Vacuum ultraviolet absorption spectra of simple amides

Vacuum ultraviolet absorption spectra of six simple amides were measured. It was found that the positions of the firstπ→π ^* transition bands shift appreciably by the substitutions of methyl groups for hydrogen atoms of the NH₂ and\(\begin{gathered} | \hfill \\ H - C = O \hfill \\ \end{gathered} \) groups. A general tendency is that the substitution in the NH₂ group shifts the band toward longer wavelengths, in the\(\begin{gathered} | \hfill \\ H - C = O \hfill \\ \end{gathered} \) group however towards shorter wavelengths. This was explained satisfactorily by considering the nature of the band (intramolecular charge-transfer band) and the hyperconjugation effect of the methyl group.     

Proton hydration in aqueous solution: Fourier transform infrared studies of HDO spectra

This paper attempts to elucidate the number and nature of the hydration spheres around the proton in an aqueous solution. This phenomenon was studied in aqueous solutions of selected acids by means of Fourier transform infrared spectroscopy of semiheavy water (HDO), isotopically diluted in H(2)O. The quantitative version of difference spectrum procedure was applied for the first time to investigate such systems. It allowed removal of bulk water contribution and separation of the spectra of solute-affected HDO. The obtained spectral data were confronted with ab initio calculated structures of small gas-phase and polarizable continuum model (PCM) solvated aqueous clusters, H+(H2O)n, n=2-8, in order to help in establishing the structural and energetic states of the consecutive hydration spheres of the hydrated proton. This was achieved by comparison of the calculated optimal geometries with the interatomic distances derived from HDO band positions. The structure of proton hydration shells outside the first hydration sphere essentially follows the model structure of other hydrated cations, previously revealed by affected HDO spectra. The first hydration sphere complex in diluted aqueous solutions was identified as an asymmetric variant of the regular Zundel cation [The Hydrogen Bond: Recent Developments in Theory and Experiments, edited by P. Schuster, G. Zundel, and C. Sandorfy (North-Holland, Amsterdam, 1976), Vol. II, p. 683], intermediate between the ideal Zundel and Eigen structures [E. Wicke et al., Z. Phys. Chem. Neue Folge 1, 340 (1954)]. Evidence was found for the existence of strong and short hydrogen bonds, with oxygen-oxygen distance derived from the experimental affected spectra equal 2.435 A on average and in the PCM calculations about 2.41-2.44 A. It was also evidenced for the first time that the proton possesses four well-defined hydration spheres, which were characterized in terms of hydrogen bonds' lengths and arrangements. Additionally, an outer hydration layer, shared with the anion, as well as loosely bound water molecules interacting with free electron pairs of the central complex were detected in the affected spectra.     

Spectroscopic studies of the monosubstituted amides. VI. Neutron inelastic scattering spectra of N-methyl acetamide

We report the determination of the barriers to methyl group rotation in N-methyl acetamide. These were, for N-methyl V₃ = 590 cm^?1, and for C-methyl V₃ = 670 cm^?1. Some previous spectral assignments of this compound have been confirmed and one new band at about 160 cm^?1 is shown to involve the motion of both methyl groups.     

Reactions of OH and NO radicals with 1,1-dichloroethylene in argon matrices. FTIR and theoretical studies

HONO/1,1-dichloroethylene/Ar matrices were subjected to UV radiation (lambda > 340 nm) from a medium pressure mercury lamp. The products of the photolysis were studied experimentally by means of FTIR spectroscopy and theoretically using the ab initio MP2 method. Two conformers of 2-nitroso-2,2-dichloroethanol molecule have been identified as the final products of the double addition reaction of the OH, NO radicals to 1,1-dichloroethylene. The additional reactive species observed in the matrix is tentatively identified as an 1,1-dichloro-2-hydroxyethyl radical, an intermediate formed by single addition of OH to 1,1-dichloroethylene. The three photoproducts have been identified and observed for the first time. The identities of the products have been justified by comparison with the experiments with deuterated DONO and by performing concentration and annealing studies as well as by reference to the spectral data of related molecules. The results of the quantum mechanical calculations confirmed both the assignment of the new molecules and mechanism of the reaction observed in our experiment.     

