Synthesis,crystal structure,and density functional theory study of a new compound 4-(2-chlorobenzyl)-1-(5-fluoro-2-hydroxy-3-(thiomorpholinomethyl)phenyl [1,2,4]triazolo[4,3-a]quinazolin-5(4H)-one

In this paper, a novel SHP244 derivative 4-(2-chlorobenzyl)-1- (5-fluoro-2-hydroxy-3- [thiomorph-olinomethyl] phenyl)- [1,2,4]triazolo [4,3-a] quinazolin-5(4H)-one was synthesized through five steps. The single crystals were grown in a suitable solvent system (dichloromethane and methanol). Its structure was confirmed by ¹H NMR, ¹³C NMR spectroscopy, ESI-MS, m/z: 534.12[M-H] (MS), FT-IR, and X-ray single crystal diffraction. The crystal structure of the title compound was optimized by density functional theory (DFT) calculation. The crystal structure after X-ray single crystal diffraction was compared with the structure optimized by DFT calculation, and the result shows that the two structures are consistent. In order to explore certain physical and chemical properties, the frontier molecular orbital and molecular electrostatic potential of the title compound were analyzed. In addition, the docking of the title compound to the target protein was studied to understand the docking effect of the compound with the target protein.     

1,3-双[4-(4'-甲基)-氧化偶氮苯基-苯氧羰基]苯氧甲基-1,1,3,3- 四甲基二硅 氧烷的合成、晶体结构和液晶性能

合成了[CH3(C6H4)N2O(C6H4)COO(C6H4)OCH2Si(CH3)2]2O,经IR,1^HNMR和元素分析表征,并测定其单晶结构。结果表明,晶体属单斜晶系,空间群为P21/c,晶胞参数a=1.7557(1),b=1.0938(9),c=2.3300(1)nm,β=105.6(6)°,V=4.3116nm^3,Mr=855.07,Z=4,Dc=1.317g/cm^3,μ(CuKα)=6.335cm^-1,F(000)=900,最终的偏离因子R=0.0837,Rw=0.0913。该分子中,柔性的四甲基二硅氧烷嵌段与氧化偶介晶基团形成ABA结构齐聚物。两条刚性的介晶基链节的轴向几乎平行向上伸出。径长比(L/D)为4.23.该液晶化合物的要变温度K174.4N226.8Ⅰ.通过结构分析,讨论了该类化合物的结构对液晶相变行为的影响。     

三维聚合物双(三丁基锡)戊二酸酯的合成及晶体结构研究

用三丁基氯化锡与戊二羧酸二钠以2:1摩尔比反应,合成了双（三丁基锡）戊二羧酸酯,并用元素分析、红外光谱、核磁共振氢谱及X-射线单晶衍射进行了表征和结构测定。X-射线单晶衍射法测定表明,化合物属单斜晶系,空间群为Cc,晶胞参数:a=13.984（3）,b=16.164（3）,c=16.894（3）A,β=107.457（3）°,V=3642.9（11）A3,Z=4,C29H60O4Sn2,Dc=1.251g/cm3,μ=1.394 mm-1,R=0.0500,wR=0.0874,F（000）=1416。晶体结构中存在2种化学环境不同的三角双锥构型的锡原子,由于配体中2个羧基在不同方向的交联作用,使化合物呈现三维立体骨架结构,并且在骨架结构中存在沿a、b、c轴3个方向伸展的规则的大环直孔道。     

High-pressure delta-Al(OH)3 and delta-AlOOH phases and isostructural hydroxides/oxyhydroxides: new structural insights from high-resolution 1H and 27Al NMR

