多阶F指数对碳氢化合物的QSPR研究

根据分子中原子与原子的不同邻接情况,重新定义了关联矩阵的矩阵元,并在此基础上定义了矩阵形式的多阶F指数 pF.多阶F指数 pF考虑了分子中每一顶点原子的特性及顶点原子与其它原子的多种相互作用.采用系列指数 pF中的F, 0F′, 1F′和 2F′对烷烃、烯烃、烷基苯共144个碳氢化合物的标准生成焓进行相关研究,相关系数均大于0.98,与卤化钛化合物TiXn (n=1～4, X=F, Cl, Br, I)的标准生成焓的相关系数也在0.99以上.     

扩展的距离矩阵指数W~*及其应用研究

重新定义了距离矩阵及距离矩阵拓扑指数W~*，该定义考虑分子中每一原子的 性质和成键情况以及分子中每一原子与所有其它原子的结合情况。拓扑指数W~*对 于饱和碳氢体系可还原为Wiener的距离矩阵指数W，同时，W~*还可一般地应用于含 多重键及杂质原子的有机体系和无机体系。本研究用W~*相关的卤代甲烷标准生成 焓、SiX_n（X = F，Cl，Br，I，n = 1～4）体系的标准生成焓，相关系数均在0. 99以上，置信度大于99.9%。并用W~*研究了含苯环的碳氢体系气相色谱保留指数， 含氧原子的醛酮体系的标准生成焓以及卤代苯体系的辛醇/水分配系数。对饱和碳 氢体，W为W~*的特殊形式。     

Wiener指数的新定义及其对气相色谱保留指数的相关性研究

1引言 Wiener于1947年提出的距离矩阵指数W，是世界上第一个分子拓扑指数，但由于Ⅳ所含信息较少，限制了Wiener指数在更广泛领域的应用。许多学者对此进行了改进并提出了许多距离矩阵指数，如Hosoya指数、Detour指数、Harary指数等。但是这些指数缺少分子结构中杂原子、多重键等信息，其应用仍然仅限于碳氢化合物。本研究采用原子的拓扑能量重新定义Wiener矩阵的矩阵元，将杂原子的信息引入Wiener指数中，重新定义Wiener指数为形^＋，并利用W^＋指数研究含杂原子胺、硫醚、卤代烷类化合物的气相色谱保留指数砌，将距离矩阵指数的应用扩展到含杂原子的体系。     

饱和链烃类化合物的物理化学性质的分子拓扑研究

从距离矩阵和原子的支化度出发,提出了一种新的拓扑指数,计算结果表明,它具有良好的结构选择性和性质相关性。     

化合物结构／性质相关的研究／拓扑指数法（Ⅰ）

本文提出一种新的拓扑指数－ＥＡ系列指数，它是从表示分子图形的邻接矩阵出发，结合图形中顶点的度构造成ＥＡ矩阵，计算ＥＡ矩阵的本征值，求出本征值绝对值和指数ＥＡΣ及本征值绝对值最大值指数ＥＡｍａｘ，实验表明，ＥＡ系列指数具有良好的唯一性和相关性。     

一种新的拓扑指数用于饱和链烃类化合物的结构/性质相关性研究

本文从距离矩阵出发, 结合分子中各原子的支化度, 产生一种新的拓扑指数Y~x, 并将它用于研究饱和链烃类化合物的理论性质, 获得了比较满意的结果。与其它已有的拓扑指数比较, 该指数具有良好的结构选择性和相关性。     

晶格能的键参数拓扑指数关联

拓扑指数或分子连通性指数法在研究有机化合物结构与性能关系方面,已作了大量工作,并得到了广泛的应用。拓扑指数只与分子的几何结构有关,而不考虑原子的性质;键参数法虽然研究无机化合物结构与性能方面已获得了巨大的成功,但键参数法只考虑原子的性质,而不考虑分子的几何结构,使它们的应用受到了一定的限制。Berysz,张宏光和辛厚文等在将键参数和拓扑指数结合起来方面和了有益的尝试。本文提出了一种将分子的几何结构与组成分子的原子性质较好结合起来的键参数拓扑指数。     

计算机自动结构解析专家系统研究──一个新的拓扑等价性识别算法

介绍了一个正确识别化合物结构或结构片断中各原子的拓扑等价性问题的新算法。算法中引入了节点矩阵Ｎ和键矩阵Ｂ，并由这两个新矩阵来计算化合物结构图中的各节点的特征值，以此来表征节点的环境特征，从而识别节点的拓扑等价性，以保证结构解析专家系统结构产生器的穷举和非冗余性。     