Comparative studies for selective deprotection of the N-arylideneamino moiety from heterocyclic amides: kinetic and theoretical studies. Part 2

4-Benzylideneamino-1,2,4-triazine-3,5(2H,4H)-diones (2-5), 6-styryl-1,2,4-triazine-3,5(2H,4H)-dione (6), and 6-styryl-2,3-dihydro-3-thioxo-1,2,4-triazin-5(4H)-one (7) were synthesized and pyrolyzed in the gas phase. The kinetic effect of changing the substituent on the triazine ring from hydrogen to methyl, phenyl, and styryl was measured. Analyses of the pyrolyzates of 2-5 showed the elimination products to be benzonitrile and the triazine fragment, while the pyrolyzates of 6 and 7 reveal the formation of cis- and trans-cinnamonitriles. Theoretical study of the pyrolysis reactions of 2-5 using an ab initio SCF method was investigated.     

Comparative studies for selective deprotection of the N-arylideneamino moiety from heterocyclic amides: kinetic and theoretical studies

The kinetics, product analysis and theoretical studies for selective deprotection of N-arylideneamino pyridone, pyrimidinone and triazinone systems were carried out. Their reactivities were compared with each other and with related compounds previously studied. This reaction represents an efficient, clean and general synthetic procedure for the protection and selective synthesis of potential biologically active pyridines, pyrimidines and triazines and their derivatives.     

Combined theoretical and FTIR spectroscopic studies on hydrogen adsorption on the zeolites Na-FER and K-FER

The interaction between molecular hydrogen and the alkali-metal-exchanged zeolites Na-FER and K-FER at a low temperature was investigated by combining variable-temperature infrared spectroscopy and theoretical calculations by using a periodic DFT model. The experimentally determined values of standard adsorption enthalpy, DeltaH degrees , were -6.0 (+/-0.8) and -3.5 (+/-0.8) kJ mol(-1) for Na-FER and K-FER, respectively. These results were found to be in agreement with corresponding DeltaH degrees values obtained from calculations on the periodic model. Two types of alkali-metal cation sites in FER were found: channel intersection sites and channel wall sites. Calculations showed a similar interaction energy for both site types, and similar structures of adsorption complexes. Up to two dihydrogen molecules can be physisorbed on the alkali-metal cation located on the intersection of two channels, while only one H2 molecule is physisorbed on the cation at the channel wall site. The adsorption enthalpies of H2 on alkali-metal-exchanged FER are significantly smaller than those found previously for the MFI-type zeolites Na-ZSM-5 and K-ZSM-5, which is likely due to a difference in the alkali-metal cation coordination in the two zeolite frameworks.     

Combined experimental and theoretical studies on the vibrational spectra of 2-quinolinecarboxaldehyde

Combined experimental and theoretical studies have been performed on the structure and vibrational spectra (IR and Raman spectra including far region) of 2-quinolinecarboxaldehyde. Hartree-Fock (HF) and density functional B3LYP calculations have been employed with the 6-311++G(d,p) basis set for investigating the structural and spectroscopic properties of two possible aldehyde rotamers of 2-quinolinecarboxaldehyde. When the O atom of the aldehyde is farther away than the nitrogen atom of the quinoline, 2-quinolinecarboxaldehyde has the lowest possible energy, and thus is in its ground state. The computed vibrational frequencies of this lowest energy rotamer agree also slightly better than those of the higher energy rotamer with the experimental frequencies after the computed frequencies are scaled.     

Vibrational spectra, NMR and theoretical studies of the enantiomers and rotamers of alpha-cypermethrin

NMR, infrared and Raman vibrational spectra of alpha-cypermethrin have been measured at room temperature. Infrared spectra were also recorded to low temperature. The spectra were analyzed by means of ab initio calculations. The conformational space of both enantiomers and some rotamers A, B and C of alpha-cypermethrin has been scanned using molecular dynamics and complemented with functional density calculations that optimize the geometry of the lowest-energy conformers of each species as obtained in the simulations. The vibrational frequencies and the 1H and 13C NMR chemical shifts were assigned using functional density calculations. The molecular electrostatic potential maps were obtained and analyzed.     