In order to shed light on the proton distributions and order/disorder in high-pressure delta-Al(OH)3 and delta-AlOOH phases, two-dimensional, high-resolution 1H CRAMPS (FSLG)-MAS NMR and 27Al 3QMAS NMR spectra have been obtained. For delta-Al(OH)3, the 1H CRAMPS-MAS NMR revealed two peaks with an intensity ratio close to 2:1. The 27Al MAS and 3QMAS NMR suggest a single Al site with a well-defined local structure. For delta-AlOOH, the 1H and 27Al NMR indicate the presence of a single H and Al site each. These results are consistent with crystal structures refined from X-ray diffraction. For comparison, 1H MAS and CRAMPS-MAS NMR spectra were also obtained for several other hydroxides/oxyhydroxides, including In(OH)3 and InOOH that have similar structures to delta-Al(OH)3 and delta-AlOOH, respectively. These data not only provide additional insights into the proton distributions in these important crystal structure classes but also together provide a better defined quantitative correlation between 1H chemical shift and hydrogen-bonding O...O distance.     

An experimental and theoretical study of the structure of Lamotrigine in its neutral and protonated forms: evidence of Lamotrigine enantiomers

The energies, geometries, and NMR chemical shifts have been calculated at the B3LYP/6-311++G(d,p) level for 17 structures of the anticonvulsant drug Lamotrigine and 29 structures of protonated Lamotrigine, including tautomers and E/Z isomers of the imino groups. The calculations were compared with solid state (X-ray and CPMAS NMR) and solution experimental results both reported in the literature and determined in this work. The conclusion is that Lamotrigine exists as the diamino tautomer and that its protonation takes place on the N2 atom. Using ABTE and/or deuterated ABTE as chiral solvating agent, it has been demonstrated for the first time by NMR in solution that Lamotrigine is a racemate of rapidly interconverting enantiomers. The crystal structure of two new solvated salts of Lamotrigine, both saccharinates, has been determined. Both salts present the same arrangement in chains of Lamotrigine and saccharinate joined by hydrogen bonds and stacking interactions. No isostructurality is present because of the different arrangement of the chains in both crystal structures.     

Synthesis,structural analysis,spectral investigations,and DFT calculations of 1‐(3‐amino‐4‐thia‐1,2‐diazaspiro[4.11]hexadec‐2‐en‐1‐yl)ethan‐1‐one

1‐(3‐amino‐4‐thia‐1,2‐diazaspiro[4.11]hexadec‐2‐en‐1‐yl)ethan‐1‐one was synthesized and experimentally characterized by using FT‐IR, ¹H NMR, ¹³C NMR, and UV–Vis spectroscopy. The structure of the compound was confirmed by single‐crystal X‐ray diffraction. In the crystal structure, the molecules are linked by pairs of N‐H⋯N hydrogen bonds, forming centrosymmetric dimers with the graph‐set motif. The water molecule also plays an important role in the stabilization of the crystal structure, bridging the dimers to form a two‐dimensional supramolecular network. The molecular geometry, frontier molecular orbitals, vibrational frequencies, electronic properties, and molecular electrostatic potential were calculated using density functional theory (DFT) with the B3LYP/6‐311G(d,p) basis set. Geometric parameters, vibrational assignments, and electronic properties such as calculated energies, excitation energies, and oscillator strengths were compared with the experimental data, and it was seen that the theoretical results support the experimental parameters.     

The structure at 150 K of a highly disordered pyrazole: 3-trifluoromethyl-5-(2-thienyl)-pyrazole

The X-ray analysis at 150 K of the title compound, C₁₈H₅N₂F₃S, revealed disorder of the thienyl ring and the CF₃ group in the two independent molecules. The disorder affecting the thienyl substituent consists of two alternative orientations, the E and Z with regard to the pyrazole ring. The tautomer present in the crystal is the 1H-3-trifluoromethyl-5-(2-thienyl)-pyrazole and NMR data and DSC experiments, both in the solid state and in solution, are discussed in the light of these results. The secondary structure consists of dimers formed by the two independent molecules linked by N–HH hydrogen bonds.     