拓扑量子方法估算多环芳香烃类化合物的电离能

分子图的邻接矩阵是分子的拓扑不变量,它与分子的结构型性质如电离能等有关.以往的研究工作[1]在构建邻接矩阵时一般不考虑顶点(原子)本身的性质,而将矩阵的主对角元规定为0.本文以多环芳香烃化合物为模型,在构建邻接矩阵的主对角元时,结合烷基极化效应指数(PEI)来考虑分子图顶点的性质,用拓扑量子方法构建多环芳香烃类化合物新的邻接矩阵[2],在邻接矩阵与电离能之间建立某种新的联系.例如,苯分子(C6H6)的邻接矩阵,以往的分子拓扑方法,在构建分子图顶点邻接矩阵时,忽略顶点本身的性质,将主对角元均定为0,如矩阵A所示,当考虑顶点的相对能量,即以CH的∑PEI=0.6243代入主对角元,得到新的邻接矩阵,如矩阵B所示.     

不同极性固定相脂肪醇色谱保留指数QSRR研究

在分子拓扑化学理论基础上,根据脂肪醇分子中各原子特性,在距离矩阵基础上使用分子中原子的平衡电负性对分子图进行着色,构建了新的拓扑指数1Tp和2Tp,并对25个脂肪醇在6种不同极性固定相的色谱保留指数(RI)进行QSRR研究。6个拓扑模型的相关系数R均大于0.9872,得到的实验值与计算值的平均相对误差均小于2%,在实验范围以内。该拓扑指数物理意义明确,较好地描述了脂肪醇分子中各原子的电负性效应、支化效应、氢键缔合效应及空间效应,用于研究色谱保留指数,结果令人满意。同时对拓扑模型采用留一交叉检验法(leave-one-out cross-validation,LOO-CV)和外检验相结合的方法进行测试,测试结果显示模型具有良好稳定性和较强的预测能力。     

On the angular correlation of electrons in configuration interaction wavefunctions

In a recent study of angular correlation of electrons in the ground state of the helium atom was examined using both configuration interaction (CI) and Hylleraas wavefunctions. It was concluded that little reliance should be placed on properties involving angular correlation which are derived from CI wavefunctions. In contradiction with this conclusion, we have observed a rapid convergence of the natural orbital CI expansion to the correct angular correlation behavior of the Kinoshita helim atom wavefunction.     

2-亚胺-1,10-邻二氮杂菲铁(Ⅱ)类催化剂活性与中心金属原子净电荷的关系

应用金属原子净电荷相关性(MANCC)方法研究了铁(Ⅱ)类催化剂活性. 取代基的电子效应占主导作用的催化剂, 活性与中心金属原子净电荷有较好的相关性. 当取代基呈供电子效应时, 催化剂活性随着电荷的增大而升高, 当取代基呈吸电子效应时, 催化剂活性随着电荷的增大而降低. 在此基础上推测烯烃聚合反应催化过程中可能存在两种不同的活性中心, 一种是[LFe-R]⁺, 另一种是[LFe-R]²⁺或[Fe(Cl)RL]⁺. 当取代基的电子效应和空间效应均对活性有影响时, 发现催化剂的两卤素净电荷差值越小, 催化活性越强.     

Nonuniversality of commonly used correlation-energy density functionals

The correlation energies of the helium isoelectronic sequence and of Hooke's atom isoelectronic sequence have been evaluated using an assortment of local, gradient, and metagradient density functionals. The results are compared with the exact correlation energies, showing that while several of the more recent density functionals reproduce the exact correlation energies of the helium isoelectronic sequence rather closely, none is satisfactory for Hooke's atom isoelectronic sequence. It is argued that the uniformly acceptable results for the helium sequence can be explained through simple scaling arguments that do not hold for Hooke's atom sequence, so that the latter system provides a more sensitive testing ground for approximate density functionals. This state of affairs calls for further effort towards formulating correlation-energy density functionals that would be truly universal at least for spherically symmetric two-fermion systems.     

Determination of octanol-water partition coefficient for terpenoids using reversed-phase high-performance liquid chromatography

Octanol-water partition coefficients (Kow) for 57 terpenoids were measured using a RP-HPLC method. Sample detection was achieved with standard UV and refractive index detectors and required no special column treatment. Measured log Kow values for the terpenoids ranged from 1.81 to 4.48 with a standard error of between 0.03 and 0.08 over the entire range. Partition coefficients determined by the RP-HPLC method were compared against shake flask, atom/fragment contribution, fragment and atomistic methods. The HPLC values were found to give the best correlation with shake flask results. Log Kow values calculated by the atom/fragment contribution method gave the best correlation with the HPLC values when compared to fragment and atomistic methods.     