Electronic absorption spectra of hydrogen bonded amides

The vacuum ultraviolet absorption spectra of various hydrogen bonded amides were measured at various temperatures and concentrations. It was found that the characteristic absorption bands of amides, which appear at 180–190 m, greatly change by hydrogen bonded dimer formation and moreover their changes are sensitive to the relative orientation of the monomers. That is to say, they shift to shorter wavelengths by about 6000 cm^–1 by the hydrogen bonded ring dimer formation and shift to longer wavelengths by about 3000 cm^–1 by the hydrogen bonded chain dimer formation. The theoretical consideration on the energy level splittings due to hydrogen bonded dimer formation explained satisfactorily these observations. The results seem to be important in connexion with the determination of the configurations of polymers which contain peptide bonds as a unit.

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Zusammenfassung Vakuum-UV-Absorptionsspektren verschiedener Amide, die H-Brücken ausbilden, wurden vermessen. Die charakteristische Bande der Amide bei 180–190 m wird durch H-Brücken in Abhängigkeit von der Form des gebildeten Dimeren verschoben: so ist die Verschiebung im Falle der Ringbildung +6000 cm^–1, im Falle linearer Verkettung –3000 cm^–1. Dies Phänomen wird theoretisch erklärt. Die Ergebnisse sind für die Strukturaufklärung von polymeren Amiden von Bedeutung.

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Résumé Les spectres d'absorption U.V. dans le vide ont été mesurés pour différentes amides formant des liaisons hydrogène. La bande caractéristique des amides vers 180–190 m. est déplacée lors de la formation d'une liaison hydrogène: pour des dimères ce déplacement est de +6000 cm^–1 lors de la formation d'un composé cyclique et de –3000 cm^–1 lors de la formation d'un composé linéaire. On explique théoriquement ce phénomène. Les résultats ont une signification pour la compréhension de la structure des amides polymères.

     

Vibrational spectra of cyclopentadienylphosphine: infrared and theoretical studies from DFT anharmonic potentials

Both experimental and theoretical infrared investigations of cyclopentadienylphosphine (CpP) are reported. The infrared spectra (3500-500 cm(-1)) in the gas phase have been recorded at 0.5 cm(-1) resolution. Infrared absorptions bands of the two lowest stable conformers were observed and assigned. Average integrated intensities of isolated and overlapping vibrational bands were also determined experimentally. The vibrational frequencies of the CpP system and its P-dideuterated isotopologue have been calculated by means of density functional theory. The Becke exchange functional and Lee-Yang-Parr correlation functional method with a combination of the two basis sets, namely 6-31+G(d,p) and the correlation-consistent triple-zeta cc-pVTZ set of Dunning, were used. Hybrid B3LYP/B3LYP//cc-pVTZ/6-31+G(d,p) anharmonic frequencies of the fundamental, overtone, and combination transitions were calculated in the 3500-200 cm(-1) area with the use of a variational approach, implemented in the P_Anhar_v1.1 code, to assign the experimental data for each conformer.     

The structures and electronic absorption spectra of substituted phenyldiacetylenes: experimental and theoretical studies

The results of experimental and theoretical investigation of the electronic absorption spectra of substituted phenyldiacethylenes are presented. The bands in the experimental spectra were assigned in detail using quantum chemical calculations of the electronic structures and spectra of the molecules. The influence of the interaction of the substituents on the spectral parameters of the systems under study was analyzed. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 1947–1953, October, 2007.     

Hydration of the hydrogen ion in aqueous solutions from intensity of the OD band of HDO

The OD band of HDO has been studied in partly deuterated aqueous solutions of acids: hydrochloric, sulfuric, nitric, trifluoroacetic, and perchloric. Composition of the hydrogen ion is determined. Observations are made on hydration of the perchlorate and trifluoroacetate ions.     