Templated Growth of InP Nanocrystals with a Polytwistane Structure

We have synthesized InP nanocrystals of an unprecedented crystal phase at low temperature (35–100 °C) by templated growth of InP magic‐sized clusters. With the addition of stoichiometric equivalents of P(SiMe₃)₃ to the starting cluster, we demonstrate nanocrystal growth mediated through a partial dissolution and recrystallization pathway. This growth process was monitored using a combination of in situ UV/Vis and ³¹P NMR spectroscopy, revealing the intermediacy of smaller cluster species of higher symmetry. The nanocrystals that result from this templated growth exhibit a crystal structure that is neither zincblende nor wurtzite, and instead is derived from the original cluster. This structure is best described as a 3D polytwistane phase as deduced from a combination of X‐ray diffraction, Raman, and solid‐state NMR spectroscopy methods.     

低熔点晶体叠氮二乙基铝的合成和证明

叠氮二乙基铝（DEAA)是叠氮有机铝化合物中比较重要的一个化合物,但对DEAA的合成报道很少,还没有分离出纯的DEAA的报道。对它的研究有着重要的理论意义和应用价值。DEAA用作叠氮化试剂可用于多种叠氮化反应^[1-3];作为MOCVD前体物,由DEAA可制得性能优良的纳米级AIN材料,如AIN微晶薄膜^[4-6]和AIN粉末材料;DEAA是高含能材料,在国防和空间技术领域有着潜在的应用前景。文献报道的DEAA的合成方法按原料可分为三种^[7-10],其中以叠氮化钠和氯化二乙基铝（DEAC）为原料的合成方法应用较广,得到的DEAA为无色透明液体,熔点为－130℃^[11]。但笔者曾和到过固体DEAA^[12]。因此,本文将主要就DEAA的形态问题展开研究。     

新型2,4-二取代四氢吡咯-3-羧酸衍生物的合成

N-三甲硅甲基苯甲醛亚胺为非稳定型亚甲胺基叶立德前体,在磷酸催化下与取代噁唑烷酮烯烃经1,3-偶极环加成反应合成了10个具有cis-trans立体结构的新型2,3,4-三取代四氢吡咯-3-羧酸衍生物（3a~3j）,收率65%~75%,其结构经¹H NMR, ¹³C NMR和HR-MS表征。3b的立体结构经X-单晶衍射确证。     

An NMR and X-ray study of the structure of the azo coupling product of 4-dimethylaminopent-3-en-2-one and benzenediazonium-tetrafluoroborate

4-Dimethylaminopent-3-en-2-one reacts with two molecules of benzenediazonium-tetrafluoroborate to give compound 1. The structure of this compound was determined by means of X-ray analysis of its crystal and 1H, 13C and 15N NMR spectra of its solution in CDCl3. The molecule of this compound contains one azo group and one hydrazone group. The substance exists, both in crystal form and in solutions of concentrations above 0.1 mol l(-1), in the form of a dimer, in which the pair of molecules are bound by two hydrogen bonds N-H...N. On diluting the solution, the dimers decompose, the two forms being in an equilibrium that is rapid on the NMR time scale.     

Mercury(II) cyanide complexes of thioureas and the crystal structure of [(N-methylthiourea)2 Hg(CN)2]

Mercury(II) cyanide complexes of thioureas (Tu), N-methylthiourea (MeTu), and N,N′-dimethylthiourea (DmTu)) have been prepared and characterized by IR and NMR (¹H and ¹³C) spectroscopy, and the crystal structure of one of them was determined by X-ray crystallography. An upfield shift in ¹³C NMR and downfield shifts in ¹H NMR are consistent with the sulfur coordination to mercury(II). The appearance of a band around 2200 cm^?1 in IR and a resonance around 145 ppm in ¹³C NMR indicates the binding of cyanide to mercury(II). The NMR data show that the [(Thione)₂Hg(CN)₂] complexes are stable in solution and undergo no redistribution reactions. In the crystal structure of the title complex, mercury atom is coordinated to two thione sulfur atoms of MeTu and to two cyanide carbon atoms in a distorted tetrahedral mode with the bond angles in the range of 90.2(2)°–169.3(3)°.     