ADME evaluation in drug discovery. 2. Prediction of partition coefficient by atom-additive approach based on atom-weighted solvent accessible surface areas

A novel method for the calculations of 1-octanol/water partition coefficient (log P) of organic molecules has been presented here. The method, SLOGP v1.0, estimates the log P values by summing the contribution of atom-weighted solvent accessible surface areas (SASA) and correction factors. Altogether 100 atom/group types were used to classify atoms with different chemical environments, and two correlation factors were used to consider the intermolecular hydrophobic interactions and intramolecular hydrogen bonds. Coefficient values for 100 atom/group and two correction factors have been derived from a training set of 1850 compounds. The parametrization procedure for different kinds of atoms was performed as follows: first, the atoms in a molecule were defined to different atom/group types based on SMARTS language, and the correction factors were determined by substructure searching; then, SASA for each atom/group type was calculated and added; finally, multivariate linear regression analysis was applied to optimize the hydrophobic parameters for different atom/group types and correction factors in order to reproduce the experimental log P. The correlation based on the training set gives a model with the correlation coefficient (r) of 0.988, the standard deviation (SD) of 0.368 log units, and the absolute unsigned mean error of 0.261. Comparison of various procedures of log P calculations for the external test set of 138 organic compounds demonstrates that our method bears very good accuracy and is comparable or even better than the fragment-based approaches. Moreover, the atom-additive approach based on SASA was compared with the simple atom-additive approach based on the number of atoms. The calculated results show that the atom-additive approach based on SASA gives better predictions than the simple atom-additive one. Due to the connection between the molecular conformation and the molecular surface areas, the atom-additive model based on SASA may be a more universal model for log P estimation especially for large molecules.     

烷烃中碳氢键离解能的估算及其应用

将烷烃中的C－H键看成氢原子H与烷基Ri相连接而成的Ri－H键，以烷基的 HOMO能级和氢原子的轨道能来关联Ri－H键的离解能BDE。研究表明，烷烃分子中 Ri－H键的离能BDE与烷基Ri的极化效应指数PEI（Ri）有良好的线性关系：BDE＝ c+dPEI(Ri)。所得方程具有良好的估算精度。烷基Ri极化效应指数PEI（Ri）在羟 基自由基与烷烃反应速度常数的定量相关中，也得到良好的应用。     

NHn(n=1～3)体系电子对内对间相关能的变化规律

众所周知,电子相关能问题是量子化学的瓶颈问题‘’‘．为了更深人地了解和认识电子相关能的轨道本质,建立P。St－HF理论校正模型,JS等”－”应用电子对内对间电子相关模式,指出国际著名量子     

多氯代二苯并呋喃在不同色谱柱上的气相色谱保留行为——定量结构-色谱保留关系(QSRR)的研究

 以一种拟原子的方式处理多氯代二苯并呋喃 (PCDFs)异构体中的苯环 ,将PCDFs异构体中的原子或基团分为 3类 ,即 :氯原子 (Cl) (记为“1”) ,氧原子 (O) (记为“2”)及拟原子 (B) (记为“3”)。在烷烃分子距边矢量的基础上 ,提出一种以基团为基准的分子距离边数矢量 (μ矢量 ) ,借助多元线性回归方法分别建立了多氯代二苯并呋喃在不同色谱柱上的色谱保留指数与表征其结构的 μ矢量间的定量结构 色谱保留关系 (QSRR)相关模型。各样本总体所建模型的相关系数均在 0 98以上。     

Determination of U/U atom ratio in uranium samples using liquid scintillation counting (LSC)

A correlation has been developed for the determination of ²³⁵U/²³⁸U atom ratio in uranium samples using liquid scintillation counting (LSC). The ²³⁵U/²³⁸U atom ratio determined by thermal ionization mass spectrometry (TIMS) was correlated to the ratio of (i) α-count rate and (ii) Cerenkov count rate due to ^234mPa in the sample; both measured by LSC. This correlation is linear over the range of ²³⁵U/²³⁸U atom ratio encountered in the nuclear fuel samples, i.e. the low enriched uranium (LEU) samples with ²³⁵U < 20 atom%. The methodology based on this correlation will be useful for the quick determination and verification of ²³⁵U/²³⁸U atom ratios in fuel samples using cost effective technique of LSC.     

The effect of electron correlation on the topological and atomic properties of the electron density distributions of molecules

The topological properties of the electron density and the properties of an atom in a molecule are calculated by means of second-order Møller-Plesset perturbation theory (MP2) and compared with the results of configuration interaction calculations (C12) which include all single and double substitutions from the Hartree-Fock reference configuration. A software package for analyzing the effects of electron correlation on the topological properties of the electron density of molecules is described. H₂CO is used to provide a numerical example and to indicate that the number of bond critical points is unaffected by the inclusion of electron correlation. Correlation leads to only a small shift in the positions of bond critical points and a small change in the electron density at bond critical points. It is further shown that the energy of an atom in a molecule can be calculated to an accuracy of 1 kcal/mol and the electron population of an atom to about 0.001e. A statistical method is used to show that the deviation of the MP2 correlation correction relative to the CI2 correlation correction for a variety of atomic properties is about 25%.