the two ring-like ones were not exactly the same but were quite similar. Therefore, the two ring-like conformers were considered to approximate the olfactoryly active conformer that binds and stimulates the same odor receptor as that for ethyl (1R,6S)-2,2,6-trimethylcyclohexane-1-carboxylate. In addition, ring-like conformers of another chain-type odorant, 2-methylpent-2-enal, were investigated to check the validity of the calculation method used.