Synthesis and Structure of Complexes of the Diethyl Ester of 2-Dimethylamino-2-oxoethylphosphonic Acid with Lanthanide Nitrates

The lanthanide complexes LnL 2 (NO 3 ) 3 ( 3a-g ) are obtained where Ln is La, Sm, Yb, Er, Ce, Eu, Gd, and L is the diethyl ester of 2-dimethylamino-2-oxoethylphosphonic acid [(C 2 H 5 O) 2 P(O)CH 2 CON(CH 3 ) 2 ] 1 . They are characterized by elemental analysis, i.r. and NMR spectroscopy. The crystal structure of 3a is determined by single crystal X-ray diffraction. The complex is found to crystallize in the triclinic space group P 1 with a = 8.4220(17) Å, b = 11.123(2) Å, c = 17.560(4) Å, f = 87.20(3);, g = 82.27(3);, n = 76.89(3);, V = 1587.3(5) Å 3 , Z = 2, calcd = 1.614 mg/m 3 , R = 0.047, R w = 0.107, S = 1.034 for 5762 reflections with I > 2 (I). The structure contains monomeric units of the complex with the lanthanum atom coordinated by 10 oxygen atoms, six of them from the three bidentate nitrate ions and four from the two phosphonate ligands. The coordination is realized by both phosphoryl and amide-carbonyl oxygen atoms. The stereochemistry of the starting ligand 1 is investigated by NMR spectroscopy.     

Synthesis,crystal structures,spectral FT‐IR,NMR and UV–Vis investigations and Hirshfeld surface analysis of two new 2‐hydroxyethyl‐substituted N‐heterocyclic carbene precursors

This study discusses the synthesis of two new 2‐hydroxyethyl substituted N‐heterocyclic carbene (NHC) precursors. The NHC precursors were prepared from 1‐(alkyl/aryl)benzimidazole and alkyl halides. They were characterized using ¹H NMR, ¹³C NMR, FT‐IR, UV–Vis spectroscopy, and elemental analysis techniques. Molecular and crystal structures of 1 and 2 were determined using the single‐crystal X‐ray diffraction method. Crystal structure of the compounds features NHC precursors and chloride anions. Additionally in 2 , the asymmetric unit has a water molecule, which forms a tetrameric chloride‐hydrate assembly with the chloride anion. The chloride anions play an important role in the stabilization of crystal structures to form a two‐dimensional supramolecular architecture. The 3D Hirshfeld surface and the associated 2D fingerprint plots were also drawn to gain insights into the behavior of the interactions in the compounds.     

Design,Synthesis and Structural Analysis of New Macrocycles Containing Dispiro-1,3-dioxane Units

The synthesis and the structure of new macrocycles containing semiflexible dispiro-1,3-dioxane units is reported. The structural analysis of the compounds is performed by high field NMR spectra, mass spectrometry investigations (MALDI, ESI-MS) and the solid state molecular structure obtained for two compounds by single crystal X-ray diffractometry. The dynamics of the macrocycles promoted by the flipping of the middle cyclohexane ring of the dispirane units is investigated using low temperature NMR experiments.

New macrocycles containing dispiro-1,3-dioxane units were investigated by NMR, X-ray diffractometry and mass spectrometry     

The reaction of dihydridotetrakis(triphenylphosphane)ruthenium(II) with methyl acrylate. Crystal structure of bis(methylacrylate)bis(triphenylphosphane)(aqua)ruthenium(0)

The complex H₂Ru(PPh₃)₄ reacts with methyl acrylate to give bis(methylacrylate)bis(triphenylphosphane)ruthenium(0). Temperature-dependent NMR spectra show that the complex exists in two isomeric forms in solution. The major form (ca. 74%) has one methyl acrylate ligand η²-coordinated and the other η⁴ -coordinated as a 1-oxabutadiene ligand. This complex reacts with water to give the monoaqua adduct, the crystal structure of which is reported.     