Ab initio calculations, FTIR and raman spectra of 2,3-difluorobenzonitrile.

Geometry, vibrational frequencies, atomic charges and several thermodynamic parameters (the total energy, the zero point energy, the rotational constants and the room temperature entropy) were calculated using ab initio quantum chemical methods for 2,3-difluorobenzonitrile molecule. The results were compared with experimental values. With the help of two specific scaling procedures, observed FTIR and Raman vibrational frequencies were analysed and assigned to different normal modes of the molecule. The error obtained was in general very low. Other general conclusions have also been deduced.     

Experimental and theoretical studies of the vibrational spectra of cis-1-bromo-2-fluoroethene

The gas-phase infrared spectrum of cis-1-bromo-2-fluoroethene has been studied at low resolution in the range 200-6500 cm(-1), leading to a complete assignment of the fundamentals, except the lowest vibrational mode nu9 predicted at 167 cm(-1). The remaining vibrational structure has been mainly interpreted in terms of first overtone or two quanta combination bands. Isotopic (79/91)Br shift has been observed only in the nu8 fundamental. The equilibrium structure and the quadratic force field have been investigated theoretically at CCSD(T) level of theory employing Dunning's correlation consistent triple-zeta basis set. Cubic and semidiagonal quartic force field have been calculated using second-order M?ller-Plesset perturbation theory and Ahlrich' split valence (SV) contracted basis set. After a minor scaled quantum mechanical (SQM) adjustment of the quadratic force constants, the vibrational analysis, based on the second-order perturbation theory, has been carried out with the calculated force constants.     

Reactions of d0 group 4 amides with dioxygen. Preparation of unusual oxo aminoxy complexes and theoretical studies of their formation

Reactions of d0 amides M(NMe2)4 (M = Zr, 1; Hf, 2) with O2 have been found to yield unusual trinuclear oxo aminoxide complexes M3(NMe2)6(mu-NMe2)3(mu3-O)(mu3-ONMe2) (M = Zr, 3; Hf, 4) in high yields. Tetramethylhydrazine Me2N-NMe2 was also observed in the reaction mixtures. Crystal structures of 3 and 4 have been determined. Density functional theory calculations have been performed to explore the mechanistic pathways in the reactions of model complexes Zr(NR2)4 (R = H, 5; Me, 1) and [Zr(NR2)4]2 (R = H, 5a; Me, 1a) with triplet O2. Monomeric and dimeric reaction pathways in the formation of the Zr complex 3 are proposed.     

Vibrational spectra of 1-methylthymine: matrix isolation, solid state and theoretical studies

The infrared spectra of 1-methylthymine (1-MeT) in argon and nitrogen cryogenic matrices are presented, for the first time. The molecular structure, conformations, vibrational frequencies, infrared intensities and Raman scattering activities of 1-MeT have been calculated by the DFT(B3LYP), MP2 and HF methods using the D95V** basis set. The theoretically predicted intensity pattern of the IR and Raman bands has proved to be of great help in assigning the experimental spectra. Rigorous normal coordinate analysis has been performed, at each level of theory. The unequivocal and complete vibrational assignment for 1-MeT has been made on the basis of the calculated potential energy distribution (PED). Comparison of the experimental matrix isolation spectra with the theoretical results has revealed that the B3LYP method is superior to both the MP2 and HF methods in predicting the frequencies of uracil derivatives. The MP2 method consistently underestimates the frequencies of the out-of-plane gamma(C=O) and gamma(C-H) bending modes, while the HF method yields the reverse order of the frequencies of two nu(C=O) stretching vibrations. Investigation of the frequency shift of several bands, on passing from matrix isolation to solid state spectra, has provided information on the strength of intermolecular hydrogen bonding in the crystal of 1-MeT. Several ambiguities in the earlier assignments of the vibrational spectra of polycrystalline 1-MeT have been clarified.