新型多取代Tr(o)ger's base衍生物的合成及其晶体结构

以邻氨基二苯甲酮为原料,经两分子环化缩合反应制得6,12-二芳基二苯并[b,f][1,5]二氮杂环辛四烯(2a~2d);2a~2d经LiAlH4还原制得6,12-二芳基-5,6,11,12-四氢二苯并[b,f][1,5]二氮杂环辛(3a~3d);3a~3d与醛(或酮)反应,合成了一系列新型的多取代Tr(o)ger's base衍生物(4a~4d和5a~7a),其结构经1H NMR, 13C NMR, HR-MS(ESI)和X-射线单晶衍射表征.通过分析架桥前后3a(CCDC: 1498564)和6a(CCDC: 1498555)的晶体结构,解释了该类化合物1H NMR中NCH质子及桥上取代基质子裂分的原因,并进一步证实了4~7为非C2轴对称结构.     

Solution NMR evidence for symmetry in functionally or crystallographically asymmetric homodimers

A recurrent theme of many structural studies of homo-oligomeric protein systems is concerned with verification that the conformation observed in a crystal represents the functionally relevant structure. An asymmetric conformation adopted by two chemically identical subunits in homo-oligomers can represent an intrinsic property of a protein or be an artifact induced by crystal packing forces. Solution NMR studies can distinguish between these two possibilities. Using methyl-based NMR spectroscopy, we provide evidence for symmetry in the absence of ligands in several homodimeric proteins that are either asymmetric functionally and/or adopt different conformations of the two subunits in available X-ray structures.     

Two New Lead(II) Coordination Polymers with (Substituted) Bipyridine and Auxiliary Nitrate Ligands

The reaction of lead(II) nitrate with 4,4′‐bipyridine (4,4′‐bpy) and 4,4′‐dimethyl‐2,2′‐bipyridine (4,4′‐dm‐2,2′‐bpy) or 5,5′‐dimethyl‐2,2′‐bipyridine (5,5′‐dm‐2,2′‐bpy) resulted in the fomation of single crystals of [Pb₂(4,4′‐bpy)(5,5′‐dm‐2,2′‐bpy)₂(NO₃)₄] ( 1 ) and [Pb₃(4,4′‐bpy)₂(4,4′‐dm‐2,2′‐bpy)₂(NO₃)₆] ( 2 ). The new compounds have been characterized by single‐crystal X‐ray diffraction structure analysis as well as through elemental analysis, IR, ¹H‐NMR and ¹³C‐NMR spectroscopy and their stability has been studied by thermal analysis. In the crystal structure of ( 1 ) formula‐like dimers are further connected to a 2‐D network through the auxiliary nitrate ligands. The crystal structure of ( 2 ) exhibits two crystallographically independent Pb^II central atoms (in a ratio of 1:2). With the aid of the 4,4′‐bpy and the nitrate ions, a 3‐D polymeric structure is achieved.     

A Two‐Tailed Phosphopeptide Crystallizes to Form a Lamellar Structure

The crystal structure of a designed phospholipid‐inspired amphiphilic phosphopeptide at 0.8 Å resolution is presented. The phosphorylated β‐hairpin peptide crystallizes to form a lamellar structure that is stabilized by intra‐ and intermolecular hydrogen bonding, including an extended β‐sheet structure, as well as aromatic interactions. This first reported crystal structure of a two‐tailed peptidic bilayer reveals similarities in thickness to a typical phospholipid bilayer. However, water molecules interact with the phosphopeptide in the hydrophilic region of the lattice. Additionally, solid‐state NMR was used to demonstrate correlation between the crystal structure and supramolecular nanostructures. The phosphopeptide was shown to self‐assemble into semi‐elliptical nanosheets, and solid‐state NMR provides insight into the self‐assembly mechanisms. This work brings a new dimension to the structural study of biomimetic amphiphilic peptides with determination of molecular organization at the atomic level.